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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:1319070..1324428+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062845 ID=BlTCONS00062845|Name=BlTCONS00062845|organism=Branchiostoma lanceolatum|type=mRNA|length=5359bp|location=Sequence derived from alignment at Sc0000050:1319070..1324428+ (Branchiostoma lanceolatum)
CCGGCCCGAACACCGTAAACCCGGGCGTCGACGCGCGAGACTTCCTCGAT
ACGGTCAATCGGATTTTCCCAGAATGCACTCTTTCTCTTGGATGGACAAC
AGGTGGTTCTTAGAACTTGTGAGAATTGCGAAAGTTGCTCTACTTTTTGT
TGTATCAATAAAGGTTCTTGGTGTTAAGCATGATTGTTTTCAGAATAGGG
AAGACACGTGTAAACTTAGGTTTATTTCGGTTGCCGATCCAAGAGAATTT
CGTACACGTATTTGGTACCCCCCTCGACTTCTTCGATAGGGTCAACCGAA
TTTTCGCAGAATGCACTCTGTCCCTTAGATGGACAACAGGAGACTTTTTA
GCCAAGTTTATACCAATCTTGATCGAAACATGTGAAGGATGGGTGGGAAA
GTTTTCTTATGATAAGGATGATCTCAGAAGACTATGACACGTATTTGCTC
CCCCCTTCCACCTCTTCGATACGGTCAACCGGATTTGCATGAATGCACTC
TGTCCCTTGAATGGACAACAGGTGACTTTTAGAACTTGGGAGGCTGGTAG
CAGCCTCACAGTTGGGCTCTTGGTTCCAGTTTGGTAGCTAGGAACCTCCG
GTTCAAATCTTGGGAAGGGTATCTCGGTTGGAGCTGTACCCGTTTGTTCG
AAAGGACGTAAAATGGGGGTCCTGAGTTCCAGGAGGAACCTCGAGCACAT
TAAAGGGGAAATCAAGCTATGATCTCCAAAAATCTCTTGGCGTCGGACGG
GGTCATTGTTACTTTCATTTCACCCCTCCCCCCTTCCAATCTTTAAAATG
ACCCTGCAGTCTTCGATACCCATGATGCACACGAAATTACCTACAATGCA
TCTGTAAGCTGACCCCATGACTCAACCGTGTTTTACCCGTGACGTTTCAG
GCTTCTACTACGACCGAGAAAACGAGGGCTACACGCGGGGTATGGTGGAA
GAGATGCATTCCTACTGCAAGGACCTGTCACAACCCGTGACGTTTCCCAT
CAGAAACTCTCTACTCGGTCTGCCTGGGACTATGGAGAACCTGAAGTGGT
TGTTGAGTCAGTCTGAAAGGTCAGAGTTCACAGATATATATATATTTATT
CCATCGCCGTTGTTGTTGTTATTAGTCTCTACCAGGCTCCAGACTTGACT
AGAACGACTAGAAATTGGCCGAATAGATGACATGCCAGACAGACAGACAT
ACATACACAAATGCACACAGACACACATACATATATCCACACACACACAA
TGTACGCACACACACACACACACACATGCACACACACACACATACACACA
CGTGATGAACGGATACAATAATATTCCGTGTTGGCAACCTTTCTGCTTGG
GTAACGCTTGATTTCTTCTCCTGATTTGCAGATATACCATCACCGTGTGG
ACGTCAGTATTTGACGTACACAGAATATACGACCTTGTGAGATGTCGCAA
TGCATTCTCGCACAAGCGAGTTTACTACGATCTTCCAAAACAGGTATGTT
AACACAACGTTTCAGTCATAAAAGACAGACCGGCAGGGAGTAGGAAAGTA
GGAAGGAAAGAGGGCGATAAAGAAATGAAATATGAGAGAAGCCAATTTTA
TAACCGTTGCCTTATAGATATACATATATGGCCTCACAGTACTCTGTGTC
AACCGAAACCTTACATTATTTGCATTACTTGCTTTCTTCAAGAACGTACT
CGAGAAAAATACGATTAGACAAAAATACGACACGCACGTTTTCTTGTTCT
CATTACAGCTAGAAGATGATTTCCTTCAGGCTATGCAACGTCACGAGTCA
AAGGTCAACCCTCTGTCCTTCTTCCCGCTGGAACGACGAGATGCTCTACT
TCTCACGTGGTCTCACGAGACCAACTCCCGAGAAAAACTGACTGAAGCCT
TGCAAGGTAAGTGTCGATTGAATCTAACCGCTCACACAAACACACAAACA
CAAACACACACACACACATAACATATACATACAAATGTTCCAACTTCAAT
GCATATATCTCAATGATAGAAGAAACTGCTAAAGTGGAATCTCGCATGAT
TTACAGGGAAGTCAAACATCATCGAGGCAGACGTCGTGCTAGGAGACCAG
AACCAACCAATCATGGCGAAGCCCACCGATACTGATTATGACGTCACGTT
CGAAGAGTGGCTGTCCGCCATCATGGCGGCTGACCATGACGTGGGGATAA
AGCTGACCTTTCACACTACAGAGGCTGTCATACCGGTACTAACTTTTTTA
TGATGAGATTCAACAAGACTCATCAAGAGAGTGGTGTTGCCATCGTTTGA
AAGAGAAAAGTGATTATGCAGCATAGTTCTGTGTGAGAGATAAGATCATA
GCGGTGTTAATTCCTTCCAAGATAAACCAAAATAAGTGCTCTGATAAACC
CTGGTTCAATGAAGATTGTAAATCAGCAGTCCAAAGTATATCATATAGAG
AAATGGCGCATTTAGACGGAGATCTAACTTACAGTTTTGATTAATGGAAA
CTGTCTTCCAGATGTCCTAAGTTCCCGTTTCACACATTTCTGTATGACCG
TCGGTTCGTCTAATGACGTAAACTAGAAATTATTTTTCTCGGGAACAGCT
GGCAACTGGTCAGTTCCTGAAACGTGGATCATCTAAAGGACCCCAATAGA
TGTACCAGACATACTTTGTCCTTTTGCAAAATAAACAATGACATATTGAA
GTCATCCATGACTATATTAACATGAAAGTTCATCAGTGTTGGTCAATGAC
ATCACGAATAAAAACTCAGTTCAGTACTAGCACTTGTAATAAGTCCCACG
TCTTCCAAGTATTGGTCTTGTAAAGTTGATGATCAGTCTTTGGTCATAAT
GCATCCAATATCATGTCTTTATTGTACTTCCACAGACAATGACAATATTG
CGTCAAAACATGTCCAAGATTGACTTTCCTGTGATCATCAATGCGGATGT
CTTGGCTCCAAGCTACGAGTCCGGACAACCACTTGATCCCGACTTAGTCT
TCAAGCCTACTTATGAGCTGTACCCCAATGGCGTCACCACTTCCATTCAG
TTCAAAGGAATAACACTTGAGGGTGGAATCACGCGAGAGATGGCGAGAAA
TGCACACGCGCTTGCGCAGAGGCTAAGTAGCCCCGTGACCTTCACGATCC
CCGCCGTCGTCGCCATGACGTCATGGCCGAACGTAAAATGGCTGCTCGAA
CAGTCTGACACCTACACGTTGACACTTACGGGAGGACAAATAAGTATCGA
TCCTATTGATCTCTTCACGATTCGGAACGATTTCGATTGGGGTAGGATTT
TGTACGACATTACAACCGAGAAGGCAACACAGTTGGCGCGGATGACTGAA
ACTGGAGGCAGTTTGGTTAATTTCTTCCAAGCTAGCTACAAAATCTATGG
GCGGGATGCCCTATCCGTCACATGGGCGCATGGCGTAAACTCTAGAGAGA
CCGTTGAAGATGCCATGGGAGGTTGGTTGCGTTTAGAAAAAAAATCAAAA
TGTAATACAAAACACCAAGTATGACACCATCAAAATAGTTTACAAGTTAT
AAGCTCAACATTAGAATAGATCTTACATTTTGTCATTTCATAGAATTCAA
ATAAGTAACATACTTTTAGCTCTATCTATCGGTGTAAAACTTGCACTTCT
TGCACTTATATGAATAGCGAGCAGTTCAGGGATCTTCATCTTTTGACGTG
TACGACTAACAGGTGTTTCCCCCTGCACGTAGCCTATCGTGAGATCACCA
TGCTCGAGGCTGACGTTGACATCCGGTCTGACAACGTTCCCGTCATGTCT
GACGATGCGTCAGTCGCCGGAAGTGACGTCATGACTTTGGAAGAGTGGCT
GGACATTGCAAAACTGAGGAAACAGGGTATCATGCTGGAGTTCCACAGTG
TCAACTCGGTAGTTCCTGCTCTGGAGGTAGGTAAATGTTCATCTACCACT
TAAGATACATGAAATTAACTACTCTTATTGTACAGTGATAACGTAAAATG
TCCCTACATACTTTTTTACAAACTGGATGGCAGAAAAATTCTTGCTCAGA
CAATAATGTTATGTACTATGTTGATGAAGGTTAGACATCCACAAGATACA
CAAGATAACAGCTAGTTTGACTACAGATCTTGCTTTTCACTGACGAAAAG
TAATGGATACTGCCTGGAATGTCTGACCGTTTATAAATCTATCCAGTTTC
TTGAGTAATTGTTATCTTGTGCATGTTCAATCCAAGTCAAATTTCAGCCC
TACTCCACAACTTCTTATCATCTTTGTGTCATAAATAGATTTTCCAAAGA
CGACACGGAGACCTAAGAAGCCCTGTCATGTTGAAGGCAAAGATTCCTGG
CCTTTTCAGCAAGGAGACATTTATCGATCCTATTGTTGATATGTTTCCTC
ACGTTTCGATAGGTAAGAACTTTGAAGTCACTTTCAGTTCGCGTTGAATT
TGTAGCCTAGGATTTAACACATTGGCAATGATCCATAAGAAATAGATGTA
TTAATCCATTAATAACAGTTGACTTTGAATAAGATTAGTTTTTATTTTAT
TTTGCAAACATTGTATTCTAAAATTACTAGTAGTAAAAGCTTCCAAATTA
ACTAATTTGTACGTTGCTTTTTTTTTCTTCAGTTTTTGCGATGAGACCAT
CGAGCCCGTCAGAGGGTTACTCTCGTGCCCAGGTTGAGGAAATATCCCGG
ATGTGCGCTAACCTGACACAGGTCGTGACGTTCAGCGTAGACGCCAGACA
TGTAAGTCGTGAATTGTCTCTTTGACGCACATTGGTTTTGTAAGGATGAG
GCAGGCACCGTCGTCTCGGTTGATTGGTGGTTGGTGACAGGAATTCTAAG
GACAGTTGAACATTCGATGCGCTAATTTCTTTTGCTGGAAAAATACTTAA
CTTTGATCGAAACTATGTTGTATTGAATTGAATTGAAACAGGTCAATTTT
TGTGTCATTGTAGGTGCGTAGATCGTGGGACAACCTGAGCTGGCTACTCG
GCCAGTCTCCGCTCTACCACCTGTACATCTGGGCGGGCTGGCCGGAACCG
GAAACGTACAGCGTTGACGTCACCGACCTCGTGTTCGTCAGAAACAACTT
CGATCACAGCCGGGTGTTCTATGACCTCATCCCACGGGTCATGGAAGAGT
TTAACATGGCTCTGGAAGAAACTAATTTACGACGGGCAATGATGCACTAT
AAAAACTGTTAATAAAACTAATAATGTTTTTTGTAGTTTTGAATGTTAGC
CATTTTATTTTTATGGAGGCTAGTCATTTTGTTTGCCATTTGCTGAGGAA
TTACACTTTGTAAGATTTGAAATTTAGAAATAAAACGTTTCAATTATCTT
TTATATCAA Coding sequence (CDS) from alignment at Sc0000050:1319070..1324428+ >BlTCONS00062845 ID=BlTCONS00062845|Name=BlTCONS00062845|organism=Branchiostoma lanceolatum|type=CDS|length=810bp|location=Sequence derived from alignment at Sc0000050:1319070..1324428+ (Branchiostoma lanceolatum)
GGCCCGAACACCGTAAACCCGGGCGTCGACGCGCGAGACTTCCTCGATAC
GGTCAATCGGATTTTCCCAGAATGCACTCTTTCTCTTGGATGGACAACAG
GCTTCTACTACGACCGAGAAAACGAGGGCTACACGCGGGGTATGGTGGAA
GAGATGCATTCCTACTGCAAGGACCTGTCACAACCCGTGACGTTTCCCAT
CAGAAACTCTCTACTCGGTCTGCCTGGGACTATGGAGAACCTGAAGTGGT
TGTTGAGTCAGTCTGAAAGATATACCATCACCGTGTGGACGTCAGTATTT
GACGTACACAGAATATACGACCTTGTGAGATGTCGCAATGCATTCTCGCA
CAAGCGAGTTTACTACGATCTTCCAAAACAGCTAGAAGATGATTTCCTTC
AGGCTATGCAACGTCACGAGTCAAAGGTCAACCCTCTGTCCTTCTTCCCG
CTGGAACGACGAGATGCTCTACTTCTCACGTGGTCTCACGAGACCAACTC
CCGAGAAAAACTGACTGAAGCCTTGCAAGGGAAGTCAAACATCATCGAGG
CAGACGTCGTGCTAGGAGACCAGAACCAACCAATCATGGCGAAGCCCACC
GATACTGATTATGACGTCACGTTCGAAGAGTGGCTGTCCGCCATCATGGC
GGCTGACCATGACGTGGGGATAAAGCTGACCTTTCACACTACAGAGGCTG
TCATACCGCCTATCGTGAGATCACCATGCTCGAGGCTGACGTTGACATCC
GGTCTGACAACGTTCCCGTCATGTCTGACGATGCGTCAGTCGCCGGAAGT
GACGTCATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062845-exon-Sc0000050-1564993656:1319070..1319171 | BlTCONS00062845-exon-Sc0000050-1564993656:1319070..1319171 | Branchiostoma lanceolatum | exon |
| BlTCONS00062845-exon-Sc0000050-1564993656:1319970..1320138 | BlTCONS00062845-exon-Sc0000050-1564993656:1319970..1320138 | Branchiostoma lanceolatum | exon |
| BlTCONS00062845-exon-Sc0000050-1564993656:1320451..1320562 | BlTCONS00062845-exon-Sc0000050-1564993656:1320451..1320562 | Branchiostoma lanceolatum | exon |
| BlTCONS00062845-exon-Sc0000050-1564993656:1320828..1320975 | BlTCONS00062845-exon-Sc0000050-1564993656:1320828..1320975 | Branchiostoma lanceolatum | exon |
| BlTCONS00062845-exon-Sc0000050-1564993656:1321126..1321304 | BlTCONS00062845-exon-Sc0000050-1564993656:1321126..1321304 | Branchiostoma lanceolatum | exon |
| BlTCONS00062845-exon-Sc0000050-1564993656:1322802..1322995 | BlTCONS00062845-exon-Sc0000050-1564993656:1322802..1322995 | Branchiostoma lanceolatum | exon |
| BlTCONS00062845-exon-Sc0000050-1564993656:1323358..1323481 | BlTCONS00062845-exon-Sc0000050-1564993656:1323358..1323481 | Branchiostoma lanceolatum | exon |
| BlTCONS00062845-exon-Sc0000050-1564993656:1323702..1323820 | BlTCONS00062845-exon-Sc0000050-1564993656:1323702..1323820 | Branchiostoma lanceolatum | exon |
| BlTCONS00062845-exon-Sc0000050-1564993656:1324033..1324428 | BlTCONS00062845-exon-Sc0000050-1564993656:1324033..1324428 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:1319070..1324428 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030841 |
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