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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:4503565..4511903+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000623 ID=BlTCONS00000623|Name=BlTCONS00000623|organism=Branchiostoma lanceolatum|type=mRNA|length=8339bp|location=Sequence derived from alignment at Sc0000000:4503565..4511903+ (Branchiostoma lanceolatum)
GTGAATTACCGCCTTGCGTGGGGCGTGGCAAAATATTGTCATTCCAGACC
CTAGACTGTCTTGTGACACGTTCGGTGTTTTTTTAGCATTTCAGGTAGGC
TCAGAGAGGTATATACTGTTATCGTTGTCTTTCCCCGTATCTTTGTGTTC
TTGGCTTCTTAGCCATGGCGTCTCAGAGAGTGTCCCTTTCTTTGTAATAC
CGTCCTCAGTGTAGCGTTAAGTATATCATAATACAGTACTCCAGGGTAAA
AGACGCCGTTACAAACACTGTTCTTAACGACAAGGTAGAAGACGCCCCGA
GAAGCACCATGGCTAGATTGGAGGCTATCTTTACTCCTACCGGTTGTTTT
TCTCCGGTTGTGTTCTCCCAAACCCGTGTATCGACTACACGTATGTTTGG
TTTTGTCTGAGAGCGTGAAGCGTGACGGAGGTAGTAGTAGCGGAAGGAGT
AGCAAGTGTAACATTCGCGAGGATTGTTTGCGTGACCAAGGAAGTTAAAA
TCAAATTGGCGAGACCCATTGAGATGTCTTCATATGATGGCCCGACCAAT
ATTCTATGCTGCTTGCAGACAGATTTTTGGTCTGCCCGGAACGTTCACCA
TTACAATACAAGCCACTAGTATGTTTGGTTTGTCTGGGTGAATGAAGCGT
GCCGGGGTACTAGTAGTACAGGAGGGGCGGAAAGAGTAATAGTCGTGCGA
CTGGTTTGCTTGACCCAGTATGTATGCATGGGCGTCAAAGAATGTCTAGA
CGTTGGAAATTCTTCCAATGATTGTAAAAGCTCACGATCCCATACTAAAT
ACTCTTGGATCAGATAGATTAGCCTTATAGAACTGTAGATGCCATACTTT
GTACCTTGTACAATTGTTGTGCAATAAAGTTATTATTATGATTAGCCGAC
CAATATACTATACTGCTTACAGAAGATTTTTTGTCTACCCGGAACGTTCC
CCACTACAAGTCACCATGCCGGCTCTCAACTCTCTCAACGTCTCCTTCGA
GAAGAACATGGACGTCTTCCAAGCTGGACAAGTCGTCAGGGGGCAGGTGG
AGGTGGATCTTAAGGAGGACATGAAGATGAGAGGTGAGTCTTAGATTGAA
GTCACCAGGTAGACTACTGTAAACGCGGTGGTTTATGTTCGCGGTTTTCG
CGGTGAACTTAAAGCCGTTTCATTGTGTGACTGTAGCACTACTATTGTTT
CAAACGCGAACTCAAAACTACCGCGAACACTCCATTTCCTCCCTACCGCA
AAATTAAATCCCCTCGAATATTTCTGCATTTACAGTCTCATGGGGTTGAA
AAAATAAGGAAGCTACATGTCATCTTCTCCATAAGAAAAGTATCGTCTGC
AGATAACGATTCCTTCATAATAAGTTTATTGCAAATGGTGCCTGGTTTCC
TTCTGGTAGCTTCATTTTGAACAGAATTGTATATTTGCAGTGTATTGTGC
ATGTTGGTCGTGACCCATTCTCTCATGCCACGGTCGTTGCTTGACATATA
CAAGCGAGGGGCCTTGTCCATTGACTTTTGTATATGTAAAGCAACGGCCC
TGGCGAATTGTAATGTGATCGTCCTTCTCACTGGTTGGTCAGCCATCACT
AGCCAATCACGTCGCCGCCTGCGGTCAAGAGGCAACTTGATTGGCTGGTA
GCTTCCCATCCAACAACAGGAGGGGGAGTATCTGATTGGCTGTCCAGCGC
TGACGTAGCGGGAAGGACAGAGCGCAGACCGTTACACCAGGGTCGTTGCT
TGACATAGAAAACTGGAAATCTTAATTGACACAACAAATGTACAGCAACT
TTCGGAAGCTCTACTACATCTATACATACAAACAATCAAGTGGATACAAA
TGAATTAACATATACGTAAATGTATATGGAAAGATATGAGTGAATCAACA
TGTTGAGGCCAATGTATCATTTACACAATTGTTTCTAATGTCTAGACATT
CTTGCTTTGATATATTAACCTATTTGTACACGGTAAGGGTTGTCTCCCCC
TAGAATGTAGTTGAATTTATCTATGGAATATACCAACGGCGGGCCTGACA
TGAGACATGATAATGGTGTTCAATTTGTTGGTCGTATCCTTGTTCAACTT
GAAAACATGTTATTCAACATTGCTATCCTTAGGCATCAACCTGACACTGA
AGGGCTCTGCAAAGGTTCATTGGACGGTCCACACCGGGAAAACAACTATC
TATTACTCCGGCAGGGAAACTTACTTCGACAACACGATGACACTCTGGGG
CTCAGGTAAGGCTAGGGTCACAATTCCAAGCCGGGGCCCGACCGGGCTGT
TTGAGAAAACAAAGAATAAAAAATGCAAATCAAGAATATACATAGCGTAT
GGTAAGGAGAAATTTCTAAATAGTTTTGTGTGTTTTGTTGTCTTTTATAT
CATAGTTTTCGTTCCCACGAGCTACCCGGCCGGGCCCAGGGTTGGAAATG
TGACCCTAGCATAAGTAAAACACGTTCTTCAAAGCCCGGAAAGTCATTTC
AGGCTTGGATGCGATCAGAGGAGCGAACTGGAACTAGGATAACGTGGGTT
CCAGGCCTTGATTGGGTAGTATTGGCGGTGGGGAGTACAGTCACCGGAAG
GCCCTGAATGTGTGACAGGAACGTTAGACAGGTTAAATCGAGGCAGACAT
GTTGTTTTCTATTCTCCAAGCAGAGGTTTCGATCGGGGGCTAGTAGTGGC
CGGGATTTTTAACGCTGCGTAAAAGACCGGCCCCTACTTGCCCACCGATC
GAAACCTCTGCTATTAAAATAGTTATTTTCTACCACCCTCTGTACATACA
TATGGTACATACTTCTTTCTCTGCTAAGAACTCAGCATTTGGGAAAGAGT
TTGGTAGTTAAACACACACCACTACCAGTGGATTAGCCCCCCGCTGTAGT
GATAAAGTTGTGTGGCCCAGGGCTACCGAAACGGAGATGGGCGCCGTCTG
GTGCGGGGAGGACTTTAACTTTAACTTTCTGTAGGTAAGAGCCAGTCTGG
AGACGACCCGGTGCTGCCGGCAGGGAAGCACAACTTCCCGTTCCAGTACC
AGCTCCCGAGCGCGGGGCTGCCCACCTCGATCGAAGGCTGGTACGGCTAC
GTGCGGTACCGGGCCAAGGCCGTCATCGACAGGCCGTGGAAGTTCGACAA
GACGGCAAAGAAGCTTTTCACCGTGCTGGACATGTACGATCTGAACGAGG
ATCCGGAAGCGACGGTAAATGAATGACTCCTGATAATGAATGAATGAATG
AATGAAAGACCTTTATTGTGCATTCATGCCCCGAGGGGCTAGGTACAGGT
CGTCTAACTAAACACATGGAATATACAAGGACATAAATACAACAATACAA
GCTGTAAACATATATAGTAGACAAACGTATTATTTAACTAAGCTAGTCCA
GTAGTGTCGACTTCTTCTCGCTTCTTTGTACATGTGTAAATGTATGAACA
GACAATATTTCTTATACAAGGATTATCCAGGCGTAATAAATATATGAATT
TGTCTGCTGCATTAAGATGTTCGAAATATGGGAATTTTTCTTCGATAAAG
TTAAAAAGTACACTACTTTCGCTATCGTATAATTTGAAATCTAGGACGAA
ATGTTGCTCATCTTCTACTCGATTTAGATTACAATGTTGACAAAGTCTAT
GTTGTAGAGGCGTGCGGTTGTGCCTTCCTGTTTCGACATGTAATATATGA
CGGCTAACCCGGAGTTTAGTAGTAGCCACTCTGTGTTTGATGTTGCTAAT
GGATAAATACACTTCTTCTTTATACAATGACTGAAACAGACGGTAAGTTC
GGAGTTTGTTGCTATAAGATTTATCCCTGTTATCGTTGTGGATTTCGGCT
GAGAATGTTTGAGTATAGATGTCTTTTAATCGTTGACTAATGGAGTTAAT
GATAAGTGACAAATTTGTTCCTTAGGATACTTGTGGGCTCCAAACAAAGG
CATAACCATATGCTTAGGTCTCAATTGGAAAAGGGGGCCCTGTCGGCCTG
AAGTTTTGCACTTTCGGGCATTATAAAGTACCCCTACGTGGTCCTGTAGG
GCACCATGTGGCTACCGGGCTATTGTGGGGTACTGCCGGGGCCCTGGACG
TTTTTAACGCGGAGTTATAATCAACGCGGGGCCCAGTAAGAAATAGGCAC
CGTGAGCTAACCATGCAATCACCGAGAGGTCTTCCCTTCTTCGTTATAAA
GAACCCCTACGTGGCCCCGTGGGGCACCATGTGGCTACCGGACTATTGTG
GGGCACGGACGGGGCCCTGGAAGTTTTTAACGCGGAGTTATAATCAACGC
GGGGCCCAGTAAGAAATAGGCACCATGAGCTAACCATGCAATCACCGAGA
GGTCTTCCCTTCTGTACCCGGCAGTCTACCAAGACAAATTTCTTCTCTTC
GCTAACACTGGCTCAATCGCTTCGCTTGCTAACTATGGTGGTTAGCAAGC
AAAAATATTGAGCCAGTGGTTACTACGGAGGCACCCAGGCTAGCTTCTAT
TAAGTTCTAACCGAAGTTCTTGCACAAAATCTCTTTCCAAGACAATTCAA
ACTGCCGAAGAGTCCAAGAAGCTTGGCGTGTGGCCCTTCGCTTCTGATCC
CATCGAGGTTCACGTTCAGACGGACCGGGGCGCGTACTGCCCGGGGGAGA
CCATCCGGCTCAGCGGGACCATCAAGAACGGGAGCGGCACCGACATCAAG
GAGACGACTGTCCAGATCCGACAGGTGTGTATTTTTCTTAACTAAAAAGC
TGCACACTTCTTTATGAAATCTATCGATCAATAGCTTTATTTACAGATCC
ACACCCGAGTACTCGCCAAGCAGAGGTCGGTGGGGGAAGATTGTGACCTT
TTTATCATATGCCTCGTTTTTCGTCCGCTATCCCCCACTGAAAGTATACC
CGAGAGCTAATGTCAGTTGAAACAAGAAGCAAAGATTATCATATACCTCC
GTGAAATGTTGAGTGGATTTCTTGTTATATTCATTATTGTGAACTTTGCT
CTGATTCTGTCTATGCATTTTCCTATTGGCCTCCATTATCACAGGGAAAT
AAATACTCTCCAAGCAGAGGTTGGTAGGGAAGATTGTGACCTTTTTATCA
TATGCCTCGTTTTTTGTCCGCTCTCCCCACCAACCTCTGCTTGCAGAGTA
GAAATAAAGAGAGGGATCCAGATAACCTTTGGTAACGCATTCTGGGACAT
TTCTGGGACCTTTGACCTAATTTCCTGTCAGTGTCCCCGACGTGCCAAGC
ATGTGAAAATGAGTACGGAACATACACACACAAATATTGCGCGGAGGTAT
GAGATCTTAGATTTCCTGTTTGAAAAATATTGTTTTCTATAACCACAGAG
AGTGACCTTCATCGCTACCAGCCCACACAAAAGTAAAAGGAACAACCGGT
CTACGCTGAGTGAGATCAAAGCGTACGGCTGCAAGAGTAAGGACACGGCC
GACCTGAGCGGCATCTCCATTCAAGTCCCGTCCATCCCGCCTTCGTCTCA
GCGCTACTGCAACGTCATCGACGTGGTCTACAAGCTGAAGGTATACCGTA
GATTCAGTTAGTTTGTTTAATTTCGCAACAGAAAGGTGAAAAGGTTTTTT
TCGGTGTTTCAAGTTTGTGGGTTGAAACGCATATTCGCAGTGTCATAAAT
TTAGGTTTCTGTTTAGGTTAATGTCGCGATGGACAGGTCATCACGAAAAT
AAGGTTTCAAAAATGCAGTAGTTTCACTAAGACGCTATCGATCTATCTAT
CTATCTTTCTATATTATGAATGAAAATATTAATGTCTGAAATGATGTTCA
CTTTTGTTACGAACTTGTCTGGCACTGCTACCATTTCATCAGTCTGATAC
ACACAAATTACTTTTGCAAAAAAAGAAAATTCGTTCTCGTGTTTGTCTGT
TCTTTGAAAACGTTCTCCTTTTTGTCCGCCCAGTTCATCGTAAACATCCC
CGGACCCCAGACTTTTGTAACCAACTTGTCTGCCAGTTCTGCTATCATTT
TATCAACACATAAATTGCTTTTAAAATAAAGGAACCTCGTTCTCGTGTCT
GCCTAGTGGTGGCGTTTGTAGTCCAGTGGTTAGCGATTTTGCCTCTGGAA
CTAGAAGCCCCGGGTTCGATCCCGGCTGTGTCGCTCACCCGACATGCACG
CTACTGGAAAGGGTCGCATTCCTTAGGACGGGACGTTAAGCCGTGGTCCA
CTGTTCATTGTGCTTGTCGAAAAGAGCTAGGGGAATTTCCCCGGTGCAAT
GAACCTGTAAATACTGTACATAGCATCTGTCTTCTCCGTCACGACCAGTG
GAAGATTAGCTCATCTGTTCATTTGAGCTAAACTGGTTCGAGACCACTTT
CCTTTGCTTTCCTTTTCTTAGCTGTTTTTTTAAACGTAACGTTCGTCTCC
TTTTTCCGTCCGCCCAGTTCATCGTGAACATCCCCGGACCCCACACGGAC
CTGGAGGTGGACCTTCCCATCACCATCGGCTCCATCCCGCTCAGGAGTTA
TTACCCACAAGCCCCTTCGTTCCCTCTACATCCGGTGGAGAATCCGCCAC
CACCTTCCCAGGATTCCTTGTACCCGGATCTCGGCTTCGCTCAGTGGACG
TACCCAGCAGCCACCGACCCGAGTGCACCTCGTAAGTAATATATGGTCTT
CTGTAATGTCTGTTGTTGTTGTTGTTGTTGTCACGGTCCATTTTTCCGCT
AGACGTGGTCACACGTTACAGTCTTTTGACTGGTGCTTCTTGGGTATCTC
TCTGGTGCTTCACCTCAGGTGCTTTGCTCATGCGTGTTTCGAATGCGGTT
ACTAGATAATGTCTCCATGTGGGAACCTTGGCGGTTCAACTTTTGCCACT
TCCATATTTACAGCTTTGCTTTGTTTGTATTGTATGCCAGGTAAACCGCC
TCATGAAGGACACTTTGGGGATGAGTATGCATGGTGATCTTGCCTGACAA
CAGTTTTATCCTATACCTCTATTTTGTACTATGTTTTAATAGTTGTTGCC
ATACATTGCACCATGTACAATTGTCGTGCAATAAAGTTCCTCTTCTTGTC
TTGTCCACAGCTCCCCCGTACTACGCCGTGTCCAGTACCGGTCCCGTGAA
GATCAAAGACGACGAGGAGAAAGACGACAAGTACGACATGGGGCAGAAGG
AGTTCGCCCCTAAATACACGTTCTACGACTGGAGCAAGCACCCTTCAGTT
TAACCTCCACCAGGCCTTCCTACGGGGGTAAAGGGTAGTCTCTACCAGAC
TAACTACCCCGGCTATAGGGATCATATTTGCCAGCGGAAGGCTCCGTTGC
GGGCGAAATGTGATCTTTACCGTGGACTGACTCTACTCAGTCTTCTGGCT
AATCATTCCTTTTTCTAAATTCTATGATCTATACGCCCGTAGGAGGGCCT
GGTGAAGGCTAGGTTTCTTGAATTTGGCAAGAAAGGAATAATTGGCAAGG
AAAGTCAGAGTACCTGCAGGTGAAACCTTATGGTGGCCAGACTTCCCTGG
AATATTCTCCCAGTAGCCGGCGGGGTTAGTCTGGTATGGACTTACTTAGG
TCTAGTTTTGACCTTCTACCGTCGATAATGCGAACCCGTGGTTTCTTTCG
GTTGTGTCTACAGCGCAAATGCGTCACTACTCTATTCAACCGATTCAACG
GAAGTATTAGCATGGTGAATTGATAATTTAAGCTTCAAATCAGGAGGTAC
ACAAAATGTTGTTGTGTTATTATGGCAGTGTGTATTTATGGCGCAAATAC
GTCACTACCCTATTCAACGGAAGTATATTAGCATAGTATTTTGATAGTTT
TAGCTTAAAATTAGGAGGCACACAAAAATGATGTTGTGGTCTTATGACTT
ATGGAAGTTTTTATAGCGCAAACACGGCTATTCTGTTCAACGGAAGTGTT
AGCATAGTATTTTAATAGTTTTAGCTTCCAATTAGGATGTACACAAATGT
TGTTGTGTTCATATCTTAATGGCAATCTTTCTTCGTTACGGTATCATGTT
TCTGTCTAATGGTGAATTCTTATTAGTTTGCAAAGATATTTTGAACTTTT
CTGGTGAAAAAGATGTATAAGTGAATACATCTACTATACTACGGCGACCC
TACAATGGACCTGAACTGTATTCTGGGTTGAAGGAAATGTATATACTGTA
TAGCTATCAACTTCAAACATTACTAATTTTAACGGCATATAGGTGCTTTG
TAAAGGTGCGCTAATAGAATCAATGCTACTTTGTGTTGAAAAACATAGCT
TCTTGGGTCAAGATAATTAACTAGAAACTTTTCATACAACCATGTATTTT
GCGCCAAGGTTAAAAAGTCAGTAATAAACAGTTTCGTAC Coding sequence (CDS) from alignment at Sc0000000:4503565..4511903+ >BlTCONS00000623 ID=BlTCONS00000623|Name=BlTCONS00000623|organism=Branchiostoma lanceolatum|type=CDS|length=1203bp|location=Sequence derived from alignment at Sc0000000:4503565..4511903+ (Branchiostoma lanceolatum)
ATGCCGGCTCTCAACTCTCTCAACGTCTCCTTCGAGAAGAACATGGACGT
CTTCCAAGCTGGACAAGTCGTCAGGGGGCAGGTGGAGGTGGATCTTAAGG
AGGACATGAAGATGAGAGGCATCAACCTGACACTGAAGGGCTCTGCAAAG
GTTCATTGGACGGTCCACACCGGGAAAACAACTATCTATTACTCCGGCAG
GGAAACTTACTTCGACAACACGATGACACTCTGGGGCTCAGGTAAGAGCC
AGTCTGGAGACGACCCGGTGCTGCCGGCAGGGAAGCACAACTTCCCGTTC
CAGTACCAGCTCCCGAGCGCGGGGCTGCCCACCTCGATCGAAGGCTGGTA
CGGCTACGTGCGGTACCGGGCCAAGGCCGTCATCGACAGGCCGTGGAAGT
TCGACAAGACGGCAAAGAAGCTTTTCACCGTGCTGGACATGTACGATCTG
AACGAGGATCCGGAAGCGACGACAATTCAAACTGCCGAAGAGTCCAAGAA
GCTTGGCGTGTGGCCCTTCGCTTCTGATCCCATCGAGGTTCACGTTCAGA
CGGACCGGGGCGCGTACTGCCCGGGGGAGACCATCCGGCTCAGCGGGACC
ATCAAGAACGGGAGCGGCACCGACATCAAGGAGACGACTGTCCAGATCCG
ACAGAGAGTGACCTTCATCGCTACCAGCCCACACAAAAGTAAAAGGAACA
ACCGGTCTACGCTGAGTGAGATCAAAGCGTACGGCTGCAAGAGTAAGGAC
ACGGCCGACCTGAGCGGCATCTCCATTCAAGTCCCGTCCATCCCGCCTTC
GTCTCAGCGCTACTGCAACGTCATCGACGTGGTCTACAAGCTGAAGTTCA
TCGTGAACATCCCCGGACCCCACACGGACCTGGAGGTGGACCTTCCCATC
ACCATCGGCTCCATCCCGCTCAGGAGTTATTACCCACAAGCCCCTTCGTT
CCCTCTACATCCGGTGGAGAATCCGCCACCACCTTCCCAGGATTCCTTGT
ACCCGGATCTCGGCTTCGCTCAGTGGACGTACCCAGCAGCCACCGACCCG
AGTGCACCTCCTCCCCCGTACTACGCCGTGTCCAGTACCGGTCCCGTGAA
GATCAAAGACGACGAGGAGAAAGACGACAAGTACGACATGGGGCAGAAGG
AGTTCGCCCCTAAATACACGTTCTACGACTGGAGCAAGCACCCTTCAGTT
TAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000623-exon-Sc0000000-1564993656:4503565..4503658 | BlTCONS00000623-exon-Sc0000000-1564993656:4503565..4503658 | Branchiostoma lanceolatum | exon |
| BlTCONS00000623-exon-Sc0000000-1564993656:4504490..4504647 | BlTCONS00000623-exon-Sc0000000-1564993656:4504490..4504647 | Branchiostoma lanceolatum | exon |
| BlTCONS00000623-exon-Sc0000000-1564993656:4505697..4505819 | BlTCONS00000623-exon-Sc0000000-1564993656:4505697..4505819 | Branchiostoma lanceolatum | exon |
| BlTCONS00000623-exon-Sc0000000-1564993656:4506549..4506778 | BlTCONS00000623-exon-Sc0000000-1564993656:4506549..4506778 | Branchiostoma lanceolatum | exon |
| BlTCONS00000623-exon-Sc0000000-1564993656:4508106..4508288 | BlTCONS00000623-exon-Sc0000000-1564993656:4508106..4508288 | Branchiostoma lanceolatum | exon |
| BlTCONS00000623-exon-Sc0000000-1564993656:4508913..4509104 | BlTCONS00000623-exon-Sc0000000-1564993656:4508913..4509104 | Branchiostoma lanceolatum | exon |
| BlTCONS00000623-exon-Sc0000000-1564993656:4509982..4510195 | BlTCONS00000623-exon-Sc0000000-1564993656:4509982..4510195 | Branchiostoma lanceolatum | exon |
| BlTCONS00000623-exon-Sc0000000-1564993656:4510625..4511903 | BlTCONS00000623-exon-Sc0000000-1564993656:4510625..4511903 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:4503565..4511903 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000335 |
|
