BlTCONS00086231 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00086231
Unique NameBlTCONS00086231
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000105:379615..381302+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00086231 ID=BlTCONS00086231|Name=BlTCONS00086231|organism=Branchiostoma lanceolatum|type=mRNA|length=1688bp|location=Sequence derived from alignment at Sc0000105:379615..381302+ (Branchiostoma lanceolatum)
CTTTCATCATCATCAACATGGCTGCCGCTAACCAAGAACTCCACGACAGC GCAGTTCGTCCTCGTTTCTACCGAGACGAGAGCTATCTGCGCGGGTTTCT TGGAACTGTGGGTGACTTACAGAAGGCTGAGGAACTGCAGGATGTCGTCC TTGAAGTCCAAGACCGGCGGTTTCCCTGCCATCGGCTTGTTTTGTCTGCT GCCAGCCCCTACTTCAGGGCAATGTTTACGAATGGCATGGCGGAAAGTCG CCAGAAGACTGTTGTTTTACAGGTAGGGATTGAGCAACTTTTAGAGTAAT TTGAGAGCTACGTTTATAATCAAAGGAAGGCTAGGTATCAACAAAGCCAG CAATACATCAAGAGAAAAGAATGCTTCAACGTCCTTCTGATATTTCAACC TAGCATAATTCGCCCCCCTCCCCTTTTCCCGTGTGTGTGCACGTGCAGTG TGTGTGTGTGCTTTGCTGTCAAATTTTCTAGCTTGCTGAGCAGGTTTATG CAGGCAGTTAAGGCATGCAGGATTATTTGATATGCATTTAGATTGAATAT GCATGTAAAGAGAGACTAGTGCATTATGTTTGATGGATTAAAAAAAGCAC ACACATATATATCAATAGTGTAACAGTGGGGATCAACCTCCACTAACTGA CCGGCCTAACCGGGTTCTGACCTTATAGCCTAGCGAATTGAATTCCCAAG CCGTGCGGATTGGGATCTGCGTGAGTTCGAATCCTGGGAGCGGCGTACTC GCCTCTTTTGTGTTTTTACAGTGGTTCCCACACCTGGAATCGAACCCGGG CCTTGGCGGTGAGAGCGCCAAATCCTCTTTGGGTTTTTACTACAATTATA TGCAAACAGGAAGTGGGGAGGGGGGCGATTGTGAGCCATGAATAAATTGC ATGGTTATTGCAAAATGTGGTATAAAGACATTTTTATATTGTCCTGCAGG GTTTGGATGCAGCTATGTTTGGGGAGATCCTGAGTTACATCTACTCGGGA ATCCTCCACATGTCCCTGGACAAAGTGCAGCCCCTGTACCAGGCAGCTGA CCTCCTCCAACTGGACTATGTGAGAGACACCTGCAGCAGCTATATGGCCA TGAACTTGGAGCGCTCCACCTGTGTGGACATGTACAAGTTTGCTGATGTC TTCTCTGCAAATATTGTCCTGAGCCGTTGTCAACAGTGGATCTGCAGGCA CTTTGCTGAGGTTGGTCTTCTTTAGAATTGACCAAAGTGTTGTAAATTAC ACAGAGCTCCGGTGTTTGAGGAGAGCCACATGTACACGTCAAGCACAATC AAGAACCCGTCACAGTTATTGATAAGCATCCTTTTCTGTGTGAGGGGATC ATAAAATTGTATTACGCAGCTTGTAGGTACCGCTCACGACTGGATTGTAA CCCCTGATTATGTAATTCAACCCAAAAAATACTTGATATGATGGTGATAT GAACAAACACAATGTTGGCAACTGTGAAAAGCTTTTCATGAGCTAGAATT TATCAAGGCATATGTAAAAATACTTTAAAGTACTTTGTGCCTTCACAGTT TGTTTCCAGTGAGGAGTTTTGCAGGCTGAGTGTGAATCAGCTGACTGAGA TCATCAGCCACGATGAGCTGGATGTTAAAGAGGAGACAACAGTGTGGGAG GCTGTGGTGAGATGGTTGCAGCACAGCAGGGAGGACAG

Coding sequence (CDS) from alignment at Sc0000105:379615..381302+

>BlTCONS00086231 ID=BlTCONS00086231|Name=BlTCONS00086231|organism=Branchiostoma lanceolatum|type=CDS|length=672bp|location=Sequence derived from alignment at Sc0000105:379615..381302+ (Branchiostoma lanceolatum)
CTTTCATCATCATCAACATGGCTGCCGCTAACCAAGAACTCCACGACAGC
GCAGTTCGTCCTCGTTTCTACCGAGACGAGAGCTATCTGCGCGGGTTTCT
TGGAACTGTGGGTGACTTACAGAAGGCTGAGGAACTGCAGGATGTCGTCC
TTGAAGTCCAAGACCGGCGGTTTCCCTGCCATCGGCTTGTTTTGTCTGCT
GCCAGCCCCTACTTCAGGGCAATGTTTACGAATGGCATGGCGGAAAGTCG
CCAGAAGACTGTTGTTTTACAGGGGTTTGGATGCAGCTATGTTTGGGGAG
ATCCTGAGTTACATCTACTCGGGAATCCTCCACATGTCCCTGGACAAAGT
GCAGCCCCTGTACCAGGCAGCTGACCTCCTCCAACTGGACTATGTGAGAG
ACACCTGCAGCAGCTATATGGCCATGAACTTGGAGCGCTCCACCTGTGTG
GACATGTACAAGTTTGCTGATGTCTTCTCTGCAAATATTGTCCTGAGCCG
TTGTCAACAGTGGATCTGCAGGCACTTTGCTGAGTTTGTTTCCAGTGAGG
AGTTTTGCAGGCTGAGTGTGAATCAGCTGACTGAGATCATCAGCCACGAT
GAGCTGGATGTTAAAGAGGAGACAACAGTGTGGGAGGCTGTGGTGAGATG
GTTGCAGCACAGCAGGGAGGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00086231BlTCONS00086231-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00086231-exon-Sc0000105-1564993656:379615..379886BlTCONS00086231-exon-Sc0000105-1564993656:379615..379886Branchiostoma lanceolatumexon
BlTCONS00086231-exon-Sc0000105-1564993656:380563..380824BlTCONS00086231-exon-Sc0000105-1564993656:380563..380824Branchiostoma lanceolatumexon
BlTCONS00086231-exon-Sc0000105-1564993656:381163..381302BlTCONS00086231-exon-Sc0000105-1564993656:381163..381302Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000105genomeSc0000105:379615..381302 +
Properties
Property NameValue
GeneIDBlCUFF042031