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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000017:3057462..3063678+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00036037 ID=BlTCONS00036037|Name=BlTCONS00036037|organism=Branchiostoma lanceolatum|type=mRNA|length=6217bp|location=Sequence derived from alignment at Sc0000017:3057462..3063678+ (Branchiostoma lanceolatum)
GCTGTTGGTGTTGGCACGGTAGTGACGTCTTTAGATTTAGTGTTTACACA
TCACTGATAAGATCTCGCCTTTACAACATCATTCAGTCACTGGTTTGTTA
ACAAGCCAAGAAGTGATACCTCAAGAAAACATGGAGAATTCTCAAGACAA
GACGACTTCAAGACGGGCCAAGAAGAGTAAGCGTCTCCTGATACTTTTGG
TAGCAGTTTTACTCTTCGTGCTGGTGGCGGTAGCTGTGACGGTAGCCTTG
TTGGTGTACCGGGCGGACCAGGAAGTTCCTTCGGTTGACCCGTGGCTAGG
AAGCCGCCTACCGTCCTCACTGGTCCCGGTACATTACCAGATCGAGCTCC
AGCCTGATCTGAACACGTTCACTTTCGTCGGAAGCGAGCAGATCACGATC
CAGTGCCTAGAATCTACCAACTATATCTTGCTGAACTCAAGACTTCTAAA
TATCACTGACGGGTCTGTATCACTACAAACAGCCACAGGAGAGGCTGTTA
ACGTTGAACGCTGGTTTCTGTACCCAGAAAATGAGTTCTTCGTGGTACAG
TCTGCACAGAGATTGCGAAAGGGGGAAAACTACATTCTGAGTGTGTCGTT
TTCGGGCATGTTGATGGACGACTTACGTGGGTTCTATCGGAGTTCGTATT
TGGACAGCCTTACCGGCGAAAGAAGGTACGTACTTTAAGGTCCACTTATA
ACCATAAAACCTTCGTCACTGTTGTTGTCGTAGAGGATATGGCCTTTGTA
TAAGCTTGAATACATTTACCGTTCTTCCTTCGTTCCGACCCTTATGGTGC
CTATAGCTAGTGGCACATAGGGCAGCAAGTTTCCTTGCTGTTTCAGTAGC
AGGATATATTTTTACAGGGAGGGGTTGCTAGCCCTTTCCCTTGCTCAATG
CACATCCTCGAACACCTGGCCCACATTTACATCCCTTCCGAAAGACGGTG
TAGCACCAACCAAATGACCTGACCCCGGGACTTAAACCTGGGTCTCCAAG
TCATCATGATCAGTACACAAACAATGAGACTGCTACCAGTCGAGCCACAG
GGACATCCCACTGTATGAAATTCATGCATGAATGCATAGATTGTAAAACG
TATAGAATATTATAAGGGCTGTATTGGACACAAAAATATGCTCCACGTGT
TAGGTAGCTGTCTGCGTCTTAATTGGTTGAGTGGACACACCTCCAAGTGA
AGTGACGTCAGAGTTTGGACCTATCGGATTATCTATATCCTTAACAACAA
GAAACTTGAATGTGATACAAGCACAGCTCTACTCCAAAACTCGACGATAA
GACTGGTGTCAAAAAGGGGGCGTACATATCGTGGTAAGCGCGCGCTTGTA
CTTAGTTCAAACACTTCACTGACATGGAACACACAGGGCATGAAAAACAC
GTAAAACAATAAGTCATCCTTTGAAGGAGCTGTCTAAATATTTGCCCTAC
CTCGCTGAAATGACGTCAGCTATAGATAGCGTGCGGTAAATCAAGTTTTA
GAGCCAGACCGTATTTGTTAAACACTGATTGTCTGAGCAGGTGTCACAGT
TAAATCGTGCCCCCCTGGACAGGTCACCCGGGGCGAAATCTCAAGGGTGA
TGAATTCGCTGTGACACCGGCAAGGTCTTCGCGATTCCTGCGAAGGTACA
TGTTTAAGAAAACTTAATGTATGCATATCTAACCGTTCAACAATTCATTA
ATTCTTTGACACATGCTATTGAAACCATGTACATGTACTCCTGAAATGTG
TTGACATACATATGAAATTGACCTTTCGTCCAATATTTAGATACACTATA
CCGGTAAATGCGTCTGTGTTTGACGTGTGAATATAAGACCAAATCCTGGT
TGACGTGGCCAGCGGCGATTGGCGAGTTGCGTACAAAAGTTCGGCAACTG
CCTGCTCTCTTTGTTTTGATGAAGATTATTTTGGAAGTTGAGTTATGACA
GTCTCTTAGACCTTTGAAATAGCATGGTTTCAATGTCCTTGATATTAAAA
AGCTGTTGTCATCTTAACGTTTAAAGTTGATCAATTACTGTATGGTACGA
TGGAAACTTGGCAGAGGAGAAATCTGCTCATAATTTGGCCATGTTGATTT
GATCATATGGATGACATCCCCTGGGAACCCCAATACTGATGCGAGCGTGC
GAATAAAAAAAGGTTGCCTTCATTATGAATTCTACGTGGTTAGGAAGTTT
GAGCAAATGACTTAACACACAATGTATGGTATACCCAATTATAGATTCTT
CATTTTTGTTCTTTCACATCTTTTTCTTCGTCTTTGGAATTGACATTGCT
ATTCAACGATATTTGTATCCATTCTTCGAAATATTTTTTGTGTGCAATTT
ACGGCATGTATTTGTTCATTTTGCAGCTGATTTGTACGATTTACAGTATA
GATGAAAACTTTTTTTGGAAACGGACGAAAAATGATGCGCACGCGGATGT
CATCCATACAATAATAATCGAATCAACATGGCCTACTTACTTACCATGCT
ATTGCGACGTATTTTGCAGGTACCTGGCTACAACGCAGTTTTCTGCTATA
GACGCCCGGAAGGCCTTCCCGTGTTTCGACGAACCCGCTATGAAAGCAAC
GTTTGACGTCACTCTCGTCCACCAATCAGAGTACACGGCTCTCTCCAACA
TGCCGATACGGGAGGGGTACTGTTATTTTTGTTTTGATTGGCCTTCGTGC
GTGGTAATGTTACTCATCATACGAAAGTCCCTGCACTACTGTCGTTTCAA
TATATTCATTATTACCTCCATTAAAACGGAGGTATTGTTTTCGGATTGTT
TGTTTGTTTTGGTGTGTGTGCAAGTTTGTTCCCGTTAGCCCGGCTGGCGG
AAATGGTGTAACTGGAAACTTGCAGGATGGAAAGACTGCTTTGGTCCGGG
CTCAAAGTTGGCTTGGTCTGAGTCCAAGTCCAAGTTCGAGTCAGAAAGGC
AGAAAAATACCTAGTCATGAATAATAATGAATAAAACAGTAAATTCACAA
AACCCTTTAAAATTTTGAATTTGTTTTGTAATTATGTTGCAGCCAGTCTG
AGGCAAGAGAAGAAGGGTGGACAGCCGATCACTTCGATACCACTGTGCGC
ATGTCCAGTTACTTAGTCGCCTTCGTCATTTCAAACTTCACATACAGGGA
AAACGTCACAGGTCTCCATGGCAACATAACGGTAACTTTTAATTCAAATT
CTCTGTTAACGGATGCTTTTCTTGCTGATATATTCGTTTTGCACGAGCTT
TCTTTTTGTTATTTCTTTTTTCCTTCCTTCCTAGCACCTTCTGCTTTCGT
CTCTTCCTCCAATGGTTTTACCCGTGCTTGAACGTAAAATCTTACAGTAT
GACATAAGAAATAGTATACATGTACTTTCTGGGTCAAAGGTGAACAGCCA
TTGCCAACACTAAAAATGGACTACTAGTAACCCAAATTTACTGATCAACT
CCAGTCTTTCGCTATGGCAGTTTAACTTTGAATCATAATAACTTCTACCA
ACACAGATGAACTTTCAAATGAAAAGTATGATACACAAATACAGACACCC
TTCATGTCACGATATCGATGTTTCTTGCAGCTGAAGGTGTGGGCCCGACC
AGACGCCGTTGAAAACGGTGAGGTCGACTACGCAATCGCCGTGGCCTCAC
AAGTGTTGACGTATTACGAGGAATACTTCGGTATCCCCTTTCCTCTCCCC
AAACTTGGTAAGTAATTTTCCTTTTTTTTCCAACGTAAGAGAGGTCACTG
TGGCTCACAGAATTGTCGGTCGTATCTATGGGTCTTTATCAGGAATATGA
CCTACTTCCCTGACGCGAGGTCAAAGGTGTCTGGAAGTCGATACCGACCG
CCGTCATGGTTAAACGTCATTTAAAAAAAAACTAGCCATTGGTCATCGTT
GCAAAATACAATTACCATTGGGTAACCCGGTTGATGATTTGCTTCAACGG
ACTAGAACATAATCTAGTTTAAGTCCTTTCTATATGCTTAAAGAAATGCT
TTAGAATCTGGATCACTGAGCGCCGTATCATTGCTACTACCGGCTTATAT
TTTTGATGACCAACCTATCGATTTTATCTATTGTAGTGTAAGTTTCTTGT
GATATTTTGTCTCCTCCAGACATGGCGGCGATTCCTGACTTCCCTTTCGG
CGCCATGGAAAACTGGGGTCTCATCACTTATCGCGAGACTTCGCTATTGT
ACGACCCTTCCGTCTCAACAGAGGCAAACAAACAGAGAGTAGCTGTTGTT
GTCGCCCACGAGCTCGGACATCAGGTAAATACCCCCTTCAACCACAGTCG
TACAACAAATTACATGATCTGAGTTGAAACTTTCGATCCAGTGAAAAAAT
AATGTGTGGCCTTCCTCAGGATGTATAACCCATCTTGTACACGTGACTCC
AGTCAACCAATAATCAACCTTCACTCTGACATGACAGATTGGGGTGGGGG
GTGCTGCTGCTAACTAGCCACCCACCTGTTATATTTATATTCTTCATTCA
TTTTGGTATTGCTACAATTATGCAGTAACGCTTCTATCCATCGCTTAGGC
CAACGCAGATTCTGCCTTCTTCCAAAGTGTCCTTTGCTTTCTATCATCAC
CAAATCTCCACAGGTGAAAGCAAGATCCATTCCGACGCTGCTGTTGTTCC
CTTCTCTGTCCCCGCTGTCACGCAGTGCACGCAACCCCTCACTAACCCCT
CACCCCTTCCATGTCCCCAACAACAGTGGTTCGGAAACCTAGTCACTGCG
GAATGGTGGGACGACATTTGGCTCAACGAAGGCTTCGCCAGTCACGTTGA
ATACCTTGGGGCGGCACATGCGGAGCCTGATCGGATGCTGGTATGTGACG
TGTCCGACTCCTATTGGATGGCAGTATGTCACGTGGTCTTTCTCGTTTTT
GTTGTCATGCGCAGTGGTTTGGGAATCTAGTCACCCCCGCGTGGTGGGCG
GACCTATGGTTGAAGGAGGGTTTTGCCAGTACAGCCGAATATGAAGGGGT
AGACTTCGTGGAACCCACGTGGGGCATGGTAGGTTGTTCATAAGCTTCTT
TGTAGAGAACTTTGACCAAAACAACACTAAAACCGAAGAAATTGATAATC
GTTGGTAACGTCAGTTCCAAAACTCAATTGTCAAAGATGATTTCATTGAT
CGCTTTTAAAATCTCGGCCCCAATAAACCTAAAGGAATGACATCACATAT
TTGTGCGTCTTTTGTTGTACTTTCAAAAGTATGACACAGGAACGATTTCT
TTGGATGAAGATTATAAAACCCATGAAAATCTTTTAGATGCACAAACTAA
AAATTTAAGCATATTCCAAAAAAATACAATCTCATCAAGTTTTGCATTGA
TGGGATGAAAGCAGAATCAACTAATTTGAAAACCATTTCAAAGAATACAG
AACGAAAGAAAATCTATAGTTTAAAGACCATAAATGATTTGTGAATATGA
TTTTTCCTCTAGGAGGACCAGTTTCTGGAGGCAGACCTGCATCCCGTGTT
CGCCCTGGACTCCCTCAGTTCGTCCCACCCTATCTCACTTCCGGTCAACC
ATCCCGACGAGATCTCACAAATATTCGACACCATCTCCTACAGTAAGGTA
TGGGCATATCTATCATGACTACATCCCTAGGCAGCGCAAAGAATGCTGGG
ATTGTTGCAATTCCTCCTCTGTAGACAGCGAGTTTAGCTTGGCCGTTCAT
TTGTACTTATAGAATTCATTATGAATCGGATCTTTAAACTGCAATTTCCA
GCACAAAGTTAAATAACTGGACTTGCTCATATTCATTTTATAACACCAGA
CTTTGAAACCACCAATGAATGAATACAACATTTCTATGACGTCACTTGAC
GCAACTTAAAACACGTGATTCGGTTAGTAGTGGATCAAAAGTAGCAGATA
ATCTGTAGCGTCCTCCGTCTCTATCAATAAACAGTGTGTTTTCCCATATT
TTCCAGGGAGCGTCGATAATCCGGATGATGAGTTCTTTCCTGGGCAGCAG
TTACACCAAAGGGATCAAGGTAAATCTTGAAACTATGTTGTTTATGTATA
TGACAATTGGCATTAGTGACTTTGTGTCAACTTTTTACACTTGATTGACA
GCCGTGTGGTTGTGTAGTATGATCGAGATTCTGCCTTTCTTCCTACTCAG
AGCTACCTGGAGCGGTACCAGTTTGCGAACGCCGTACAAGACGATTTGTG
GAACTCTCTAACAGAGG Coding sequence (CDS) from alignment at Sc0000017:3057462..3063678+ >BlTCONS00036037 ID=BlTCONS00036037|Name=BlTCONS00036037|organism=Branchiostoma lanceolatum|type=CDS|length=1317bp|location=Sequence derived from alignment at Sc0000017:3057462..3063678+ (Branchiostoma lanceolatum)
ATGGAGAATTCTCAAGACAAGACGACTTCAAGACGGGCCAAGAAGAGTAA
GCGTCTCCTGATACTTTTGGTAGCAGTTTTACTCTTCGTGCTGGTGGCGG
TAGCTGTGACGGTAGCCTTGTTGGTGTACCGGGCGGACCAGGAAGTTCCT
TCGGTTGACCCGTGGCTAGGAAGCCGCCTACCGTCCTCACTGGTCCCGGT
ACATTACCAGATCGAGCTCCAGCCTGATCTGAACACGTTCACTTTCGTCG
GAAGCGAGCAGATCACGATCCAGTGCCTAGAATCTACCAACTATATCTTG
CTGAACTCAAGACTTCTAAATATCACTGACGGGTCTGTATCACTACAAAC
AGCCACAGGAGAGGCTGTTAACGTTGAACGCTGGTTTCTGTACCCAGAAA
ATGAGTTCTTCGTGGTACAGTCTGCACAGAGATTGCGAAAGGGGGAAAAC
TACATTCTGAGTGTGTCGTTTTCGGGCATGTTGATGGACGACTTACGTGG
GTTCTATCGGAGTTCGTATTTGGACAGCCTTACCGGCGAAAGAAGGTACC
TGGCTACAACGCAGTTTTCTGCTATAGACGCCCGGAAGGCCTTCCCGTGT
TTCGACGAACCCGCTATGAAAGCAACGTTTGACGTCACTCTCGTCCACCA
ATCAGAGTACACGGCTCTCTCCAACATGCCGATACGGGAGGGCCAGTCTG
AGGCAAGAGAAGAAGGGTGGACAGCCGATCACTTCGATACCACTGTGCGC
ATGTCCAGTTACTTAGTCGCCTTCGTCATTTCAAACTTCACATACAGGGA
AAACGTCACAGGTCTCCATGGCAACATAACGCTGAAGGTGTGGGCCCGAC
CAGACGCCGTTGAAAACGGTGAGGTCGACTACGCAATCGCCGTGGCCTCA
CAAGTGTTGACGTATTACGAGGAATACTTCGGTATCCCCTTTCCTCTCCC
CAAACTTGACATGGCGGCGATTCCTGACTTCCCTTTCGGCGCCATGGAAA
ACTGGGGTCTCATCACTTATCGCGAGACTTCGCTATTGTACGACCCTTCC
GTCTCAACAGAGGCAAACAAACAGAGAGTAGCTGTTGTTGTCGCCCACGA
GCTCGGACATCAGTGGTTCGGAAACCTAGTCACTGCGGAATGGTGGGACG
ACATTTGGCTCAACGAAGGCTTCGCCAGTCACGTTGAATACCTTGGGGCG
GCACATGCGGAGCCTGATCGGATGCTGGTATGTGACGTGTCCGACTCCTA
TTGGATGGCAGTATGTCACGTGGTCTTTCTCGTTTTTGTTGTCATGCGCA
GTGGTTTGGGAATCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00036037-exon-Sc0000017-1564993656:3057462..3058136 | BlTCONS00036037-exon-Sc0000017-1564993656:3057462..3058136 | Branchiostoma lanceolatum | exon |
| BlTCONS00036037-exon-Sc0000017-1564993656:3059981..3060127 | BlTCONS00036037-exon-Sc0000017-1564993656:3059981..3060127 | Branchiostoma lanceolatum | exon |
| BlTCONS00036037-exon-Sc0000017-1564993656:3060504..3060642 | BlTCONS00036037-exon-Sc0000017-1564993656:3060504..3060642 | Branchiostoma lanceolatum | exon |
| BlTCONS00036037-exon-Sc0000017-1564993656:3061042..3061168 | BlTCONS00036037-exon-Sc0000017-1564993656:3061042..3061168 | Branchiostoma lanceolatum | exon |
| BlTCONS00036037-exon-Sc0000017-1564993656:3061581..3061735 | BlTCONS00036037-exon-Sc0000017-1564993656:3061581..3061735 | Branchiostoma lanceolatum | exon |
| BlTCONS00036037-exon-Sc0000017-1564993656:3062188..3062489 | BlTCONS00036037-exon-Sc0000017-1564993656:3062188..3062489 | Branchiostoma lanceolatum | exon |
| BlTCONS00036037-exon-Sc0000017-1564993656:3062924..3063058 | BlTCONS00036037-exon-Sc0000017-1564993656:3062924..3063058 | Branchiostoma lanceolatum | exon |
| BlTCONS00036037-exon-Sc0000017-1564993656:3063418..3063480 | BlTCONS00036037-exon-Sc0000017-1564993656:3063418..3063480 | Branchiostoma lanceolatum | exon |
| BlTCONS00036037-exon-Sc0000017-1564993656:3063612..3063678 | BlTCONS00036037-exon-Sc0000017-1564993656:3063612..3063678 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:3057462..3063678 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF017646 |
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