|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:4503514..4511903+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000621 ID=BlTCONS00000621|Name=BlTCONS00000621|organism=Branchiostoma lanceolatum|type=mRNA|length=8390bp|location=Sequence derived from alignment at Sc0000000:4503514..4511903+ (Branchiostoma lanceolatum)
CTGACCCCTGACCTAGTGACATGAAAAGCTTTTGTGTCTGTCGTTCGACA
GGTGAATTACCGCCTTGCGTGGGGCGTGGCAAAATATTGTCATTCCAGAC
CCTAGACTGTCTTGTGACACGTTCGGTGTTTTTTTAGCATTTCAGGTAGG
CTCAGAGAGGTATATACTGTTATCGTTGTCTTTCCCCGTATCTTTGTGTT
CTTGGCTTCTTAGCCATGGCGTCTCAGAGAGTGTCCCTTTCTTTGTAATA
CCGTCCTCAGTGTAGCGTTAAGTATATCATAATACAGTACTCCAGGGTAA
AAGACGCCGTTACAAACACTGTTCTTAACGACAAGGTAGAAGACGCCCCG
AGAAGCACCATGGCTAGATTGGAGGCTATCTTTACTCCTACCGGTTGTTT
TTCTCCGGTTGTGTTCTCCCAAACCCGTGTATCGACTACACGTATGTTTG
GTTTTGTCTGAGAGCGTGAAGCGTGACGGAGGTAGTAGTAGCGGAAGGAG
TAGCAAGTGTAACATTCGCGAGGATTGTTTGCGTGACCAAGGAAGTTAAA
ATCAAATTGGCGAGACCCATTGAGATGTCTTCATATGATGGCCCGACCAA
TATTCTATGCTGCTTGCAGACAGATTTTTGGTCTGCCCGGAACGTTCACC
ATTACAATACAAGCCACTAGTATGTTTGGTTTGTCTGGGTGAATGAAGCG
TGCCGGGGTACTAGTAGTACAGGAGGGGCGGAAAGAGTAATAGTCGTGCG
ACTGGTTTGCTTGACCCAGTATGTATGCATGGGCGTCAAAGAATGTCTAG
ACGTTGGAAATTCTTCCAATGATTGTAAAAGCTCACGATCCCATACTAAA
TACTCTTGGATCAGATAGATTAGCCTTATAGAACTGTAGATGCCATACTT
TGTACCTTGTACAATTGTTGTGCAATAAAGTTATTATTATGATTAGCCGA
CCAATATACTATACTGCTTACAGAAGATTTTTTGTCTACCCGGAACGTTC
CCCACTACAAGTCACCATGCCGGCTCTCAACTCTCTCAACGTCTCCTTCG
AGAAGAACATGGACGTCTTCCAAGCTGGACAAGTCGTCAGGGGGCAGGTG
GAGGTGGATCTTAAGGAGGACATGAAGATGAGAGGTGAGTCTTAGATTGA
AGTCACCAGGTAGACTACTGTAAACGCGGTGGTTTATGTTCGCGGTTTTC
GCGGTGAACTTAAAGCCGTTTCATTGTGTGACTGTAGCACTACTATTGTT
TCAAACGCGAACTCAAAACTACCGCGAACACTCCATTTCCTCCCTACCGC
AAAATTAAATCCCCTCGAATATTTCTGCATTTACAGTCTCATGGGGTTGA
AAAAATAAGGAAGCTACATGTCATCTTCTCCATAAGAAAAGTATCGTCTG
CAGATAACGATTCCTTCATAATAAGTTTATTGCAAATGGTGCCTGGTTTC
CTTCTGGTAGCTTCATTTTGAACAGAATTGTATATTTGCAGTGTATTGTG
CATGTTGGTCGTGACCCATTCTCTCATGCCACGGTCGTTGCTTGACATAT
ACAAGCGAGGGGCCTTGTCCATTGACTTTTGTATATGTAAAGCAACGGCC
CTGGCGAATTGTAATGTGATCGTCCTTCTCACTGGTTGGTCAGCCATCAC
TAGCCAATCACGTCGCCGCCTGCGGTCAAGAGGCAACTTGATTGGCTGGT
AGCTTCCCATCCAACAACAGGAGGGGGAGTATCTGATTGGCTGTCCAGCG
CTGACGTAGCGGGAAGGACAGAGCGCAGACCGTTACACCAGGGTCGTTGC
TTGACATAGAAAACTGGAAATCTTAATTGACACAACAAATGTACAGCAAC
TTTCGGAAGCTCTACTACATCTATACATACAAACAATCAAGTGGATACAA
ATGAATTAACATATACGTAAATGTATATGGAAAGATATGAGTGAATCAAC
ATGTTGAGGCCAATGTATCATTTACACAATTGTTTCTAATGTCTAGACAT
TCTTGCTTTGATATATTAACCTATTTGTACACGGTAAGGGTTGTCTCCCC
CTAGAATGTAGTTGAATTTATCTATGGAATATACCAACGGCGGGCCTGAC
ATGAGACATGATAATGGTGTTCAATTTGTTGGTCGTATCCTTGTTCAACT
TGAAAACATGTTATTCAACATTGCTATCCTTAGGCATCAACCTGACACTG
AAGGGCTCTGCAAAGGTTCATTGGACGGTCCACACCGGGAAAACAACTAT
CTATTACTCCGGCAGGGAAACTTACTTCGACAACACGATGACACTCTGGG
GCTCAGGTAAGGCTAGGGTCACAATTCCAAGCCGGGGCCCGACCGGGCTG
TTTGAGAAAACAAAGAATAAAAAATGCAAATCAAGAATATACATAGCGTA
TGGTAAGGAGAAATTTCTAAATAGTTTTGTGTGTTTTGTTGTCTTTTATA
TCATAGTTTTCGTTCCCACGAGCTACCCGGCCGGGCCCAGGGTTGGAAAT
GTGACCCTAGCATAAGTAAAACACGTTCTTCAAAGCCCGGAAAGTCATTT
CAGGCTTGGATGCGATCAGAGGAGCGAACTGGAACTAGGATAACGTGGGT
TCCAGGCCTTGATTGGGTAGTATTGGCGGTGGGGAGTACAGTCACCGGAA
GGCCCTGAATGTGTGACAGGAACGTTAGACAGGTTAAATCGAGGCAGACA
TGTTGTTTTCTATTCTCCAAGCAGAGGTTTCGATCGGGGGCTAGTAGTGG
CCGGGATTTTTAACGCTGCGTAAAAGACCGGCCCCTACTTGCCCACCGAT
CGAAACCTCTGCTATTAAAATAGTTATTTTCTACCACCCTCTGTACATAC
ATATGGTACATACTTCTTTCTCTGCTAAGAACTCAGCATTTGGGAAAGAG
TTTGGTAGTTAAACACACACCACTACCAGTGGATTAGCCCCCCGCTGTAG
TGATAAAGTTGTGTGGCCCAGGGCTACCGAAACGGAGATGGGCGCCGTCT
GGTGCGGGGAGGACTTTAACTTTAACTTTCTGTAGGTAAGAGCCAGTCTG
GAGACGACCCGGTGCTGCCGGCAGGGAAGCACAACTTCCCGTTCCAGTAC
CAGCTCCCGAGCGCGGGGCTGCCCACCTCGATCGAAGGCTGGTACGGCTA
CGTGCGGTACCGGGCCAAGGCCGTCATCGACAGGCCGTGGAAGTTCGACA
AGACGGCAAAGAAGCTTTTCACCGTGCTGGACATGTACGATCTGAACGAG
GATCCGGAAGCGACGGTAAATGAATGACTCCTGATAATGAATGAATGAAT
GAATGAAAGACCTTTATTGTGCATTCATGCCCCGAGGGGCTAGGTACAGG
TCGTCTAACTAAACACATGGAATATACAAGGACATAAATACAACAATACA
AGCTGTAAACATATATAGTAGACAAACGTATTATTTAACTAAGCTAGTCC
AGTAGTGTCGACTTCTTCTCGCTTCTTTGTACATGTGTAAATGTATGAAC
AGACAATATTTCTTATACAAGGATTATCCAGGCGTAATAAATATATGAAT
TTGTCTGCTGCATTAAGATGTTCGAAATATGGGAATTTTTCTTCGATAAA
GTTAAAAAGTACACTACTTTCGCTATCGTATAATTTGAAATCTAGGACGA
AATGTTGCTCATCTTCTACTCGATTTAGATTACAATGTTGACAAAGTCTA
TGTTGTAGAGGCGTGCGGTTGTGCCTTCCTGTTTCGACATGTAATATATG
ACGGCTAACCCGGAGTTTAGTAGTAGCCACTCTGTGTTTGATGTTGCTAA
TGGATAAATACACTTCTTCTTTATACAATGACTGAAACAGACGGTAAGTT
CGGAGTTTGTTGCTATAAGATTTATCCCTGTTATCGTTGTGGATTTCGGC
TGAGAATGTTTGAGTATAGATGTCTTTTAATCGTTGACTAATGGAGTTAA
TGATAAGTGACAAATTTGTTCCTTAGGATACTTGTGGGCTCCAAACAAAG
GCATAACCATATGCTTAGGTCTCAATTGGAAAAGGGGGCCCTGTCGGCCT
GAAGTTTTGCACTTTCGGGCATTATAAAGTACCCCTACGTGGTCCTGTAG
GGCACCATGTGGCTACCGGGCTATTGTGGGGTACTGCCGGGGCCCTGGAC
GTTTTTAACGCGGAGTTATAATCAACGCGGGGCCCAGTAAGAAATAGGCA
CCGTGAGCTAACCATGCAATCACCGAGAGGTCTTCCCTTCTTCGTTATAA
AGAACCCCTACGTGGCCCCGTGGGGCACCATGTGGCTACCGGACTATTGT
GGGGCACGGACGGGGCCCTGGAAGTTTTTAACGCGGAGTTATAATCAACG
CGGGGCCCAGTAAGAAATAGGCACCATGAGCTAACCATGCAATCACCGAG
AGGTCTTCCCTTCTGTACCCGGCAGTCTACCAAGACAAATTTCTTCTCTT
CGCTAACACTGGCTCAATCGCTTCGCTTGCTAACTATGGTGGTTAGCAAG
CAAAAATATTGAGCCAGTGGTTACTACGGAGGCACCCAGGCTAGCTTCTA
TTAAGTTCTAACCGAAGTTCTTGCACAAAATCTCTTTCCAAGACAATTCA
AACTGCCGAAGAGTCCAAGAAGCTTGGCGTGTGGCCCTTCGCTTCTGATC
CCATCGAGGTTCACGTTCAGACGGACCGGGGCGCGTACTGCCCGGGGGAG
ACCATCCGGCTCAGCGGGACCATCAAGAACGGGAGCGGCACCGACATCAA
GGAGACGACTGTCCAGATCCGACAGGTGTGTATTTTTCTTAACTAAAAAG
CTGCACACTTCTTTATGAAATCTATCGATCAATAGCTTTATTTACAGATC
CACACCCGAGTACTCGCCAAGCAGAGGTCGGTGGGGGAAGATTGTGACCT
TTTTATCATATGCCTCGTTTTTCGTCCGCTATCCCCCACTGAAAGTATAC
CCGAGAGCTAATGTCAGTTGAAACAAGAAGCAAAGATTATCATATACCTC
CGTGAAATGTTGAGTGGATTTCTTGTTATATTCATTATTGTGAACTTTGC
TCTGATTCTGTCTATGCATTTTCCTATTGGCCTCCATTATCACAGGGAAA
TAAATACTCTCCAAGCAGAGGTTGGTAGGGAAGATTGTGACCTTTTTATC
ATATGCCTCGTTTTTTGTCCGCTCTCCCCACCAACCTCTGCTTGCAGAGT
AGAAATAAAGAGAGGGATCCAGATAACCTTTGGTAACGCATTCTGGGACA
TTTCTGGGACCTTTGACCTAATTTCCTGTCAGTGTCCCCGACGTGCCAAG
CATGTGAAAATGAGTACGGAACATACACACACAAATATTGCGCGGAGGTA
TGAGATCTTAGATTTCCTGTTTGAAAAATATTGTTTTCTATAACCACAGA
GAGTGACCTTCATCGCTACCAGCCCACACAAAAGTAAAAGGAACAACCGG
TCTACGCTGAGTGAGATCAAAGCGTACGGCTGCAAGAGTAAGGACACGGC
CGACCTGAGCGGCATCTCCATTCAAGTCCCGTCCATCCCGCCTTCGTCTC
AGCGCTACTGCAACGTCATCGACGTGGTCTACAAGCTGAAGGTATACCGT
AGATTCAGTTAGTTTGTTTAATTTCGCAACAGAAAGGTGAAAAGGTTTTT
TTCGGTGTTTCAAGTTTGTGGGTTGAAACGCATATTCGCAGTGTCATAAA
TTTAGGTTTCTGTTTAGGTTAATGTCGCGATGGACAGGTCATCACGAAAA
TAAGGTTTCAAAAATGCAGTAGTTTCACTAAGACGCTATCGATCTATCTA
TCTATCTTTCTATATTATGAATGAAAATATTAATGTCTGAAATGATGTTC
ACTTTTGTTACGAACTTGTCTGGCACTGCTACCATTTCATCAGTCTGATA
CACACAAATTACTTTTGCAAAAAAAGAAAATTCGTTCTCGTGTTTGTCTG
TTCTTTGAAAACGTTCTCCTTTTTGTCCGCCCAGTTCATCGTAAACATCC
CCGGACCCCAGACTTTTGTAACCAACTTGTCTGCCAGTTCTGCTATCATT
TTATCAACACATAAATTGCTTTTAAAATAAAGGAACCTCGTTCTCGTGTC
TGCCTAGTGGTGGCGTTTGTAGTCCAGTGGTTAGCGATTTTGCCTCTGGA
ACTAGAAGCCCCGGGTTCGATCCCGGCTGTGTCGCTCACCCGACATGCAC
GCTACTGGAAAGGGTCGCATTCCTTAGGACGGGACGTTAAGCCGTGGTCC
ACTGTTCATTGTGCTTGTCGAAAAGAGCTAGGGGAATTTCCCCGGTGCAA
TGAACCTGTAAATACTGTACATAGCATCTGTCTTCTCCGTCACGACCAGT
GGAAGATTAGCTCATCTGTTCATTTGAGCTAAACTGGTTCGAGACCACTT
TCCTTTGCTTTCCTTTTCTTAGCTGTTTTTTTAAACGTAACGTTCGTCTC
CTTTTTCCGTCCGCCCAGTTCATCGTGAACATCCCCGGACCCCACACGGA
CCTGGAGGTGGACCTTCCCATCACCATCGGCTCCATCCCGCTCAGGAGTT
ATTACCCACAAGCCCCTTCGTTCCCTCTACATCCGGTGGAGAATCCGCCA
CCACCTTCCCAGGATTCCTTGTACCCGGATCTCGGCTTCGCTCAGTGGAC
GTACCCAGCAGCCACCGACCCGAGTGCACCTCGTAAGTAATATATGGTCT
TCTGTAATGTCTGTTGTTGTTGTTGTTGTTGTCACGGTCCATTTTTCCGC
TAGACGTGGTCACACGTTACAGTCTTTTGACTGGTGCTTCTTGGGTATCT
CTCTGGTGCTTCACCTCAGGTGCTTTGCTCATGCGTGTTTCGAATGCGGT
TACTAGATAATGTCTCCATGTGGGAACCTTGGCGGTTCAACTTTTGCCAC
TTCCATATTTACAGCTTTGCTTTGTTTGTATTGTATGCCAGGTAAACCGC
CTCATGAAGGACACTTTGGGGATGAGTATGCATGGTGATCTTGCCTGACA
ACAGTTTTATCCTATACCTCTATTTTGTACTATGTTTTAATAGTTGTTGC
CATACATTGCACCATGTACAATTGTCGTGCAATAAAGTTCCTCTTCTTGT
CTTGTCCACAGCTCCCCCGTACTACGCCGTGTCCAGTACCGGTCCCGTGA
AGATCAAAGACGACGAGGAGAAAGACGACAAGTACGACATGGGGCAGAAG
GAGTTCGCCCCTAAATACACGTTCTACGACTGGAGCAAGCACCCTTCAGT
TTAACCTCCACCAGGCCTTCCTACGGGGGTAAAGGGTAGTCTCTACCAGA
CTAACTACCCCGGCTATAGGGATCATATTTGCCAGCGGAAGGCTCCGTTG
CGGGCGAAATGTGATCTTTACCGTGGACTGACTCTACTCAGTCTTCTGGC
TAATCATTCCTTTTTCTAAATTCTATGATCTATACGCCCGTAGGAGGGCC
TGGTGAAGGCTAGGTTTCTTGAATTTGGCAAGAAAGGAATAATTGGCAAG
GAAAGTCAGAGTACCTGCAGGTGAAACCTTATGGTGGCCAGACTTCCCTG
GAATATTCTCCCAGTAGCCGGCGGGGTTAGTCTGGTATGGACTTACTTAG
GTCTAGTTTTGACCTTCTACCGTCGATAATGCGAACCCGTGGTTTCTTTC
GGTTGTGTCTACAGCGCAAATGCGTCACTACTCTATTCAACCGATTCAAC
GGAAGTATTAGCATGGTGAATTGATAATTTAAGCTTCAAATCAGGAGGTA
CACAAAATGTTGTTGTGTTATTATGGCAGTGTGTATTTATGGCGCAAATA
CGTCACTACCCTATTCAACGGAAGTATATTAGCATAGTATTTTGATAGTT
TTAGCTTAAAATTAGGAGGCACACAAAAATGATGTTGTGGTCTTATGACT
TATGGAAGTTTTTATAGCGCAAACACGGCTATTCTGTTCAACGGAAGTGT
TAGCATAGTATTTTAATAGTTTTAGCTTCCAATTAGGATGTACACAAATG
TTGTTGTGTTCATATCTTAATGGCAATCTTTCTTCGTTACGGTATCATGT
TTCTGTCTAATGGTGAATTCTTATTAGTTTGCAAAGATATTTTGAACTTT
TCTGGTGAAAAAGATGTATAAGTGAATACATCTACTATACTACGGCGACC
CTACAATGGACCTGAACTGTATTCTGGGTTGAAGGAAATGTATATACTGT
ATAGCTATCAACTTCAAACATTACTAATTTTAACGGCATATAGGTGCTTT
GTAAAGGTGCGCTAATAGAATCAATGCTACTTTGTGTTGAAAAACATAGC
TTCTTGGGTCAAGATAATTAACTAGAAACTTTTCATACAACCATGTATTT
TGCGCCAAGGTTAAAAAGTCAGTAATAAACAGTTTCGTAC Coding sequence (CDS) from alignment at Sc0000000:4503514..4511903+ >BlTCONS00000621 ID=BlTCONS00000621|Name=BlTCONS00000621|organism=Branchiostoma lanceolatum|type=CDS|length=1203bp|location=Sequence derived from alignment at Sc0000000:4503514..4511903+ (Branchiostoma lanceolatum)
ATGCCGGCTCTCAACTCTCTCAACGTCTCCTTCGAGAAGAACATGGACGT
CTTCCAAGCTGGACAAGTCGTCAGGGGGCAGGTGGAGGTGGATCTTAAGG
AGGACATGAAGATGAGAGGCATCAACCTGACACTGAAGGGCTCTGCAAAG
GTTCATTGGACGGTCCACACCGGGAAAACAACTATCTATTACTCCGGCAG
GGAAACTTACTTCGACAACACGATGACACTCTGGGGCTCAGGTAAGAGCC
AGTCTGGAGACGACCCGGTGCTGCCGGCAGGGAAGCACAACTTCCCGTTC
CAGTACCAGCTCCCGAGCGCGGGGCTGCCCACCTCGATCGAAGGCTGGTA
CGGCTACGTGCGGTACCGGGCCAAGGCCGTCATCGACAGGCCGTGGAAGT
TCGACAAGACGGCAAAGAAGCTTTTCACCGTGCTGGACATGTACGATCTG
AACGAGGATCCGGAAGCGACGACAATTCAAACTGCCGAAGAGTCCAAGAA
GCTTGGCGTGTGGCCCTTCGCTTCTGATCCCATCGAGGTTCACGTTCAGA
CGGACCGGGGCGCGTACTGCCCGGGGGAGACCATCCGGCTCAGCGGGACC
ATCAAGAACGGGAGCGGCACCGACATCAAGGAGACGACTGTCCAGATCCG
ACAGAGAGTGACCTTCATCGCTACCAGCCCACACAAAAGTAAAAGGAACA
ACCGGTCTACGCTGAGTGAGATCAAAGCGTACGGCTGCAAGAGTAAGGAC
ACGGCCGACCTGAGCGGCATCTCCATTCAAGTCCCGTCCATCCCGCCTTC
GTCTCAGCGCTACTGCAACGTCATCGACGTGGTCTACAAGCTGAAGTTCA
TCGTGAACATCCCCGGACCCCACACGGACCTGGAGGTGGACCTTCCCATC
ACCATCGGCTCCATCCCGCTCAGGAGTTATTACCCACAAGCCCCTTCGTT
CCCTCTACATCCGGTGGAGAATCCGCCACCACCTTCCCAGGATTCCTTGT
ACCCGGATCTCGGCTTCGCTCAGTGGACGTACCCAGCAGCCACCGACCCG
AGTGCACCTCCTCCCCCGTACTACGCCGTGTCCAGTACCGGTCCCGTGAA
GATCAAAGACGACGAGGAGAAAGACGACAAGTACGACATGGGGCAGAAGG
AGTTCGCCCCTAAATACACGTTCTACGACTGGAGCAAGCACCCTTCAGTT
TAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000621-exon-Sc0000000-1564993656:4503514..4503658 | BlTCONS00000621-exon-Sc0000000-1564993656:4503514..4503658 | Branchiostoma lanceolatum | exon |
| BlTCONS00000621-exon-Sc0000000-1564993656:4504487..4504647 | BlTCONS00000621-exon-Sc0000000-1564993656:4504487..4504647 | Branchiostoma lanceolatum | exon |
| BlTCONS00000621-exon-Sc0000000-1564993656:4505697..4505819 | BlTCONS00000621-exon-Sc0000000-1564993656:4505697..4505819 | Branchiostoma lanceolatum | exon |
| BlTCONS00000621-exon-Sc0000000-1564993656:4506549..4506778 | BlTCONS00000621-exon-Sc0000000-1564993656:4506549..4506778 | Branchiostoma lanceolatum | exon |
| BlTCONS00000621-exon-Sc0000000-1564993656:4508106..4508288 | BlTCONS00000621-exon-Sc0000000-1564993656:4508106..4508288 | Branchiostoma lanceolatum | exon |
| BlTCONS00000621-exon-Sc0000000-1564993656:4508913..4509104 | BlTCONS00000621-exon-Sc0000000-1564993656:4508913..4509104 | Branchiostoma lanceolatum | exon |
| BlTCONS00000621-exon-Sc0000000-1564993656:4509982..4510195 | BlTCONS00000621-exon-Sc0000000-1564993656:4509982..4510195 | Branchiostoma lanceolatum | exon |
| BlTCONS00000621-exon-Sc0000000-1564993656:4510625..4511903 | BlTCONS00000621-exon-Sc0000000-1564993656:4510625..4511903 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:4503514..4511903 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000335 |
|
