BlTCONS00036049 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00036049
Unique NameBlTCONS00036049
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000017:3175495..3176542+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00036049 ID=BlTCONS00036049|Name=BlTCONS00036049|organism=Branchiostoma lanceolatum|type=mRNA|length=1048bp|location=Sequence derived from alignment at Sc0000017:3175495..3176542+ (Branchiostoma lanceolatum)
GCAAAGTTTACAGTATTCCCTCCAAAAAGGTCTTGCTTACAATAAATACA CAGTCCGACAAGGCACAATGGCGGGCATGCCCTATCAATTACCAATCGCT TTTGTAAGATATTGGTCGTATGCAACACTGGAGTTGACTCGAACTAAAGA GGGTAGAAATATAAGGAGACAGATGTCATTGTTTAGAGTTGAGGATCTAG GACGGAGCGGGGTAGAAAAAACAGTAGCAGTTGGGTTCGTGTACTGTGAG CGGTGGAAGAGAATTTACAGTCCCAAACAGAAGAGTTTTGCTGAAAACAC AGATCAAGCGTTATCTGTCAGCGACGTCGAAGATCGAGAGTGAGGGATTA GAAGATAAAGACCCCACCGGCTGGTTTTCATTGTTCTCCGAGATCGTACG GATAAGTCACACGCTTCCCGACAATGTCTGTTGCTAAGGGAGGCAAGAAG CGGGTAACCCGGATCGCAGTGCCGTCCGGTGCCGACTCCGACGGGTACTC CAGCGGAGGCGAGGGGACCCCGAAGCCAGGACGCCGCAAGAAGTTCCTCC AAGTCCCCGACGGCGCGACTCCCTCCCTCCGGGGCGGCTACGACCCCACG GGAATGGACGAAGTCATGTCAACAGTTGGAGGAAGCGAGCACTCCTTCGC ACACGGCTCAAGTCGGAAGGTACAGTACGAAAACACTTACAAGATGGAGC CTGACTTTAAGTTTCAGTCCCACCTTATCGAAGGCCCGGCTAGAGATATC CTTGAGACTCATCTTAAGGATCAGCCCTACGACGCTGCGACGTGCCGAAC GCAGGCGCAAGACCTCGCGGGAAAAATCATGGACGCCACGAAAAATCTGA ACATCAAACGGTACAAACTGGTAACCATTGTCAGCATAGGGAGCCTAAAG GAACGCCCCGGTATGCACTTTGGGAGCAGGTGCTTGTGGAATGACAAGAC AGACTCCTTCACGACGGTCAAGTACACTAACGGATCCCTCTTCGCAGTCG CTATGATATACGGACTGTACTTCGAGTAGACCAAAGAACAAAACGCAT

Coding sequence (CDS) from alignment at Sc0000017:3175495..3176542+

>BlTCONS00036049 ID=BlTCONS00036049|Name=BlTCONS00036049|organism=Branchiostoma lanceolatum|type=CDS|length=606bp|location=Sequence derived from alignment at Sc0000017:3175495..3176542+ (Branchiostoma lanceolatum)
ATGTCTGTTGCTAAGGGAGGCAAGAAGCGGGTAACCCGGATCGCAGTGCC
GTCCGGTGCCGACTCCGACGGGTACTCCAGCGGAGGCGAGGGGACCCCGA
AGCCAGGACGCCGCAAGAAGTTCCTCCAAGTCCCCGACGGCGCGACTCCC
TCCCTCCGGGGCGGCTACGACCCCACGGGAATGGACGAAGTCATGTCAAC
AGTTGGAGGAAGCGAGCACTCCTTCGCACACGGCTCAAGTCGGAAGGTAC
AGTACGAAAACACTTACAAGATGGAGCCTGACTTTAAGTTTCAGTCCCAC
CTTATCGAAGGCCCGGCTAGAGATATCCTTGAGACTCATCTTAAGGATCA
GCCCTACGACGCTGCGACGTGCCGAACGCAGGCGCAAGACCTCGCGGGAA
AAATCATGGACGCCACGAAAAATCTGAACATCAAACGGTACAAACTGGTA
ACCATTGTCAGCATAGGGAGCCTAAAGGAACGCCCCGGTATGCACTTTGG
GAGCAGGTGCTTGTGGAATGACAAGACAGACTCCTTCACGACGGTCAAGT
ACACTAACGGATCCCTCTTCGCAGTCGCTATGATATACGGACTGTACTTC
GAGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00036049-exon-Sc0000017-1564993656:3175495..3176542BlTCONS00036049-exon-Sc0000017-1564993656:3175495..3176542Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00036049BlTCONS00036049-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000017genomeSc0000017:3175495..3176542 +
Properties
Property NameValue
GeneIDBlCUFF017650