BlTCONS00000612 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000612
Unique NameBlTCONS00000612
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:4459354..4461137+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000612 ID=BlTCONS00000612|Name=BlTCONS00000612|organism=Branchiostoma lanceolatum|type=mRNA|length=1784bp|location=Sequence derived from alignment at Sc0000000:4459354..4461137+ (Branchiostoma lanceolatum)
NACGAAAACAATGTCCTGCATGTAACGAAACTCCCCTCCTGGTTCCCATG ACCCACAAACACGGAAGAGATCGATCTAGGTACAGTCCAAAATGGCAGTC TCGCCGAGAGGACACCGCACACACGTCACTCTGTCCTGCAGCATTTGTTT CGAGGAGTTTCCCGACGCTAAGCTTCTGCCGTGCTGTCACAGCTTCTGCT GGCGGTGCCTGATCAACCACGAGGCCGAGAGAGCGGACTTCCCTTGCCCC GTCTGCGGGAGGACGGTCCACGTTCCCCCCGAAGGAATCCGAGGTCTACC CGAGCACATCCCCGCCGAGGACCTACTTACCAGACTCGAGCCTGGTGAGA ACAAACATCCGGGAATCGAACCCGAGAATGGCGATCAGTTTTGCCAGCGG TGCAGGGTGCCTGTGACAAGCGAACGAGTTCGCAGTCGCAATCACAGCGG TCACAAGATCACCCCATACCAACACCCTCCCCCCATTCCCGAAGAAGTTC GTTCCCAAGCCCGACCGGTCGTCGAAAAGTGTTTGGACGGCATTCTTGGT CTACACGACCGTCAGAAAAACATCGACGCTTCTCTGCGAGTTCTGCAGAA AAACAAGCTCAAGATTGCAGACGAGATTCGGGGGGAAACTCAAATTTGGA TCGCCGCCATCTTGGCTCGACAGGACCAACTCCTTCGTGTCCTTGAAGAC CGAACCGAAGAACAAAGGTCGGATGTTGTCGACGGAAGGCGGAAAGTCCA AGCCAAGATAGCGGAAATGTCGACGCTTTGGGGACAGATGGATGACAACT TGTCAACCGGAACATTTTCGGCCGAATATTACGATCATTCGGTTAATCAG ATATGTGGGCCAGAAGATGGTGCACTTATTGAGGACACTGGGACAGAAAG TCAGCCAAACGTTGTCTTTATCCCCAAACCACTAACTAATGACGTAGTAA TAGTTGGGGACCTTGCTTCAAGTATCCATTGACTTAGTAACTTTTATAGA GTTACAAAGTTCGATGGTGGCTTTGCTTTAGCCTCTACCAGGCTCCACGA ATCGCTGGAAAAATAGTAGAAATTGGCCAAGTAGACGGATTATGCTTCAG GAGNGTAGACGGATTATGCTTGAGGAGTTAGTCCGCTATAAAAGGAGTTA CAGTTTGCGAACTATTTTCCAGCTTCCTGTGGAGCCTGATAGAGGCTAGC TTTGCTTTTGGAGCCGTAGGACTGAACGAAGAAACGTTTGAAAATGAACA CAAACTTAAACATATTTCTACGTAAACTGATATGAAAGAGCGTAAACTAT TGTGATGGATCACTTATTTATTTATCATCTTTCAGACGAGACCAAATCAG TTGATCTGAACAACTGAATATATGTCAGTTCGCCACTCTGTGTGACATCA GTTCAATGCCAATGGCCGCCCGGGCCCCCTGTGCTGTAATAATATTTAGT TATTAATATAGGTTTAGTTATTAATATAGGTAATAACTGATGATTATCAA TGATAAAGTTATGCTAACGCCAACATTCCTAGCCAAAGGCACCATTATAT GAATTTTTGTTTAAGTGATATATAAATGATCGGATGATATGGACTTGTAT GTTTATGGTAAAATTCTAAGGTTAAATGTGACATTTTGGTGACAATATTA GTTTCTTACTCTTGTCGATCTTGAACTTTATAATCTCTAGGAAATGTTTG TCCGTCGTGGCGAATCCAGTATCATAGCATACTACAACAACATTGTACAC CAGTTTCATCGAATAAAAATTATGTATACAAAAC

Coding sequence (CDS) from alignment at Sc0000000:4459354..4461137+

>BlTCONS00000612 ID=BlTCONS00000612|Name=BlTCONS00000612|organism=Branchiostoma lanceolatum|type=CDS|length=891bp|location=Sequence derived from alignment at Sc0000000:4459354..4461137+ (Branchiostoma lanceolatum)
ATGGCAGTCTCGCCGAGAGGACACCGCACACACGTCACTCTGTCCTGCAG
CATTTGTTTCGAGGAGTTTCCCGACGCTAAGCTTCTGCCGTGCTGTCACA
GCTTCTGCTGGCGGTGCCTGATCAACCACGAGGCCGAGAGAGCGGACTTC
CCTTGCCCCGTCTGCGGGAGGACGGTCCACGTTCCCCCCGAAGGAATCCG
AGGTCTACCCGAGCACATCCCCGCCGAGGACCTACTTACCAGACTCGAGC
CTGGTGAGAACAAACATCCGGGAATCGAACCCGAGAATGGCGATCAGTTT
TGCCAGCGGTGCAGGGTGCCTGTGACAAGCGAACGAGTTCGCAGTCGCAA
TCACAGCGGTCACAAGATCACCCCATACCAACACCCTCCCCCCATTCCCG
AAGAAGTTCGTTCCCAAGCCCGACCGGTCGTCGAAAAGTGTTTGGACGGC
ATTCTTGGTCTACACGACCGTCAGAAAAACATCGACGCTTCTCTGCGAGT
TCTGCAGAAAAACAAGCTCAAGATTGCAGACGAGATTCGGGGGGAAACTC
AAATTTGGATCGCCGCCATCTTGGCTCGACAGGACCAACTCCTTCGTGTC
CTTGAAGACCGAACCGAAGAACAAAGGTCGGATGTTGTCGACGGAAGGCG
GAAAGTCCAAGCCAAGATAGCGGAAATGTCGACGCTTTGGGGACAGATGG
ATGACAACTTGTCAACCGGAACATTTTCGGCCGAATATTACGATCATTCG
GTTAATCAGATATGTGGGCCAGAAGATGGTGCACTTATTGAGGACACTGG
GACAGAAAGTCAGCCAAACGTTGTCTTTATCCCCAAACCACTAACTAATG
ACGTAGTAATAGTTGGGGACCTTGCTTCAAGTATCCATTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000612-exon-Sc0000000-1564993656:4459354..4461137BlTCONS00000612-exon-Sc0000000-1564993656:4459354..4461137Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000612BlTCONS00000612-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:4459354..4461137 +
Properties
Property NameValue
GeneIDBlCUFF000334