BlTCONS00036047 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00036047
Unique NameBlTCONS00036047
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000017:3171126..3172394+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00036047 ID=BlTCONS00036047|Name=BlTCONS00036047|organism=Branchiostoma lanceolatum|type=mRNA|length=1269bp|location=Sequence derived from alignment at Sc0000017:3171126..3172394+ (Branchiostoma lanceolatum)
CCATTATTTAGTAATTGTAACCCCCCCTTCATGAAAGTGTAATAGTCCAA GGCTGCCTCGTTCTGAGAAAGACCCAGGCTGTCATTCTATGTGTTGGAAT CCTGGGGGTCAGGAATAAACCATGTAGCTCCACAATCTCTGTCTTGGCTC CCTGTATCTGTGTCCAATGACCTCAACATCGGTCCATAACATATGGCGTC ACGGACAGGATTCACAGTATACTATGGGTTGCCAACATGTCGTACAACGT GGAGGAGGGTATGAATTGTATCCAGTCTCCAAACTCCACTGACAGCACGG ATGGTCAAGTTGGCTTGTCGATCTCGTCGGGTGGAACCAGGCTAGCGAAT GCGGCACTGTATCCAGTCTCCAACGTCCACTGTCAGCAACGGGCGGTCAC GCAAGCTTCTAGTCGTCGGGTGGATCAGAGAGGTGAATTTTTTGCTTTCC ATCTCCAGAGTCTGCTGACAGAACGGTTAGTCAAGTACGCTGCCGAACTC GTCGGGTGGAATCGGGAGCGAGAGAATGCAGGGACGTGTCCAGTCTTCAG GGTCCACTGCCAGCAACGGGCGGCCGAGCAAGCTTCCAGTCGTCGGGTGG GATTGAGAGGCCAAGGAACATTCTGGAATCTTCCATCGTTAGTATCAGGG ATCGTGTGCAAGCTGAAGACTCCCAGAACAATATACTCCTCACCAGACTC TACTGTTGTATGCACCATCTACAGACTGTTCCCTTTATAATCATATGCTG GCGCAGGGACATTTGACTCTTTACAGTGAGATTTACCCCTGAGTTTAATC TGTGTTTAACTTTTACTCGTCTGATGTAACATTGCTTTGTAAAGTTCAGT TTTGCCATGCCACGTGGCCAGAAATCATGCCCAGACTTGCTCCTTTGTCT GGTTGTTGTTGTAATGTGAGTCTCAGTGACCCACATCTGGTATTCATTTC CTGTTTCACTCACCATGGGCTGCTTATCACAAATAACAGAGTACCAAAGA AAACACTTCTAAGTTTAGATACTACATCAATATTGTCCTCATAACATGCA AGATGTTGCTCGATACATTCCTTTGTTTGATTGTAAGACTCTTCAAGTTC ATACTATGGTAGCCGATTGTGTTTCAGAGTGCCCAACATTCAATCTGGAT CTCTTTGTTAGCCAGGGTTTGTTGTCTGAAGTATTGATCGCTACACAATA GTTTTTGCCATGTCTCTTACATCAAACTCCGTCCTAATATTTTACATGTT GCTCGATACAAATCCTTTN

Coding sequence (CDS) from alignment at Sc0000017:3171126..3172394+

>BlTCONS00036047 ID=BlTCONS00036047|Name=BlTCONS00036047|organism=Branchiostoma lanceolatum|type=CDS|length=504bp|location=Sequence derived from alignment at Sc0000017:3171126..3172394+ (Branchiostoma lanceolatum)
ATGTCGTACAACGTGGAGGAGGGTATGAATTGTATCCAGTCTCCAAACTC
CACTGACAGCACGGATGGTCAAGTTGGCTTGTCGATCTCGTCGGGTGGAA
CCAGGCTAGCGAATGCGGCACTGTATCCAGTCTCCAACGTCCACTGTCAG
CAACGGGCGGTCACGCAAGCTTCTAGTCGTCGGGTGGATCAGAGAGGTGA
ATTTTTTGCTTTCCATCTCCAGAGTCTGCTGACAGAACGGTTAGTCAAGT
ACGCTGCCGAACTCGTCGGGTGGAATCGGGAGCGAGAGAATGCAGGGACG
TGTCCAGTCTTCAGGGTCCACTGCCAGCAACGGGCGGCCGAGCAAGCTTC
CAGTCGTCGGGTGGGATTGAGAGGCCAAGGAACATTCTGGAATCTTCCAT
CGTTAGTATCAGGGATCGTGTGCAAGCTGAAGACTCCCAGAACAATATAC
TCCTCACCAGACTCTACTGTTGTATGCACCATCTACAGACTGTTCCCTTT
ATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00036047-exon-Sc0000017-1564993656:3171126..3172394BlTCONS00036047-exon-Sc0000017-1564993656:3171126..3172394Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00036047BlTCONS00036047-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000017genomeSc0000017:3171126..3172394 +
Properties
Property NameValue
GeneIDBlCUFF017649