BlTCONS00000597 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000597
Unique NameBlTCONS00000597
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:4380336..4381958+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000597 ID=BlTCONS00000597|Name=BlTCONS00000597|organism=Branchiostoma lanceolatum|type=mRNA|length=1623bp|location=Sequence derived from alignment at Sc0000000:4380336..4381958+ (Branchiostoma lanceolatum)
GTCCAGTGTGACCTGCAAGGGTGATGGAACCTGGAGTGGGAGCGTTCCTG
CGTGCAATGGTAAATCAAGTATTACTACTGAATAAGCACTTTCACATTTC
CAAGTACGTATGAGCGGCGACAGAAATTGAGGGTAACACGTTTAAGGTGA
AGACAGGCCCCTGAAACAACATGCCTGGATATTGTTATGCAAATCCAGAC
AATGGTCAAGACGAGAATTGTTTACAAATCAGGGGCGTTCACCTTTGACA
TATTACTCACAGTTCCTGTCACCGCGCATGCGTACAGAGCAGTGTGAAAG
AGCTTATTCATTTACACTACGATTCTTACTGAAACATTACGAATCTTATT
GTAAAACTATTGTATTCACCATTTCGCCGAACAGCTAAAATGACGTATGA
TAAGTTTGTTTGTTTGTTTTCCTAATGTTGTATCAAAATTTAGAATGAAG
TTATACAATCTACTAACAACAAATATGACCATTCATTATATCTTTACAGC
TGATATCGTGAGTCTGATGGTTACCGTTGGAGACTGTTGGTAGCTTGTTC
TAACCTTTGTTTTGTTGCGTAATTATATACAATGTCATTTGTAATGATGA
TACTTTCAAATTGTTCCAGCCATACACTGCCCCAGCCTGACTTCATTGGC
TCACGGCTACGTCATCGGCTCCAACTCCTTCCGGAATGTGGTGACGTTTC
ACTGTCTCCCTGGCTACGAGCTTATCGGGGATGAAAGTCTGACATGCCAG
GCGGACAGGACGTGGAGCGGCCCCCTACCGACTTGCGATGGTAATTCACT
CACCTATCTATTGAAGAAAATCTAGATTAAAGATTATGAGCACAATCCTG
GTTCAGAAATGTTTAGTATGTTTTACATTGAATATATATTTGATTTGAGA
CTTGCGTTATGCACAACTCTATTTGGGACCTCAATTGCAAGATTACTATC
AATTGCAAACATACTTTGTGAATGCAGCATTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCACTGGACCCGCGGCACGCT
GGTGGTATCGCCGCGGCCGATTGAATTGACAAAGCACTCAACGAATTTCA
TCGACAACAAAATGATATTTTAAAGCTTTGTGTGTATTGTTGTCTTTTTG
GTCATACTGGTACATTTTGAATGATATTCCTATTATAAAGTCAAGGGTAA
CACAAATCCAGTTTAGGACGCAGCGACGCCGCCAGCGTGCCGCATGTTCA
GTGAGAGCTCGAGGGGGCTTACGCTTCATCATTTGGTGATCAGCTGCGAC
TGTCTAGTTTAAACATCCTACAAGAATGCCTTCGGCATTAAAAGAAACCC
TTTGATGGTAGCTGTTTTGTGCATGATAAGATTTTGTATAATATGTTTAT
GCTCATTACAGAGGTGAAATGTCCAGCACAAGCGGCTCCCACCAACGGAG
CCAAGATCGGCGGAAACGTCTACAACGAAGTGGTCACGTTCATGTGCGTG
TCAGGGTATCACCTGGTCGGTTCTTCTAGTGCCATGTGCCAAGGTGACGG
CTCGTGGACTGCGCCGACTCCGA

Coding sequence (CDS) from alignment at Sc0000000:4380336..4381958+

>BlTCONS00000597 ID=BlTCONS00000597|Name=BlTCONS00000597|organism=Branchiostoma lanceolatum|type=CDS|length=390bp|location=Sequence derived from alignment at Sc0000000:4380336..4381958+ (Branchiostoma lanceolatum)
TCCAGTGTGACCTGCAAGGGTGATGGAACCTGGAGTGGGAGCGTTCCTGC
GTGCAATGCCATACACTGCCCCAGCCTGACTTCATTGGCTCACGGCTACG
TCATCGGCTCCAACTCCTTCCGGAATGTGGTGACGTTTCACTGTCTCCCT
GGCTACGAGCTTATCGGGGATGAAAGTCTGACATGCCAGGCGGACAGGAC
GTGGAGCGGCCCCCTACCGACTTGCGATGAGGTGAAATGTCCAGCACAAG
CGGCTCCCACCAACGGAGCCAAGATCGGCGGAAACGTCTACAACGAAGTG
GTCACGTTCATGTGCGTGTCAGGGTATCACCTGGTCGGTTCTTCTAGTGC
CATGTGCCAAGGTGACGGCTCGTGGACTGCGCCGACTCCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000597BlTCONS00000597-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000597-exon-Sc0000000-1564993656:4380336..4380394BlTCONS00000597-exon-Sc0000000-1564993656:4380336..4380394Branchiostoma lanceolatumexon
BlTCONS00000597-exon-Sc0000000-1564993656:4380955..4381125BlTCONS00000597-exon-Sc0000000-1564993656:4380955..4381125Branchiostoma lanceolatumexon
BlTCONS00000597-exon-Sc0000000-1564993656:4381797..4381958BlTCONS00000597-exon-Sc0000000-1564993656:4381797..4381958Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:4380336..4381958 +
Properties
Property NameValue
GeneIDBlCUFF000324