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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:37654..41989- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00009909 ID=BlTCONS00009909|Name=BlTCONS00009909|organism=Branchiostoma lanceolatum|type=mRNA|length=4336bp|location=Sequence derived from alignment at Sc0000003:37654..41989- (Branchiostoma lanceolatum)
CCCGGTTACAATACACAGTCCTGGTGCAAGGTAAGCTGCCACGCCCGGTT
ACAATACACAGTCCTGGTGCAAGGTAAGCTGCCACGCCCGGTTACAATAC
ACAGTCCTGGTGCAAGGTAAGCTGCCACGCCCGGTTACAATACACAGTCC
TGGTGCAAGGTAAGCTGCCACGCCCGGTTACAATACACAGTCCTGGTGCA
AGGTAATTAATGTAATTAGTGTTGAACAATTTAAACAAAGAGCAAGTAAG
TTAGGTCCAATTTAAACAAAGAGCAACCCGCCCAGGGTTGATTTGGTTGA
GATACAAAATGTCCAAATGATGCATCTTGCACAAGTTAACTCCAGTGTCT
CTCCACAGCAGCCCCAACTGAGTTATGAATGACCTTTAACCCTGACCTAG
ACTGAGTATGAATGACCTTTAACCCTGACCCCTGTTGTGAGTCACAAGTT
AACTCCAGTGTCTCCCCACAGCAGCCCCAACGCTTCGGAAAAAGACGCAC
GTAAGTTTTCCATTTTATCTCCTGCCTGTCGCTGTGGATGCATTTAATGC
TGGCAACATGTAGCCATTGCACACATGTACAATTATAGTAGCAGCAAAAA
TGTACAATGGACCGATCCAGTCGAACACCATATCGAACATATAGAACCCC
CTGTTCTATTTGGAACACCTCCGTCAAGAACAGCGCTAGTTGGACAGAAA
TGGCACGTGTTAAGCAGGGTATGTACATCTGTCACAGGCTTTCCATTACA
TTGGCTGCATGTATGCTCAGGAAAAAACAAAATGAAACAGAAAATGGCTC
GGGCACTCATGGGGAGGGAGCTTGTAACACATTGCCAACTACTACGAAGT
CCGCGAGTACAGAGTTCCGCCTCTTATGTACTTGTCTATGAAACTGATTA
ATAATGAATGCGACACGGTTAGTAAAAGAATTGCATTTTGATAGTAAATT
ACTAAAAGACATGCAGCTGCAATTCATGCAGTCAACACAGTGGGAACCCT
GTCACAGATATACGTACCCTGTTTTACACGTGCAACGGCTGCTTGTCAAA
AATCGGGCACTGATGGTCACCAACAAGGTAATGATATGCGACGCAGTCCG
CTTCCACATTGACCGAAAATATTACGCTCTCGTCGTAACAACATCTACCC
CCTCCTCAAACAACCCTACTCAGTGGATACAGCCGTCCACAAGGAAGGCA
TAGCATTTTTTTTGGTCCGGTCTGAAAGCCAAAAAAGCTCAACAGAAGAT
AGTCTGCATATTCGACAGCCAAGCGCGCACGGCCGTTTTTGTCCGTCAAG
AGCTGTTTTTGACGAACTATTCGAAATAGAACAGAGGGCGGGGCTTCTAG
TGTTCGAACTGGATCGGTCCATTATAGTAGCAGCAAAAATGTAGCCATTG
CACACATGTACAATAGTATTACAGCCGAAATGTAGCCATTGCACACATGT
ACAATAGTAACAGGCAACATGTAGCTTTTGTAATTGCAATTAGGTAACCG
TAAGGACTGTAATTATTATCAATTTTCATAATCATAGTCGACTTTATCCT
ATCAAGCAGGGAACTGTCAACTTTGACATTCATTTTACCCATAATTCCTC
TTTGCAGGACTACTGGAGGCGTGCAGGGATGGGGAGATCAGCATGGTGGG
TATCACACCGCCGTTTCGTTATTTTCTTACAAATGTTTTGGTTCGCTATA
AAAGTCCCTCTCCTTTGTTTTTATCATGGATTAAGTGTTTCATGTTTGTT
TTGTTTACTGATGTCTGTGCTGGTCAGGGTCAGGGTTGGTGTTGAGGTAG
ATGTAAATATCTAGTTGGATCCAGGTGAACCGTCAAAAATACACGCACCA
ATATACTGACCAAAAAATTGTCAATGTTTCGAAAGCCACAGCGCTCGCTG
ACAATTTGATGTGTACGAAATACCTACATGGTTGTGTTGGGCAGATCCTG
TAGATGTGAAAAAATATAAACATTATGTAGGTCCGAGGTCTTTTTGCTGC
ACGACGGACGGTTGTTTACACCCATGCAACAGGGTCAAATCGTGACGCGG
CAAACGCCGTAAAAAAGAAAATAAAGCGTTCTAGGGTGACCTGCGGTTGG
ACTGGGTGTTGGGGTCAGGGTTGGTGTTGGGGTCAGGGTTGGTGTTGGGG
TCAGGGTTGGTGTTGGGGTCAGGGTTGGTGTTGGGGTCAGGGTTGGTGTT
GGTGTCAGGGTTGGTGTTGGGGTTATGCTTAAATTGTATCAAATGCCTAT
GGTTGAGTGCTGACCTGTGGTTAGGGTTGGGATAAAATGCCTATGGTTGA
GTGCCGACCTGTGGTTAGGGTTGGGATAAAATGCCTATGGTTGAGTGCCG
ACCTGTGGTTAGGGTTGGGTGTTTGTTTATTTGTTTGTTGTGCCTGTGGT
TAGGGTTGGGTGTTTGTTTATTTGTTTGTTGTGACCTGTGGTTAGGGTTG
GGTGTTTGTTTATTTGTTTGTTGTGTTCCCAGCTGGTTGAGATGTTGCGG
AGCGGTGCGGACCTGGCCACGACTGACCCCCAGGGGATGACCCCACTGCA
CCACGCGGTGCGCTACGGACACAAGGACCTGGTCGAGTACATCCTCAAGC
ACGGTGGGGATGACCTCTGACCTGTGACAAATCGTGATAATCTGCGATAT
TTTCTGATGGAAATATTCTGTGCTTTGTTCTGTTCTGTTATGTTGTGTGT
GTTATGATGATGATGATGATGATGCAGGCCCTATGTTATGTTATGTTGTG
TGTGTTATGATGATGATGATGTGTGTTTCCTGCAGGCCCTATGTTATGTT
ATGTTGTGTGTGTTATGATGATGATGATGTTGATGATGATGATGATGATG
ATGTTGTGTGTTTCCTGCAGGCCCTATGTTATGTTATGTTGTGTGTGTTA
TGATGATGATGATGATGATGATGATGATGATGTTGTGTGTTTCCTGCAGG
CCCTCCGTCACTGCTGGAAGTCTCAGACTACGAGAAGTGAGTCTTTTATC
CTGACCTTTGACACATGTGTTGCCAGGTAACAGTAGTTAGCTGCATTGTT
TTGTTGCCAGGTAACAGGTTACAATAAAACCTTAAAGTTTGTGTATGGAT
CAATGAATGACAAGGAACATAGCATTCTGCAAGGTCCAGATTGGGGACCA
GTTACAGACTCCCGGAGGTGTTTTTTGTTGAAGGGGTCAAACTATGCTGC
ACAAAGCTTCACGGTTACAGTGGACTTGTTTATTTTTTGAGGCCTCGGGG
ACGAGCCTGATGGTAAAGTACCGTTTGTTCCAGGGGTCAAACTCCGCTGC
ACAAGGCTGCCAGCTACCAGAGAAGGTCAATCTGCTGCATGCTGGTCGCT
GCGGGGGCAAAGGTCACGTGCAGGGATTCAAACGTAGGTGTTACACCCAC
ACAGTTCTGTCAGATTGTTGGGGTTCTCGTTTAGAGCTTGTCGTTTACTG
TTGTTACCAAGGCAACAAACTCTGCTAAGGGAGCAGACCTCTCCTCTTCA
GCATGTACATTCAGTTTTTGTGCAACTTCCACCCAAACAAACAGTGAGTG
CGGGCTCCCTCTCTGTTCGAACTCTGTCCTGGTAAAGTTTCTACACTTCC
CCCACGGTTTGCGAAGGAGATTCAATTAGATGTTTACTGTTGTTACCAGG
GCAACACCCCCTGCTTACTGTCTCACAATTTGCTGTTTACTTTTGTTACC
AGGGCAACACACCCCGCCTGCTCTCACTGAAAGCTAACGACCGTGACCTT
GCCGACTACCTGAAAGGGCAGGAGCAGTATCTCCTAGCAACCACCGAGGA
AAACCAGGAAACAGCTGTCTGAGATGACCTCCAACCCCATATCCCAGAAG
CCACCTGATGCAGGACAGCTGCTTGTCAGGCTATCCCATAGTTCCTTGGG
ACTGACCTGTCAGGCTATCCCATAGTTCCTTGGGACTGACCTGTCAGGCT
ATCCCACAGTTCCTTGAGACTGACCACTGGATGGCCCGATATTACCGCCA
GGACTGATGCCCATATATGGACTGATGTCCTTATATGGACTGATGCCCTT
ATATGGACTGATGCCCTTATACGGACTGATGCCCTTATATGGACTGATGC
CCTTATATGGACTGATGCCCTTATATGGACTGATGCCCTTATATGGACTG
ATATCCACTATATGCACTGATGCTCTTATATGGACTGATGCCCTTATTTG
GACTGATGCCCTTATATGTAATTTGATGATGTCATGCAAACAGAAATTTA
ACAGCTGGGAAATAGGTGAAGTCTTAGGTAAATTAGAAAAGCAACAGGAC
AAGTTCATGGCCAATTTGCACAGCCTGTAACACNNN Coding sequence (CDS) from alignment at Sc0000003:37654..41989- >BlTCONS00009909 ID=BlTCONS00009909|Name=BlTCONS00009909|organism=Branchiostoma lanceolatum|type=CDS|length=474bp|location=Sequence derived from alignment at Sc0000003:37654..41989- (Branchiostoma lanceolatum)
CCGGTTACAATACACAGTCCTGGTGCAAGCAGCCCCAACGCTTCGGAAAA
AGACGCACGACTACTGGAGGCGTGCAGGGATGGGGAGATCAGCATGCTGG
TTGAGATGTTGCGGAGCGGTGCGGACCTGGCCACGACTGACCCCCAGGGG
ATGACCCCACTGCACCACGCGGTGCGCTACGGACACAAGGACCTGGTCGA
GTACATCCTCAAGCACGGCCCTCCGTCACTGCTGGAAGTCTCAGACTACG
AGAAGGGTCAAACTCCGCTGCACAAGGCTGCCAGCTACCAGAGAAGGTCA
ATCTGCTGCATGCTGGTCGCTGCGGGGGCAAAGGTCACGTGCAGGGATTC
AAACGGCAACACACCCCGCCTGCTCTCACTGAAAGCTAACGACCGTGACC
TTGCCGACTACCTGAAAGGGCAGGAGCAGTATCTCCTAGCAACCACCGAG
GAAAACCAGGAAACAGCTGTCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00009909-exon-Sc0000003-1564993656:41960..41989 | BlTCONS00009909-exon-Sc0000003-1564993656:41960..41989 | Branchiostoma lanceolatum | exon |
| BlTCONS00009909-exon-Sc0000003-1564993656:41490..41518 | BlTCONS00009909-exon-Sc0000003-1564993656:41490..41518 | Branchiostoma lanceolatum | exon |
| BlTCONS00009909-exon-Sc0000003-1564993656:40345..40382 | BlTCONS00009909-exon-Sc0000003-1564993656:40345..40382 | Branchiostoma lanceolatum | exon |
| BlTCONS00009909-exon-Sc0000003-1564993656:39387..39507 | BlTCONS00009909-exon-Sc0000003-1564993656:39387..39507 | Branchiostoma lanceolatum | exon |
| BlTCONS00009909-exon-Sc0000003-1564993656:39004..39040 | BlTCONS00009909-exon-Sc0000003-1564993656:39004..39040 | Branchiostoma lanceolatum | exon |
| BlTCONS00009909-exon-Sc0000003-1564993656:38607..38706 | BlTCONS00009909-exon-Sc0000003-1564993656:38607..38706 | Branchiostoma lanceolatum | exon |
| BlTCONS00009909-exon-Sc0000003-1564993656:38111..38287 | BlTCONS00009909-exon-Sc0000003-1564993656:38111..38287 | Branchiostoma lanceolatum | exon |
| BlTCONS00009909-exon-Sc0000003-1564993656:37654..38042 | BlTCONS00009909-exon-Sc0000003-1564993656:37654..38042 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:37654..41989 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF005043 |
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