BlTCONS00000600 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000600
Unique NameBlTCONS00000600
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:4387449..4388978+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000600 ID=BlTCONS00000600|Name=BlTCONS00000600|organism=Branchiostoma lanceolatum|type=mRNA|length=1530bp|location=Sequence derived from alignment at Sc0000000:4387449..4388978+ (Branchiostoma lanceolatum)
AGTGCACAGAGTCTTGGGGCATCTGCGGTAGCCATGCGGTCTGTAATAAC TCTATCGGCTACTTCGAGTGTGCCTGCTACCGAGGTTTTGCCATGATGTC AGGTGGCTGCGGGGGTAAGAACATTAGTCCAGCGGAATAGCTTTAAACAA ATCTGTCTAAAAGCACCAAATTTAGCACACATGTAAGTCAATGTATTCCC AACAAATCTGGATGTAGAGACATCTTAAGTTCTGTTCGGGCGCGATTTTC TGTCACCTTTAGCTATTGTATTTTTGAATTACATTTTTGTCCCCAGTGCC ATGGAAGATAAATCATGCTTAGCGACCACCATACAACACTATATAGTTAT TGTTTATTCCTATACAAGTACTAAGACTACAATCGTTAACTTTAGAAATG CGTGCTTCAGTATAACGTTAACTCTCGCGGAGGCTAATTATTTGTATCTA CGTTGGATAACGCAAGTTTTTAGCACACAACCAGTATATAACCACCTGCC GACTTCTGTCAGCTTCCTCAGAGCAATACTGACCGGCTCTGCTTCGCACT GCAGGTAGCTGTCGCTGCTGCAGTGTACTAATTGTGTGCAAAGAATTTTG TTTACAAGTGATGTGCCAACCTAATGAAACTATTTAAGGAATATCTATGT TGTTTGCAGACGTAGATGAGTGTGCTGCCAGTGACTACCCCTGCCACCAG AACGCCTTCTGCTACAACACCATAGGATCGTTCGCCTGCATTTGCACGGA AGGATTCATCGGAAGCGGGACGTCGTGTAAGGGTAAGTCGTTGTCACCAT ACCAGGCTACAATGCCTTCCTTCATTCCTTCATTCCTTCATTCCTTCATT CCTTCATTCATTCCTTCATTCCTTCATTCCTTCATTCCTTCATTCCTTCA TTCCTTCATTCCTTCATTCCTCCCAACAAACAAATAAACAAAGACCATAT TCTCTACCAGAACTTTCGCTTGCATGTATCAATTAACGGCCCTGGCGCAC CAATTTGCGATCAATCCTTTAGCGCTTGTAAGCCGTCACCAGCCGATCAC GTCACCCCAAGAGACAAAGTGATAAGCGGGTAAAATCCCGTTCAAAAACG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTGATT GGCTGACGGCTCACCATCGCTAAAAGGAAGGACGGATCTTGATATATACA GGCGGCAGGCCTAGCATGAGAGGATATCCCAGACAGGCGTCCAGGAGATC TAGTGTGATCTCATATATTTTCTTATTGATTGATCATTTCTGAAATCACT AATCTAATGTGCTTCGCAATTCACAGAGGTTTGTACAACGACAACCGCAA AGACCACCCAGTCCCGGATTAAGACAACAACCGCGACGCCAGAAGAGGAA ACAACCTTCCCCATCATCCCAATCACAAGTAGAGATTCATCAACGGCAGA GTCAACCTCACATTGGATGATACAAACCTCGACAGAAGAAGACTTCTTTC AAGAGATAGTCACCCACGGACCGACAGCTG

Coding sequence (CDS) from alignment at Sc0000000:4387449..4388978+

>BlTCONS00000600 ID=BlTCONS00000600|Name=BlTCONS00000600|organism=Branchiostoma lanceolatum|type=CDS|length=438bp|location=Sequence derived from alignment at Sc0000000:4387449..4388978+ (Branchiostoma lanceolatum)
TGCACAGAGTCTTGGGGCATCTGCGGTAGCCATGCGGTCTGTAATAACTC
TATCGGCTACTTCGAGTGTGCCTGCTACCGAGGTTTTGCCATGATGTCAG
GTGGCTGCGGGGACGTAGATGAGTGTGCTGCCAGTGACTACCCCTGCCAC
CAGAACGCCTTCTGCTACAACACCATAGGATCGTTCGCCTGCATTTGCAC
GGAAGGATTCATCGGAAGCGGGACGTCGTGTAAGGAGGTTTGTACAACGA
CAACCGCAAAGACCACCCAGTCCCGGATTAAGACAACAACCGCGACGCCA
GAAGAGGAAACAACCTTCCCCATCATCCCAATCACAAGTAGAGATTCATC
AACGGCAGAGTCAACCTCACATTGGATGATACAAACCTCGACAGAAGAAG
ACTTCTTTCAAGAGATAGTCACCCACGGACCGACAGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000600BlTCONS00000600-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000600-exon-Sc0000000-1564993656:4387449..4387562BlTCONS00000600-exon-Sc0000000-1564993656:4387449..4387562Branchiostoma lanceolatumexon
BlTCONS00000600-exon-Sc0000000-1564993656:4388108..4388230BlTCONS00000600-exon-Sc0000000-1564993656:4388108..4388230Branchiostoma lanceolatumexon
BlTCONS00000600-exon-Sc0000000-1564993656:4388775..4388978BlTCONS00000600-exon-Sc0000000-1564993656:4388775..4388978Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:4387449..4388978 +
Properties
Property NameValue
GeneIDBlCUFF000327