BlTCONS00022394 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00022394
Unique NameBlTCONS00022394
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000008:2381892..2383963-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00022394 ID=BlTCONS00022394|Name=BlTCONS00022394|organism=Branchiostoma lanceolatum|type=mRNA|length=2072bp|location=Sequence derived from alignment at Sc0000008:2381892..2383963- (Branchiostoma lanceolatum)
TTTTCAGCCAATGAAGATGCAGATGAGTCAGACGTTCAGCCTGGTTTCCA TGGCAGCACTGCTGTCAGCGTCCTTCTGTCTGATCGCCAGCGTGCAGCAC CAGCCCTGGAGTCCTGGGAACGAGACCTGGGGGCCTGGGGACGTGCTGGA CTGCTCCAACCACTTCGTGCTGCAGAGGGTCACGGACACAACCCACGGCA GGTGAAGAATAGGTTATACTGGTGATAGGTCTGCTGTTAGAGTTTCTTAC TTAGAATTTAAAGGTTCTGGGTTCAAATCCCTTCCGAGAAATGATGAACA AATAAGTACATGTGCGCTAATTGCAAGGACTAGTACGTAAACAAGTACGG AATCTATTTTGTTTTAAACTATCCAAAATCATATTCCGAATATCTCAGTA TAATCCTTTTGCCCTTTTTTTAGATATTACCAAGACACTGTCCTTCCCAC GAGCGAAGTCTCGCCACAGCTGGCCCTCCGGACTGTACTGCTGCCCAAGC CGGTAGAGGTCGCTCCTGACGTCACAGGCTTCCAGTATGCATGGCAAGTG TTGATTATTGGTTTGCTTAAAGGGGAGGTATTAGAAATATGGGCCCTAAA ATACAACGGTAGTGCATAGCCCCTATCTTAAGGTGATGATGATCTTAGGG TAGCAATTTGGCTTTGTGTTTGAACCTTGGTAAATGCACTCTAAGCAAAT TTCCTCCCTCTACTCGGGTGATAATGAGACAATGTTCGTGAGATGTGCTT TTTTTGTCCAATGGTCGTTAAATGTATGTGCATAAGATAAGATAATATAA GATGAAATGATGTGTCATCTGTCATTTGCACGACAAAAGAAAAATAGTAC GGCGTGTGTGAATATATGCTGCTTTAAGCGTACTCCGCATGTCAAGTAGG GTCAAACAAAAGGAGGTGCTGAAACCCTTGTCAATCTATCGTACTGTACG GAATCTTCTAAACAAGTGGAGCTCGTGGCACCACACTCTTGGCAGCAAGG GCTCTCAATAGCCCTTCACGGTACTTTAGACACTTGTGGGTTGGAGTGTT TATAAGATACTAGGAGCGAATACTGGGTGTGGTTGTTACCAATACCTAAG GTCAAGGTTTCTGAAGTTGCAATTGCAGTTTGGGGCCAGGTGGCTGTGTC CTTTACTGTACTCATTTGCATATTCGTGATCCCACAAATGATACACTGAC CCTTCTATCGTGCACCAGACTTCGAGCTTCTTATCAAATGTAAGGCAAAA GTTAGTCAGCTGCAGTTTGCGTTATTAGTTAAGTTAATCCGTGTTTAAAA GTTACATTTTGATTATAATTATTTTTTATGCATTCTGTTTTTACAGGTCT GATGACGTCCGAGCAGCGACAAGGTCGCAGCCGCAAAGGCTCACGGGACA GATATGACGCTACACCCAAAACCGTTCGACCTTTAATAGAGAAACCTGTA TCTATGGAAGTTTCATTATAAATCAAAGCAAGGTCTCAGCGTGTTGAAAG GGAAAATTTCTAGCCAACTCTACTTCACATTATATAATACTTTTTTTCAT TCATTCATTTTAAAGCCAGATAAGTATCTTCAAGAAGTAGTCTAGTTAAA GATGCTCATGTTTAGTTTTTTTCGTATTGCAATATACAAAGTAAAGATAC AAACATTCAATACACAGTGGCGATGTGGTCAAGCAAACTGTATATTGTTA CTGGCACCACATGGAAGATATACATTTTTTTTCATAGTACAAACACATGT AGACAGGGACGGTATCGTCTTATGAATTTATACAACCGATTTGATGTAAA CTAAAAAAATGCTAAAAAGACTTTGGTAAGGTGCAACTGAGGTACCTATA GCTGACAAGTAAAATGATTATGTTAGTTAAAGTGCTAAGAATAAGATTAA GTTTGTCGTTGCTTTTGCTTTATATTTCGCACTGTATGCACTTGATTTGA ATATGGTGATTATTGTTCTGTGTAATTTGTCGTTCTCTAGATTTTTGCTG ATTTTACTTCTTTTGTATTTTGTTACGTTACAATATTTTTCTTGACAACG GGGTGATAATCCTTGAAACTTG

Coding sequence (CDS) from alignment at Sc0000008:2381892..2383963-

>BlTCONS00022394 ID=BlTCONS00022394|Name=BlTCONS00022394|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000008:2381892..2383963- (Branchiostoma lanceolatum)
TTTCAGCCAATGAAGATGCAGATGAGTCAGACGTTCAGCCTGGTTTCCAT
GGCAGCACTGCTGTCAGCGTCCTTCTGTCTGATCGCCAGCGTGCAGCACC
AGCCCTGGAGTCCTGGGAACGAGACCTGGGGGCCTGGGGACGTGCTGGAC
TGCTCCAACCACTTCGTGCTGCAGAGGGTCACGGACACAACCCACGGCAG
ATATTACCAAGACACTGTCCTTCCCACGAGCGAAGTCTCGCCACAGCTGG
CCCTCCGGACTGTACTGCTGCCCAAGCCGGTAGAGGTCGCTCCTGACGTC
ACAGGCTTCCAGTATGCATGGTCTGATGACGTCCGAGCAGCGACAAGGTC
GCAGCCGCAAAGGCTCACGGGACAGATATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00022394BlTCONS00022394-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00022394-exon-Sc0000008-1564993656:2383763..2383963BlTCONS00022394-exon-Sc0000008-1564993656:2383763..2383963Branchiostoma lanceolatumexon
BlTCONS00022394-exon-Sc0000008-1564993656:2383421..2383540BlTCONS00022394-exon-Sc0000008-1564993656:2383421..2383540Branchiostoma lanceolatumexon
BlTCONS00022394-exon-Sc0000008-1564993656:2381892..2382617BlTCONS00022394-exon-Sc0000008-1564993656:2381892..2382617Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000008genomeSc0000008:2381892..2383963 -
Properties
Property NameValue
GeneIDBlCUFF010729