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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000017:3051634..3057019+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00036036 ID=BlTCONS00036036|Name=BlTCONS00036036|organism=Branchiostoma lanceolatum|type=mRNA|length=5386bp|location=Sequence derived from alignment at Sc0000017:3051634..3057019+ (Branchiostoma lanceolatum)
AGAACATTCCGGCCCAGAGCAGAGCGGGGCTTATTGACGATGCTTTCAAC
CTTGTTCGGTACGTCTGAATTTCGGTTAATGACTGTAGGATCATAACATA
CAATATCTGTTAAAAGTGATGATACGAGGGTAAGAATAAAACGCCATAGC
AATGTTCATTTCTGTATGAAATGAGTTGAAATTCGGAACAAAGGATCATA
TCTTCTTGAGAATGAAATACCTCAATTTATTGTTCAGATTTTTACGAGCG
ACTGAGTTGATTTTAAAATGAGATTGTCAGAACCAATAAACCTGCTATCT
ACAAAAGGAGTTTTATTCTGACTCTCCCTCGTACTTCGCGATGTAATTAC
AGACTCCTTACAAACAGGCATGAAACTTGAGGTGTGGTTTAGCGTACAGA
GAGGAAGATACAAATCCTTGTGATCCATGGGTTGTATGTACATCTCCGTG
TAAGTAAAGAAAGTTTTTTTTTAAATTATTGGGTAGGCCTACTACTCTCT
CTTCGCAGCCAGGGGCGCAATTGCGAGGAGCGCACAATTGGCGGGGCTAG
ATCGCAAGGGTATGGAGCGGCTGCCATTCGGCGCTAACTCCAGTGACCTC
AAGACGACAATTGCCCCATGTGCGACTGAAGGTTTTGAACAACTCACACC
GGGAAGGACCCCTACTCTTTTCGATAAGTGCGGTGGGTTCTTTAACGTGC
TCGAGGTGTGGCTCTCCTCAAACACGGGGCCTCCATTTAACGTCCTATCC
GAGGGACGTCCCTAACCGAAGCTAGGTACTCAAGTTACAGGAAAACATCA
TAGCCCTGTATATGTATGGGATGTTTTTCAGGTCGGGGGATCTCGCACCT
GCAGTCGCACTCAACCTCTCGCGATATCTGAAACGAGAACGAGAGTACCT
ACCGTGGCTGGCTGCCGAAAGGGCCTTCGGGTACTTACACATGATGCTGG
CTGACACAAATGGCAGTTCGGATCTGAAGGTGAATTGTGCACGTAGCACT
AAGTAAAACAGGACAGTTGAACAGTTTGAAAAATGATTATAAATGTGTGA
TGTTTGTTGCATAACGGTGGCTTGCTTGCAATGTTATAGTACCCTTGCCT
CTCTGCGACTAATACTATGGACTTGGCATAATTTTCAGGTCTACATACAA
AGCCTTGTGACGCCTATCTACCATGACCTAGGATGGGAAAATATCGGAGA
CCATACCACAATGTAGGTTGATACTTTTATGTGCTTTCTAAAACACTGCT
ATGTCCATGCGGAGAACAAAAAACAACAATTACCAGACTTTTGCTTAGTT
TACAATTTGGAAAGGGGGCACCGCCGGGTAGTGTACGAGCTTTTTTTTCA
ATTTCTGGCGTTATCCCTACATGGCCCGTGGGACACCCTGTGGATAACGG
ACTGTTTTGGGGCACAACCGGGACCCGGGGATTTTTTTAAAACTCGGAGT
TAAAATCAACGCGGTAACAAATAATCGCCGTGAGCTAATAGTGAGATCAC
AGAGAGGTACCCTTCCGTTGTCCGGCAGTCCACCGGGACAAATTTGTGTC
TTCGGGGCTCGGCCGGGACTACACCCCCGGTGCAAATGTGACCGTCGCAT
TACCCGACATTTATCACCGTTGGTAATTCCCAATTTTGGTGCAGTGAATC
GTATGTAATGTACATGGAATGGAAATATATCCTCGCAAATATTGCCATTC
TTATTTTTAATATGTCTTTTATTAACAGGCTTAACAGGTTAACAGTGCTG
TCAATGGCGTGTCGGTACGATCACCCAAAATGTCTTCAAGCAGCACGGGA
AAGAAAAGACGCTCTCGACAATGGCGACAGGTAGGTCTGGGGCCTGGGAT
CATTCACAATTGCTTGAAATGGACGTGTTTCTCATCTTCTTTTTCTTCCG
AAAGCTTTAGAACTTTAGCTTTAGATTATGTTTATTTCCAATGCAATCTA
TCAGAAAATTTAGACTTCTCTTGGCATTTTTCTGTACAGCGTGGAGCCCA
ATATGAAAGCAATAATTCTGCAGTATGGAAGCGACCGCATGGGGTCGGGG
TTGGTGGCCGCCATCTTGAACCGGTGAGCAGTAACGTGGCGATGTGAATT
ACTCCAAGTTCGACACACACACCAAAAATTCTTTAACTTACGCTGCGTTG
GTAAATGATTTTTTTTCCAAAAAGCTCATTACATAGATAGTTATCCTTCA
TGATATCATTTCGTCTATAAAGTACACAAACAAGCAACTGACTTATGAAT
CATGAGTCCGTTGATCATGTTGTAAGGGATTGCATTCGTCATCTTGGATG
GTAACGTAAAGCCAGTGGCCCACTGTACGAGGGAGCTTAATGCATAAGCC
TCAAACGTCATGACTTCTGCACGTAAAAGAACCCAACACACTTATCAAGA
AGAATAGGGGAGACCCAGTGTGCTTGGCTAAAAAAAGCGAGCCGACGAAG
CCGCATTGCACATCTAACACTTGAAAAAGCAATATGCTTTACCTCAATTG
AGGAAGACTGCTTTGATTATAGAAATAATGTTTTTATATTGACCAGAAAC
TAGTTTTTCTAGTGCTGAATCTGTGCAGGGTTTACAATCACATAATACAC
ATGGGCAACAGATACATATTTGCTCCACACTTGCGTTTTGTGGAACTGTC
GCAAGGGTCTGGGCGGCTGCCATTTGACGCCACCAGGTGACCTCAATACG
ACCATCCCCAAACGAAGTGAGGTGCCGATCCACACCTGGTTTGAGTGAGG
AAAGTCGTGTAAAACTACTAGTGCCTTTCCCAAGGGTACAAAATCGGTGA
CATGACAAGATTCGAACCCAGGACCACTTGGTTCTGAGCCGAACACTCAC
GCCACACGACCCCATGGTCCACTTTACCTTTACTTACAAACTTCTGTGGA
GTTTTCAGGACCAGGAGTCTGGTGGATTCGGGGCTGTTCACGAAGGCGGA
TTTGCTGAATAAGTTGATGACCTTGGTAGACACTAAAGAAGAAAAGATGC
TGGTTTTCAACTTTCTAAAAGACAACTGGGACTACATGCTGGAAGGGTAA
GTGTAAATAAGTTATTGGACTCACAGAATTGTAGTCCAGTCATTTGGTGT
TCTTTAGGATAGACGACGGCCAGAGGACTGGTGAAAAATTAGGGCAGTCC
AATGTCATACGTAGGAAAATAAGCGGACTTTCATTCATTTTATTCCTAAA
TGTTGTTTATCTTTATCGATGCTCACAACTTTCATAATGTTTCTTTCCAT
ATCTTATAGTTATAATAGTTCCAGAGAACCTCCTGAACTGATCTCCAAAC
TAACGGAGGAGTTCACCACACACAAGGACTTGAGACAGGTAACGTTTTCT
GTGACAATATTTAACAAATACATACAGTCAAATCAATATCAGTCTCTAAG
ATTATTTTCCATATTGACGTAACATCTACAAATATAATTCCACCAGGGTA
CATAATTCCGCCACCCTGAAAAGATACGTCCAAACAGATCTCTAACCCAA
CGTCTCGCAGTATTATGCACTCCTGTTCATGTATATCACTGTGCATACTT
GGGGGGGGGGGGGCTTAGAGGTCTCTCAAATCTACTTGTTTTAAAGTGGC
AGATTTATGTAACCCGGTGGATTAATGTTAATGGTGGTTATTCATTAAGA
ATACTAAAGTTTTGTTCAAGTCCCTCGAATGGTTTCTATACATAGGTTAG
CCTGATATATTTACTACAGACAGCTTTGCATCAATACATAGATTCACCCA
TGGCCAAAAGGTTTCATATCCAGTGAGGAGGATGATACTCACGTGGACTG
ATTCGTTTTGACAGTTCGAAGAGTTCGTGGCCAGTCATCTCAACATGGCG
TCTCGTTCTGACGTCACTAAGGCACTGGAGCGGATCCGCCAAAATGTCCT
GTGGAGAGAACGTCACGAGAATGCCGTCAGGGGCTGGCTGGCACAGGAGC
GACGGGGGAGGGGATAGGGTTACATTTTCTTGCTAATGGCATATTGTCTG
ACAATCCGTGCTTTTTCACGTACGAGGGTCAGTCACAAAGAAATACCCTT
AGTGTCATAGCAGGGTCATTTTTGAATGAAATTACATTTCTGCAAAATTG
TAACTCATTAAATGAACCTGCTATGACAAAATGCGTTTCTTTGTGACTGA
CCCTCGTATAGCTAAATACATTGAATAGCTACCATTCATTGCTACATCAC
TACCATCATAACCAAGTTTTAGCTTTAGTGTGTTCAATTAGACATTGTAC
CATTGGGTAAAGGGACCGGACATGCGCCTTAACTTCATGAAGTTTTTGTT
GCCATACCGAGTCATTTGTTTCTAGCATATTTATTAGTTCATTATATTTC
GTTATACGTTAGTGCATCATGTTTGTTATACAAGTTTGCATTATTATTTT
TTTCACTTTAATGTCTTGTGTATAGATGTTTTAGTGGTGGCGCTAATATA
AGTTTGTCAACTTGAGGTTGTCACCTATACGTCTGTCATGTCTTCTCACT
CGAAAAAAACCCATTCATTAGGAATTGTGCAATAGATCTAGAGAGTGTGT
AACCTTAAGCTTATAGATATAGACGTTAAGAAGTTTTTGTAATACCAGGC
AATAGTTTTTGTATAGATATCTTTTTCATACTATTAGAGACACATTTCGT
GTACTGTTTTTTACTCCTTTCTTTTTTCGTTGAAACCTATCAAGATTTTT
TGTCGTGTCAAATGTTTATGTTAGACTTAGCCTATGGATCTGTGTTTAGT
TTTCATTATCATTTTTTATATTCAGAACGGTGGGTGACCATACAGAAATT
TCTGTCTGATTATCTAATGTAGTAAAATATTGATTATAAAACACTCTATA
TATACCAGTACATGTAGCATATATCATACAGTGTTATGGCACAGTTTCTG
CAGCATTCAGAACTGCGGTTGACCATACGGAAATTTCTGTACCTAGTTAT
CTAATGAAATAAAGTAATGATTATAAAACGCGCTATACTAGTAGCATGTA
TAATACAGTATTATGGCACGCTGTATATACAAGTACACTGTAGTACTGTA
GTTTCACCGTTCTAAATTGAGCAGCTGCTGTAAGTTTTACATGTAATGTT
GTCTGACTTGCCCTTGATGACCTGCCAGGGTCAATCAACGTCAGAAACAA
TTGCCTGGCACCCAGCCGCAATAAGCTCCGTCGGCTCTATCCAAGAGACC
GTTGCAAAGACGCAGCCTTATACGGATGGATGCCAGGCTACAGGAACAAG
GTTCAGATCAACTCAACTCTGTGAGCAGCATGGCATTAACTAGCACAGGG
TGACATGTCTTACATTACAGCAGTTGAGATGTAATAATAGTTTCTCGTCA
CATTTTGTGACAAAGTTACGGACTGGGAAATATAAA Coding sequence (CDS) from alignment at Sc0000017:3051634..3057019+ >BlTCONS00036036 ID=BlTCONS00036036|Name=BlTCONS00036036|organism=Branchiostoma lanceolatum|type=CDS|length=750bp|location=Sequence derived from alignment at Sc0000017:3051634..3057019+ (Branchiostoma lanceolatum)
AACATTCCGGCCCAGAGCAGAGCGGGGCTTATTGACGATGCTTTCAACCT
TGTTCGGTCGGGGGATCTCGCACCTGCAGTCGCACTCAACCTCTCGCGAT
ATCTGAAACGAGAACGAGAGTACCTACCGTGGCTGGCTGCCGAAAGGGCC
TTCGGGTACTTACACATGATGCTGGCTGACACAAATGGCAGTTCGGATCT
GAAGGTCTACATACAAAGCCTTGTGACGCCTATCTACCATGACCTAGGAT
GGGAAAATATCGGAGACCATACCACAATGCTTAACAGGTTAACAGTGCTG
TCAATGGCGTGTCGGTACGATCACCCAAAATGTCTTCAAGCAGCACGGGA
AAGAAAAGACGCTCTCGACAATGGCGACAGGACCAGGAGTCTGGTGGATT
CGGGGCTGTTCACGAAGGCGGATTTGCTGAATAAGTTGATGACCTTGGTA
GACACTAAAGAAGAAAAGATGCTGGTTTTCAACTTTCTAAAAGACAACTG
GGACTACATGCTGGAAGGTTATAATAGTTCCAGAGAACCTCCTGAACTGA
TCTCCAAACTAACGGAGGAGTTCACCACACACAAGGACTTGAGACAGTTC
GAAGAGTTCGTGGCCAGTCATCTCAACATGGCGTCTCGTTCTGACGTCAC
TAAGGCACTGGAGCGGATCCGCCAAAATGTCCTGTGGAGAGAACGTCACG
AGAATGCCGTCAGGGGCTGGCTGGCACAGGAGCGACGGGGGAGGGGATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00036036-exon-Sc0000017-1564993656:3051634..3051691 | BlTCONS00036036-exon-Sc0000017-1564993656:3051634..3051691 | Branchiostoma lanceolatum | exon |
| BlTCONS00036036-exon-Sc0000017-1564993656:3052465..3052612 | BlTCONS00036036-exon-Sc0000017-1564993656:3052465..3052612 | Branchiostoma lanceolatum | exon |
| BlTCONS00036036-exon-Sc0000017-1564993656:3052772..3052845 | BlTCONS00036036-exon-Sc0000017-1564993656:3052772..3052845 | Branchiostoma lanceolatum | exon |
| BlTCONS00036036-exon-Sc0000017-1564993656:3053362..3053463 | BlTCONS00036036-exon-Sc0000017-1564993656:3053362..3053463 | Branchiostoma lanceolatum | exon |
| BlTCONS00036036-exon-Sc0000017-1564993656:3054542..3054679 | BlTCONS00036036-exon-Sc0000017-1564993656:3054542..3054679 | Branchiostoma lanceolatum | exon |
| BlTCONS00036036-exon-Sc0000017-1564993656:3054893..3054971 | BlTCONS00036036-exon-Sc0000017-1564993656:3054893..3054971 | Branchiostoma lanceolatum | exon |
| BlTCONS00036036-exon-Sc0000017-1564993656:3055448..3057019 | BlTCONS00036036-exon-Sc0000017-1564993656:3055448..3057019 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:3051634..3057019 + |
Properties
| Property Name | Value |
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| GeneID | BlCUFF017646 |
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