BlTCONS00000603 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000603
Unique NameBlTCONS00000603
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:4398352..4401642+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000603 ID=BlTCONS00000603|Name=BlTCONS00000603|organism=Branchiostoma lanceolatum|type=mRNA|length=3291bp|location=Sequence derived from alignment at Sc0000000:4398352..4401642+ (Branchiostoma lanceolatum)
TTCACACGTGGTGTCACCTGTACGTACGAGTGTAAACCCGGATGTGTGAA AATCAGGGGGAGTAAGCGCAGGACATGTAAGACCCGACCGGCCAGATGGG CAGGAGGGAGAGGGTTGAAATGCTCATGTACGTATTAATTTCATCGAGTT AAGTATGAATCTCTAGTCTGTTGAAAATTTTAAGGGGGAATGCATATTTA CACACATACACACACACACACACACACACACACACACACACACACACATA TATATATGCATACAAACACGAAGGCACACAAACAAACACACTCAAACACG CACACATACACACACCACACACATACACACGCATACATACAGTGACACAC ACAAACACATAAACACACACACACACACAGACCCTCATTTCATTAAAGAA AATATACCTCCCATTTGACTATTGAACAGACCATACTGAATTTGACGGTA ATGCCTTTACAGTGAAGTTTGGTTAGAGGTCACGCCTGTGAACAATTTGT TTTCTTTAGTGAGTAGTTTAAGCCATGTCACTGGTTCCGGTCGTGTACGT GTCTTTGGTCATAGCTATTTTCATTGTTGTGAAACTGATTGTTACAAAAT CATTTTCCACAGGCAAGCCATGCAGAATCCCCGCCATTCCAAACGCCGGA GCCGCCCCTGCAGGACCATGCTTCAACACGTCCTCTGCAGCCGCGGGCAC GACCTGTCCTTTCCTGTGCGACCCAGGTTACACGAGCCTCGCTGGGAACA CAGACCAGACCTGTGTGAACGGGCGGTGGACGGGACCAAACGTAGTCTGT GGTAGGAGATATTGTTTTACTTTGAAGTACGATTGAATTTACTATTAACC TGAAGTGGTTCTAAAGTTCCGTAATTTGAATGCCAAGCACGTCGACACTA ACAGGAAGTTGGGTCAAAAGTGCTAGAAATATCCAAGGAAGGCGGCAGAA AATGGAATTCGGGTCCTGTCCAGAGTTTTCCCAGGCGCATCATACAGTGT TTCATTAATATTTTGCATGAGTATTTAAAACAGCTCAGATATCATTGACG ATGAACAAGGAAAGCCTTCTGAAGTAAAACAAGACTGTTACAAAATCCCA AAGATATTTCACGGAGGTATGGTATTTGTTTCATATTGGTAACTTATAAC ATGCTATTGCTTTTCAGAGTCGAGTTTCAAGCTGGCATAGAAGAATCTTC AGTTACGACTCGGAAAAGAGTTGTCTAACGAAGTCGGGCTGAGTGACTTT TGGGACGCCTTGGACGAACTGAACGACATCGAGCCCAACACCATCGTGAG TGGGAACGTCACCGACAAGCTGGCCCTCACCCCACCGCGCTGGAAAATGG TCTACAGCGGGACATCAGACAAACACATACCGCTGTCCTTGTATACACCA GCGTTCGAAGAGTTCAACGCGGAGGCATTTTTTCCACACGAAAGTAAGTG CAATAGCTATCATAATTATCAATCGATCTTATCGTTCACCATTCTTACAA TAAATGACTTCAAGTTGTCAGATACTGACGATTATGATGTTTTTAACAAA GAATTTACACGTGCGATGATGACATTAAATTTGGCGCCATTGACGTCATC CTCGTAGGTGATGGACAGTCGAAGAAAAAACGGCTAGTGTGTTTTGAATA GACCAATCAGATAGCCCTGTTCAAATCCGTCAGAAAGTAGCAATGCAAAA TAAAAACAGAAGAATGAAAAAATGACGGGCATGCGGCCACTCTCATATCA GTTGGGCCAAATTTTGCCATGCTATCATTGCTTGAACTGCTAATTGTGAT CAATAGTCAGAATTGGTCTTATTCACGGGCCTATGTCTCTAAAGGTCCTG CAAAAGAGCACCAGAGCCAGAGGAAAAAAGCCCCTTTTATTTCGCCTTTT GACAGACAAGGACGACGTGGCACTGCACTCAAGTTTTTCATAACTTTTAA CAGTGCCACGTACATTGAACAATAGACCCATTTTTCACGTGGGTGGAGTG AGGAAAGTCGTGTTAAGTGCCTTTCCCAAGGGCACAGCGTCGGTGACGTC AGGATGATTCGAACCCGGGACCGCTTGGTTCTGGGCCGGTCGAACAACCT GTCGTTACACCACACGACCCCAAAAAAGCACGTTGATTGTGCACTGTTAA GATATTGCTTTGCCACCAAAATAACTCTGAGCAATGTTCTTTCGCCGCAG GTACAGTTGAAAGAGACATGTTCATGGACGATTCCTCGGGAACCTCTCCA CCGGATGTGGTCACCGAGAACTTCCGCCGGTGGTTCGACTCTCTCCCCAG AACCCTCCAGCTCCAGCATTTTACTGACGTCAAGCCAAACTTCGCGTCCG TGTTCTCATCTTTAGGTCAAGATTACGGTGACTTGTTTGGCGGGTCAGCC GAGGATAACTTCCGTCTGTCCGACTTGAATCGGGTCGACATCAATGATAA GTTCCACATGGAACTGTTTCCGCCCACGGTTAGGTATCAAGATGGTGGGC TTAGCATTGAAGCGGAGTTAGACGTTGATTTGGACGGTTTTAACGGTGTA GAATTGAGGTCGTTTTGGAGGGAAGGTAGTCTGCAAATCGGAGGTTCGGT CAGTTTCGACCAAAATGGCAACTTCGACACCGCCATTTTCGGATTAAACT GGACATTTTAGGGACCAACTAAACGATAAGGAGAGAAAGCAGCGAACATG TCTAGCAAAGAAGATAATATTCAATGTTTTGTACTGAAGCAAATATAATC CTCGTCATGTAGGAGATCGAGTGCACTAGTGATATGAGGTACAATTATTT GATATGAAAACTTTGTAACTTTCCTAATCAGCGTGGTACATTGTTCACTA GATTAATTTACCAATAGCAAGTATCATAATACATATATCTGTGTGCTGAA ATGTATGGTCGTTTTCTACTGTGTAAAAGATGCATCTACGTTTTTGGTTT GTGCATTAAATCTGGCTGAAAATGGACATCGGGACTGTAACATTGTTTGG TAATGACATATACATGTATATGGTGCACGAAAGCAAACGGCTTCCCCGAG TGCCCAAGGTAATATTGCACCTTTACGTAATCCACAGGTGTAAATTCAAG AACTGTATCAATCGCCACATCAAGGACATTATCCAGCGCCATATCACGGG ATAGCTGCTAGGCATTGAGAAAAAAGCTATCTATAAAAGAATTGCATTTG GTGTCAGCTACTTACTATAACGTTAAGGTGTAAATGTTAATGACCTGCTA TAATCCCCTCCCTCCAATCCTACATTAAGGACGGAGGTTTT

Coding sequence (CDS) from alignment at Sc0000000:4398352..4401642+

>BlTCONS00000603 ID=BlTCONS00000603|Name=BlTCONS00000603|organism=Branchiostoma lanceolatum|type=CDS|length=558bp|location=Sequence derived from alignment at Sc0000000:4398352..4401642+ (Branchiostoma lanceolatum)
ATGGTCTACAGCGGGACATCAGACAAACACATACCGCTGTCCTTGTATAC
ACCAGCGTTCGAAGAGTTCAACGCGGAGGCATTTTTTCCACACGAAAGTA
CAGTTGAAAGAGACATGTTCATGGACGATTCCTCGGGAACCTCTCCACCG
GATGTGGTCACCGAGAACTTCCGCCGGTGGTTCGACTCTCTCCCCAGAAC
CCTCCAGCTCCAGCATTTTACTGACGTCAAGCCAAACTTCGCGTCCGTGT
TCTCATCTTTAGGTCAAGATTACGGTGACTTGTTTGGCGGGTCAGCCGAG
GATAACTTCCGTCTGTCCGACTTGAATCGGGTCGACATCAATGATAAGTT
CCACATGGAACTGTTTCCGCCCACGGTTAGGTATCAAGATGGTGGGCTTA
GCATTGAAGCGGAGTTAGACGTTGATTTGGACGGTTTTAACGGTGTAGAA
TTGAGGTCGTTTTGGAGGGAAGGTAGTCTGCAAATCGGAGGTTCGGTCAG
TTTCGACCAAAATGGCAACTTCGACACCGCCATTTTCGGATTAAACTGGA
CATTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000603BlTCONS00000603-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000603-exon-Sc0000000-1564993656:4398352..4398478BlTCONS00000603-exon-Sc0000000-1564993656:4398352..4398478Branchiostoma lanceolatumexon
BlTCONS00000603-exon-Sc0000000-1564993656:4398964..4399152BlTCONS00000603-exon-Sc0000000-1564993656:4398964..4399152Branchiostoma lanceolatumexon
BlTCONS00000603-exon-Sc0000000-1564993656:4399519..4399794BlTCONS00000603-exon-Sc0000000-1564993656:4399519..4399794Branchiostoma lanceolatumexon
BlTCONS00000603-exon-Sc0000000-1564993656:4400552..4401642BlTCONS00000603-exon-Sc0000000-1564993656:4400552..4401642Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:4398352..4401642 +
Properties
Property NameValue
GeneIDBlCUFF000330