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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000017:3016850..3024976+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00036028 ID=BlTCONS00036028|Name=BlTCONS00036028|organism=Branchiostoma lanceolatum|type=mRNA|length=8127bp|location=Sequence derived from alignment at Sc0000017:3016850..3024976+ (Branchiostoma lanceolatum)
GTCAAACCCGGAAGTGTCAGGACCTGCCCGGTCGTGTCCCGTTTACACAA
GAAAAACAACAACAAGGGAAAGCAAAACAACATAGCAGGTACGGATGATT
GTGTACTATTAATATGTTTTTAATGCAATTTCTTCCGAAGTATGTAAGGA
GCTGACGATTCTAAATTATTCCCAAAACACCATTTGGACGATGCCCCCCT
CCCACAAATTATAACCATGCAAAGACAGCAAATCATGTCCTATTCCAAAA
ACATGAAAGATGATGGGGGCTAAAAAGATTGCCTGGACAGGGAGTATGGG
TCAAACAAATCTTGATCGGACGGGGTTGGGTCAAGCAAATCTGGATAATT
GGACAGGGCTGGGTCAAGTAAATCTGGTTTGGACAGGGGGTCGGTCAAAA
GCTGATCTCAGAAGTACGATTTGTGGCTTGCAATATTCTTAAACTTGAAA
CGACGAAGAATTCTTTACTCCGTTGATGAAAAAACCCTACCCATATGACC
CATAAAAAAGATTGCAAAGAATAAGACCTACATGTATAACATTGATCTCT
GATCTGATGTTGCAGCGCCTCCATGAGAACGCTGTGTAAACTGCAGGCAG
GAGGCCAATCCTTCTACCTGCTGACTAATGTGGTCCAGAACGGCAGGGAA
GGGTTCCAGCTCACTCTGTGTGACGGACTGACAGCATGGACTGGACATGG
TAAGGGCAACGTTTCTTTCTTTATCTATTGGTTCCAACTTCGGCATGAAC
ACCTTGTTGCACGAACAGCCAGGGTCGCCCAACTACTAGTAGCGAATGGC
TGTTGTTTTAAGGGTATTAACGCTGGAAGACCGTTTCTTACAGAACTGAA
GGGGGAAAAGAATGGAAGTGTATGTCCCTGTGGCGCAAGCGGTAATGCAA
CTCTACTGCTTGGCCATCTGGATCAAATTCCGTGGATCTGTGGGCCAGAG
TTCAATTCTAGGGTCGGCCCCAGCTCGGACATGTTGTCATTTCAGATGGT
GACGTAAAGCCAGCAGTCCGGTGTATGAGGGAGCTTCAGACATAAGCCTC
TGCTCTATCTGTAAGCCTAAAGCGTCAAACCTAGAGCAGATGCACTCAAA
AGAACCAATCACACTTATCAAGAAGAGTAGGGGTGACCTGGTGTGCTTGA
CCAAAAACGCGAGCCATAGCAAAGTCACATTGCACTACTACTATAGCTAC
TTGAAAAAGCATCATGCTTCAACTCAGTTGAGGATGCCTGCTTTACCTTT
ACCTTACCATGAATGCACGAGCCCAGTGAAAAATTTCAAAACACATTGTA
CAAATGTATAAATACAAATGGAAAGGGCAGAAAGAAATCTTCTTCAACAT
TTTCTCTTGAAGCTAAGGGTTTCAAAGAGAAGCTATTACATGTGCAAAGT
TTATGTGATGATTATGAGAAAAGAAGTAAAAGCCTTAAAAAGCAAAAGCT
TATTTGTACATTTGTTTATCACTTTCCATCTTATTTGTTGACAATTTGCA
GTTGACGGAGACGACATGCAGGAGATGGCGGACGAGTCCGGGATGGAGTT
CGAGACGTTCGTTGCGGAGAGCGTGAGGGCGCTGACGCGGGAAAACATGG
GTGACATCACCTTCCACTACTCTGTGGAGATTCAGGAGGAAGATGTCACA
TGCAGACAGGTAGGTCAGGTACTGTGGTGTACTGTATGTGGTTGCTTATC
AACGCAAAGTACTTTACTTTTGGGACTTCATCTGTTAGCAGCAACACCTA
TTGCTCCAGTGCAATGTGAACCAGTTAGAATTGCCCTGATGAAGGTGACA
GATAGTCACTGAAACGTTGGTTGAACCAAACACTTTTTTGTGTACAAAGA
GTCTCTTTATTCATTGAGTTATAAGAAACCAACTATTTGCAAAGTCAACC
TCTTTATCAATGAAAGAACAAATGATTGAATCGATGGATGGATGAATCAA
AAGTGACCTAATAATAATTTGATCACAAAGGTAACATTGTGGTATCCTAT
TCCTAAACATCCTTTGGAAAAAAAATTCTAATTTCTGTAATGTTTTTTCA
ATCTGTCAATCTTATTGTGTGTTACAGTTCTCTTGGAAGAAGTACATACC
ATCAGAAAAAGTCAGGGTAAGTGCCTGTAAAGCAGTTTTGTTTCAAATAT
TGCTTGTAGCCAAGGTGCCATCGTATAATTACCGGGGCTCCTACTAGTAG
TATACTCGCTACCCTGAAAAAATCATCTGGGATTGCTTGACCTGGTTTGG
TTTTTGAGTTAATCTTTTTAAGTTGATTTTTTCAGGGTAGCAAGTGTAGG
AGCCTCGATAGTAATCGGATGGCACACAGGCTATATTCCTTGTACAAGAC
AGTAGGAATAACAAATTAAAAGCTACAACTTTACACAACTTCTAATCCTA
CGATTGCTGAAATGTAAAAGTGTGACAGTAACTGTGTTGTTAGAATACCT
TTCTTCTCTGTAGACATAATAAGTTTAGATACATGTGTTTGACATTTTCA
GCTCCAGAAAGTTGATGCTGGTGAGGTCATCACTACAGGTTGAAAAGTAG
ATGTTGGTAAACAATCTTATTGTCTAGTTATTTGGTTGTTGTTTGTTTCT
TATTTGTCAACAGGACCACTGGAGCAAATCTTTAACCTTCTTCCTCCTGC
TTGACCTTGTTATCAGTACAAATTTGGTGCCAGAAGGTCATCTAAGCAGG
GAGAGAGTTAAAGAAGCTCCTAATGCTGGAAACAAAGCAGCTTAGCCATA
TTTGGACGTCTACAAGGAGTTAGTGTTAAGAAGTTTGTTTTGTTACATCT
GTTTGTTACAATTTTAGACAGTACAGAATGTTTATATCATACCTGGGCTG
CGATAACGTTTAATATGGGTGTTCCGGACTGGTCCATATTTTACGGTATC
CCACAGGATTCTACTTGTATCCCACTGGCTTCCATTGAATAATTTGAATG
CACTTCACATATGCCCAGCGCTCGTGAGTGCGACTCGCACACAATATGTA
TGCGACCAGTTTCTTGAGAATGCGACTAGATTTAAAATCACGGTCGCACG
GTGCGACAATCCAAAATTAAGACCTGCGCCAGGATAATGGCTGCAGAACT
AAGCGGTAAGCCGAAAATATAGGTATTCCAATGCTACCGCGAATATCGTC
GGTGAATTTTCTATCATGTTCCCACACCCGCGGTACAAAAACTATCCGTT
CCTAGTGGCAAAGTTACCCATAGAAATAAAGGATATAAGTTTCTCTCATT
TGTGGTGTATTTGTTTGATTTGTAAAATGTTTCAAACGTCAAAACTTTGT
CGATGAAAGTGAGCGCTCGCCGGACGCTCGCTGTTTTCAATGGCGGCCAT
GATGTTTATGAAAAATAGACCGCAGCAGAATGAAAGGCTTGTTTCCTGCG
GTCATATTTATACCTGTTCAAGCGATGATTTTTACGATCAAAAATTGATG
AATCAATTCAAGTGGAGTTTTATTTAAAAAAATATCAAATTTTCCTTTTG
TCACCGGTATCATTTCAAAGCTCATTACCTGCCCGTTGTTATGGTGCTGC
ATGTACTTTCATTCTGCTGCTGTCTATACTGCACAGCGGCGAATCACAAA
GCTTTCCCCATGCGGTCTGCCTGTCATTGGATGACGGCGCCGCGCGGTCC
TGACGCGCGAAATTTGAACTACGCGTTTCGAAGTTCCCGATTTGACTGGG
TCGGCACAAACAGATCATTTTTGATACTATTTTGAGCAAGAATTTTAAGG
ATATTAAAGTATTTTGGATTATCTGTAGACAGAGGGTGAGGGTAAAAAGA
AAAGAAATGCCTGTAAAAATGTTGAACTTGATGCCAGCAGTGAAGTTTCA
AATTATGGAATATGACTTTATTTGTTTTGGTCATGAACCCAATAGATAAG
TTCTAGAGTCATCTATTTATTTATCATTCAAGGTTATGTGAATCATTACC
TGCCTTGTTCCAAGTAAAAAATACCATTGTGTATTTTTCAACTTGTTGAA
CTTGAGGCACCGTGGCCCCCGGATAGGGGCCAGCCGGGGAACCTATGCCC
AATTTTTCTAAAAATCCATCGTACTAGTATCAGTATGTAGGAAGGTATTG
AATGAATTGAATTGCCAATTGTTCTGCACCATCAATGTAGGTTTTTATCT
TTTATGATCTATTCAAATACTTTATTCCCGGTTGTTAACGTATAACATTG
ATTAATAGGAGTATTATTTGGTATAGCCAAGACTTTTGCTTGTTCTTCCA
ACTTTTTGTAGTGGTGCCCCTAGATTTTTGCTGGTGCTCCTAACTTTTTT
GAGTTAGGAGCACAGTGCTCCTAGGCCTAAAAGTTAGTCTGGAGCCCTGT
ATGCTGTCGAAAATTTGAATACCAAATTGGAACGTTGGAATGAGTGTTGT
TACATCTTTTTACATCATGACACAAAATTTTCTCAACCTCAGGTGCATTT
AAATGTGTGTTTTTTTTGTGTGGGTATGACTGTGACATAAATAAGATACA
ACACAGTGTACATGTATTCCTCATCACTCTCAGTCCCAGCCCTCCCACAG
GTTGGAATGCCCTCTGGCCTTTGGGCGATTTGACCCGCGGTTGGGCTAGC
ACCTTGGGTGATATTGAATACTCTGTGTGTCATTCTCTTTATACAGACCG
GTCCGTTACACTCGTATCGAACATAATCCCAAGCCAGGTATGACATAAAT
GTTGTTGTTTACCTGTTCGTTGTTGTTGTTCCAGTTCCAGTTGGGCAGTA
TAAAACTGTGTGAGGCTGTGACTCCTAGCGAGGCCATGCAGCAGATATTT
GACCACGCCCTGGGGAAGGTAGAGGAACTGAAACACACCATCTCAGATGT
ACAGAAGGAAAAGGACAGACTGTCAGGGGAGAGGACCAAGGCACTGGAGG
TGGGAAGGCAGTGGACTCCAAATTTATTTTCGGGAATAGTTAACCTAAAG
ATTTGAGTGCACAGAGGGAATTTGGGGTGCACAACATTGGGTGCACAACA
TAAAATAAAGTAGAATGTAAGCAAAACATAGTGATAAACCATCTAAAAAA
AAGTCAATCTGTAATTCTATAGCCAAATAAAACCCTATGGTGGCCAAACT
CGGGTCTAGCAAATTATTTTCCCTAAAGCCAACGTAGTTAGTCTGGTAGA
GTCGACAGTCTCACATAAGCCCTTTTTCTTTGTCTCTTAGCATTACTAGT
ACAGCTCTGATTATTTAACCCTCTCCCTGCTGCCTAACTATAAGTTGTTT
TTGATCTGTAGCAAAATTTCTTACCTGTGAATTTTTTTCCGTATATTGTT
GTTGTAGAGGCTGGAAAAGTATGTGGCACAGAAAGAAGAAATGGAACGAG
ACCTGTACGCCAAGTTTGTTGTTGTCGTCAACGACAAGAAGGCCAAGATC
CGTCAGCTGAAAGACGAGCTGGCGCAGGCGCGAGAAATGGGAACTACACA
ACAATCCAGGTATTTCGACTTTGACATTTTGAAGATTGCCAGAAATCTTA
CGGAATTTTTTTCCAGTTGTCTTTTTCAGTGGCCATGGTTTCAATACGTC
TAGAACTAGAGGGCCCACTTCTGTCACTTGTTTCCAATTCAAGCCACCAC
AGGACCTACATGTTGTATGTACCAAACAAAAATTGTAAACATAGCACAAG
ATTTCAAAACCGGAAGTTCTGCTGCAGTACCATAGAAAGCTGCTAGGGGG
CCAAAAATCCAATCATTTTGAGGCCTCATAAAGACCTACCCACATGCCAA
ATATCAAGACAATCCACTAACAAGGCATTCTCAAGTTATACAATGTAGTG
TCAACAGACAGAGACACGAACGCTACCAAAAACATAACCTTCTTTGCGAA
GGTAATAAGGCTTACTTACCATTCAGGCTACTTTAATTGTAAATTTCAAA
CATCAAGTGAATTTTGTGAACTTTCTTTTACCTCCCAAATAGTTTCCAGA
TCTTTCAATGGTTTTAGTTTTTTTTACCAGGAAAGTCAGCCAGACCAAAA
AACGAGATGCCCCTTCAGACTCAGGCGACAATGACACAGACAAGAACCCT
GACAGCGAAGACGACGGCGACACGACAGACGAGGAACGACCGCGGAGGAA
GGTGTGGAAGAACACTGCTGGGGGTGGCGGCGACCTTGACCTTGAACTGG
GAGGAGAGGACGAAGAAGAGGCTGACCTTGAGCCTGCTGCTAAGAGGTGC
AAGTTAACCTTTGAACTCTCACCATTTTTGTCCATGTACATTCTGCATCT
GTATTGAATACCTGAATGAAGATATAAATATGTATGATATCATGTCATAC
CTAGAGTGGGCCATGATGACTGATGCTAATTTTATGGTATCTCTTAAGCT
TCTAATTGTATCACACAAGCTTCCAAAGAATAATTTTTGATAATATCATG
ATGCACTTCAAATGGGCTTTACGTTTACCACTGTCGAAAATTCGAACATG
GGATTCTGACAGTGGAATTGATGTGAACACAATGGTTTCTTTGAGGACAC
ATAATTTTCTCAACTCCTGGCATATTTCACATTGAAATGTGTGTTTTCTC
GGGTGGGTATGACATTAGAAGTATACAACATGGTGTATTCCGCATCACTC
TCAGCCCCAGCCCTCCTGTGGGTCGGATGGCCCTCTGGCCCTTGGGCCAT
CTGGCCCACAGCTAGTACCTCAGGTGACACACAATACACTGTGTTGTATT
ATACATTTGTATATATATTTATTACTGGGCTTCTGATGTATCTATCATGT
ATATTTCAGGAGGAGAAGAAGAGATCCCGCTCCTAAAAGAGACAAAGGAG
TTTCCAGGCCAACCATTCCAAAGGGAACCTCACAGCGAAGCCTGTAAGTA
ATACTAAATACTGTGTTCCAACTATTTTATTTTATTTATTGTACCAACTG
TGCAGCAATATGTCATTAGTAATGCATTGTGTTTGATATAGTACCCACAG
ATACATTGAGTCTTGTTTTGTAAACTATGTAAGCAAACCCCAAAGCAGAA
ATCAACAGCAGATATTGGAATCCAGTTGGAAATTCAAATAATGAGGCAAC
AGTAAAAGACTGAATATAGCTAGGGGTCCAAATCTATTCATTTCTTTGAT
ACTTCAAGACCCGATATCATACCAAATATCATAGCAATATCATATTGAGT
TATGCTGTATAACCACAGATGTGCACAAGAAAAAAAATCGTCTTCTTCAT
GTAGGAAAAAAAATGAAGTACATGTAGATGAAAATTCTTCTCTGTGAATA
ATCAAGCTTATGATTTTCATAAATCTATTCTTTTACATTTTTCAGATCTG
GAGATAGGTCCTCTCCCTCAGGAGTACCCAAAATTCCCAGCCGCCAATCA
TCTGGCAGGTCCAACAGGTCAGGTGACCTTGACCCTGATGACCTTTTTGA
TGAGTTGTAAAGAGTCACCTTTTGTCAAGTATGTGTTTCACATGTTTAGT
GAAAGAATGATTACAAAAGATATACTGTCTTATAAATTGCATGTAAAATC
CATGGACCAAATTCAGAATTCCAAGCTTTTATAGCATGTTGATTGCAATG
AATTTGATTATCACTATAGTATAGCAGTAGAAAAACTATTTGATGAAATG
ATAGTTAGAAACATTTATCACTTTTATAATGAATTGTAGTTTACAATAGT
ATCATACAAGTAGAAGTAGAAGAGAATGTAATATTGTACTTGTTTGGTAA
ATTGTTGGATGTCATCATTGCTAAAAATGTCTTCAATGTATTGGCATAAC
ATAGCATCTAGATATGATCAAACATGGGAATGAAATATGAACCACATGTA
TTTAATGATTCTTGCATTTGAAACCCTGAAATATTCAGAACATATATGTA
CATGTACAATGTAGTCCATATCAGGTATTCTCTGCATCTGTATGTGTTTT
CATTGTAGGATTCTCCCAAAAATGAAATAAAAGAAAGTTTGATTTTTCTA
ATGCATGCATCTTTATTTAGATTTAAAATGGCAGTATTACATTTGAGTAA
CAAAATGTAGCAACTTTTTTCTACAGTTGTCTAACTGACCTCACACCAAG
AAACTCAATGACTTCTATATAAAGATATCAACTATTGGCTGTAACAGTCT
GACTGATATTGCATTTGCATGTAATCG Coding sequence (CDS) from alignment at Sc0000017:3016850..3024976+ >BlTCONS00036028 ID=BlTCONS00036028|Name=BlTCONS00036028|organism=Branchiostoma lanceolatum|type=CDS|length=1149bp|location=Sequence derived from alignment at Sc0000017:3016850..3024976+ (Branchiostoma lanceolatum)
CAAACCCGGAAGTGTCAGGACCTGCCCGGTCGTGTCCCGTTTACACAAGA
AAAACAACAACAAGGGAAAGCAAAACAACATAGCAGCGCCTCCATGAGAA
CGCTGTGTAAACTGCAGGCAGGAGGCCAATCCTTCTACCTGCTGACTAAT
GTGGTCCAGAACGGCAGGGAAGGGTTCCAGCTCACTCTGTGTGACGGACT
GACAGCATGGACTGGACATGTTGACGGAGACGACATGCAGGAGATGGCGG
ACGAGTCCGGGATGGAGTTCGAGACGTTCGTTGCGGAGAGCGTGAGGGCG
CTGACGCGGGAAAACATGGGTGACATCACCTTCCACTACTCTGTGGAGAT
TCAGGAGGAAGATGTCACATGCAGACAGTTCTCTTGGAAGAAGTACATAC
CATCAGAAAAAGTCAGGTTCCAGTTGGGCAGTATAAAACTGTGTGAGGCT
GTGACTCCTAGCGAGGCCATGCAGCAGATATTTGACCACGCCCTGGGGAA
GGTAGAGGAACTGAAACACACCATCTCAGATGTACAGAAGGAAAAGGACA
GACTGTCAGGGGAGAGGACCAAGGCACTGGAGAGGCTGGAAAAGTATGTG
GCACAGAAAGAAGAAATGGAACGAGACCTGTACGCCAAGTTTGTTGTTGT
CGTCAACGACAAGAAGGCCAAGATCCGTCAGCTGAAAGACGAGCTGGCGC
AGGCGCGAGAAATGGGAACTACACAACAATCCAGGAAAGTCAGCCAGACC
AAAAAACGAGATGCCCCTTCAGACTCAGGCGACAATGACACAGACAAGAA
CCCTGACAGCGAAGACGACGGCGACACGACAGACGAGGAACGACCGCGGA
GGAAGGTGTGGAAGAACACTGCTGGGGGTGGCGGCGACCTTGACCTTGAA
CTGGGAGGAGAGGACGAAGAAGAGGCTGACCTTGAGCCTGCTGCTAAGAG
GAGGAGAAGAAGAGATCCCGCTCCTAAAAGAGACAAAGGAGTTTCCAGGC
CAACCATTCCAAAGGGAACCTCACAGCGAAGCCTATCTGGAGATAGGTCC
TCTCCCTCAGGAGTACCCAAAATTCCCAGCCGCCAATCATCTGGCAGGTC
CAACAGGTCAGGTGACCTTGACCCTGATGACCTTTTTGATGAGTTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00036028-exon-Sc0000017-1564993656:3016850..3016937 | BlTCONS00036028-exon-Sc0000017-1564993656:3016850..3016937 | Branchiostoma lanceolatum | exon |
| BlTCONS00036028-exon-Sc0000017-1564993656:3017415..3017548 | BlTCONS00036028-exon-Sc0000017-1564993656:3017415..3017548 | Branchiostoma lanceolatum | exon |
| BlTCONS00036028-exon-Sc0000017-1564993656:3018351..3018508 | BlTCONS00036028-exon-Sc0000017-1564993656:3018351..3018508 | Branchiostoma lanceolatum | exon |
| BlTCONS00036028-exon-Sc0000017-1564993656:3018927..3018965 | BlTCONS00036028-exon-Sc0000017-1564993656:3018927..3018965 | Branchiostoma lanceolatum | exon |
| BlTCONS00036028-exon-Sc0000017-1564993656:3021584..3021748 | BlTCONS00036028-exon-Sc0000017-1564993656:3021584..3021748 | Branchiostoma lanceolatum | exon |
| BlTCONS00036028-exon-Sc0000017-1564993656:3022157..3022308 | BlTCONS00036028-exon-Sc0000017-1564993656:3022157..3022308 | Branchiostoma lanceolatum | exon |
| BlTCONS00036028-exon-Sc0000017-1564993656:3022830..3023045 | BlTCONS00036028-exon-Sc0000017-1564993656:3022830..3023045 | Branchiostoma lanceolatum | exon |
| BlTCONS00036028-exon-Sc0000017-1564993656:3023609..3023692 | BlTCONS00036028-exon-Sc0000017-1564993656:3023609..3023692 | Branchiostoma lanceolatum | exon |
| BlTCONS00036028-exon-Sc0000017-1564993656:3024145..3024976 | BlTCONS00036028-exon-Sc0000017-1564993656:3024145..3024976 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:3016850..3024976 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF017645 |
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