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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:4307732..4317206+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000590 ID=BlTCONS00000590|Name=BlTCONS00000590|organism=Branchiostoma lanceolatum|type=mRNA|length=9475bp|location=Sequence derived from alignment at Sc0000000:4307732..4317206+ (Branchiostoma lanceolatum)
TTTCGTCGCAACGCTAAAGGGTAGTGAAGAAGAGGTCTGGATCGGCCTGA
GAAGGAACAGCGATGAAATTTGGAAGTGGATTGATGGAACCTCGCTGGAG
GAAAGCTTTCACGATTGGGCTGTCGAATGGCACACACGCCACGGCAGATG
TGTTCTTCACGGCGTGTATACTAACTATCAGAATGTGTGGAAGAAAACAG
ATTGCGCAAGACTATACAGCTATGTATGCCAGAAAGGTGGGGCTTTTCAG
TATCACTTCTGTTACTTACTTGTCTTTCTATTGCCATGCTGCATATCAAC
TACATTTGAACTGTAAGAATAAGTCGGCAGGTTTTTGTCAGAGTCGGTTG
GGTAACCGGAAGTACAACCTCTTTTTCATGGTCTTAGAAGAATACTAATG
CACTATACCCTAATGTCTGATTGCGTCACTGTTGCCGTGATTACACAAAA
AACGCCATCTATCTCAAACGTCAGATTTTGCTGTCAAATATCCCATATAA
AATTTCGTGGGTAAACGGGACACAGCGTCAAAGCTTCGCGCCTTTACATA
TGGTTGGCAATTGCACCGGGTCTTTAACAGCTATAACTTATAAGGTTGTT
ACTAGTACTTTCTTACTTGCTTGCTTATGTCAGGTTGAGGCGTCTTCCCT
CATCCCAAACGATCTTGGTTTCTAGAAGTTCTTTGTCCGACATTGACCTC
CCAAACCATTTAGTTTGTCAAGTTTACCTGTAAAACTGCAGGTAACAAAC
AGAATTGCACTGTATTCGATTAGATAGCAGCGTATGTCATAAAATTCTTC
TGTTAACTCATGAAATTACACTTCATTCAGAACTTTATCAAGATAGCTAA
GTACACTTTGGCATCCATGTTCGTAAGGCCCAATAATAAGTGGTTTCTGT
AAAAACGAAGGAAAGAAATTTACGATAGAAAACAGTGACATGCAATCATT
CCTTTGATCACAATGACTGAAGAGAATGTACTCTGGCGGAATGAAGTAGC
CACAATATGCGAAAGTAAAAGATTATTATAGAACTCCTTTTGTATTTTTC
GTGATTATGTCACGTGTAAAGCACATGCAAAATGAACCACCAGGCATAGA
AGCGTTAAACCCGTCAGTTGGAGTAATTGGAGATGACAGGTTCCTCCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGCCAGAA
AGGTGGGGCTTTTCAGTATCACTTTTGTTATTTACTTGTCTTTCTATTGC
CATGCTGCATATCAACTACATTTGAACTGTAAGAATAAGTCGGCAGGTTT
TTGTCAGAGTCGGTTGGGTAACCGGAAGTACAACCTCTTTTTCATGGTCT
TAGAAGAATACTAATGCACTATACCCTAATGTCTGATTGCGTCACTGTTG
CCGTGATTACACAAAAAACGCCATCTATCTCAAACGTCAGATTTTGCTGT
CAAATATCCCATATAAAATTTCGTGGGTAAACGGGACACAGCGTCAAAGC
TTCGCGCCTTTACATATGGTTGGCAATTGCACCGGGTCTTTAACAGCTAT
AACTTATAAGGTTGTTACTAGTACTTTCTTACTTGCTTGCTTATGTCAGG
TTGAGGCGTCTTCCCTCATCCCAAACGATCTTGGTTTCTAGAAGTTCTTT
GTCCGACATTGACCTCCCAAACCATTTAGTTTGTCAAGTTTACCTGTAAA
ACTGCAGGTAACAAACAGAATTGCACTGTATTCGATTAGATAGCAGCGTA
TGTCATAAAATTCTTCTGTTAACTCATGAAATTACACTTCATTCAGAACT
TTATCAAGATAGCTAAGTACACTTTGGCATCCATGTTCGTAAGGCCCAAT
AATAAGTGGTTTCTGTAAAAACGAAGGAAAGAAATTTACGATAGAAAACA
GTGACATGCAATCATTCCTTTGATCACAATGACTGAAGAGAATGTACTCT
GGCGGAATGAAGTAGCCACAATATGCGAAAGTAAAAGATTATTATAGAAC
TCCTTTTGTATTTTTCGTGATTATGTCACGTGTAAAGCACATGCAAAATG
AACCACCAGGCATAGAAGCGTTAAACCCGTCAGTTGGAGTAATTGGAGAT
GACAGGTTCCTCCCGGTTGCCAACCAAAGGTCACAGGTCACAGAAGAGTG
TTATGGCCTTGGCAACACATATCATGAACAATGACGAACAATGAAACAAA
TATAGATAAGTAGACTCTCAAAGAGTGTGTCACTATATCATCACCTTCGA
TTGAATACTCTTTCTTTCTTACTTCACGAGCGGATATCGTATCGAAAATT
ATATGCGCAGTTTACACGCGGTTTTCCCAATGTCACCCTGCAATGTTTAT
ATATTTGGTGCGTCACTAAATCATAAATCATGATGATGGTCACGCCACAC
CACACCCAGTGCCGCCCTGCCAGCCCACATAGCAGGTAACGTTACAGGAT
AACATACCTGCGCAGTAGGACGTGTGTAGTCAGGGAAAAAAAGTACAGCT
AGAGGAAACATGGACGACCCTACATAAAAGGAGAGCAGCTTGTGCTTGGA
ATGTCACCACTGTACACAAACATGAGGCTCGTCAAGCATATTTCTGTTGG
CGCTGTGTTCGTATTTCTGACGCTGATAGAAGAAGGATTTCTGACAAGCG
TTATTGATCCGGATGGTAACACTATCTATAGTCCAGGTAGGTTACTCTTT
TTCCTTGTTGGCCTCTTGAAGCTGCATCCAACTCCTTCTTTTTTATCTGT
AGTTGTTGTTCAACGTTTTAATTCTGATAAAAACAACAGCTTATTGCAGA
AACTGCAAAGTTCTTAATACGTTATGACATTCTTTATAGTCTAGTTGCAC
TAGATGCAAGCAGACCAAAGCAACACCGCCTGTTCCAGTTGCAGTTTTCT
CACATTCATACATGCCCTTGGGAGAGGATAATTGCGATTCTAAACTCTCG
AAGGTGTAACATTGAATGCGCTAAGGGTGCTTGTCAGTGATAGAAATTTT
GTAGGGACAGCTTTTTATGGTCTAGTATCATTTGGATAATTCCGGAACTA
TACTATCTAACTTTAAGTTTGCTGTTTCTAACTTTTGAATGTTATATACA
AGTTCACAACCCGTCAAAATATTTTGTGCGATTAAGAGCAAATTGTCTGC
TTCTTTTCCAACATCTCATGTTTTGACGAGTTCTTTCAAGGCGTTATATG
GTTCATCAGCCTTCTACTTGACAGTCTCTACCAGAGTTAAGTGAAACAAG
AGAAACAAACAATACATACTATGCAACATTTCTTATTTCAGGCACCTGTT
GGGCAGACTCCCTTATTCACGGCTCAAGCTGCTTCAAACTGTTCAGTGAG
GTAGTTACGTACCCACGTGCCCAGGATAAGTGTGAAGACTTCGGAGCTAA
GCTTGCTATGGTGAAAGACCAGAGCACCAATAATTTCCTCATAACGGTAA
CACAGGGTAGTACTGTAGATGCGTGGATCGGCCTTAGTTCCCAAACCCAT
AACGACTGGATGTGGAGTGACGGTACAAACCTGGAAAGTCAAAGCTTTCG
AGCCTGGGCACCGGATGAGCCAGGCGGCAACAGAGACATCAACTGTGCTC
GGCTCAGCGTGTCTTCTGCCGATCAGAATACGTGGAAAGATATACCTTGC
GACTCATTATACGGCTATATCTGCCAGAAAGGTTGGGTATTTCAGTATCG
TTTCTGTTACTACTAAAGAACTTAATTGCACGACAATTGTACACGGTACA
AAGCATGGCAACAACTATCAAAACATAATACAAAATAGAAGTATAGAATA
AAACCTAACAACATCCGAATTACTAATATGATACAATAAGGGCTAGCAAA
CGTTTTTGATATAGTGTTAACATCGAGTTGGGCTAATCATTAGTTTCGAT
ATTTTTTCTAATGACAAAACAGTCGTTTAAATATTTACCTATTTTTGCAT
TGTGGGGGGTTGTTGCATTTGAATATATACTCAAAACAGTTTGTAGCATC
GAGACTCTTAAAACATACTATTACCGTGCTGCGTATCAACTGTATCTTCA
GTGTTCAAACCTAATGTGTCCAAGTTGTCATCTTTCTCCCGATCTTAAGG
AAGGACGTGGGTTTCCTTAAACTGTCTCCGCTTACTCATAGATATTAGAC
ATTAATGTTTGCTTAGCAAAAAGCTGGCAGACAAGTCCCTTGTGTCTATT
GACGTCACTGTTACCATGTTAAACTTAACATGCCATCTATTTCACCCCAT
CTCATCCATCTCTTGTTCATCACAACCGTCACTCAAACTTGGTGACAAGG
TAATGAATCGCCTTGTTGCACTTGGGCTTTAACTAGTAGTAAGTTTGTAG
ATTGCTAAAACTCAGGCACCCGTGTTCGTATGTCTCATTTATACGTGGTT
TCCCTAGCGAGGAAGAAAAGAAAGGTATGATGAAAAACGATGACATTAGA
TCACTCGTTTGTTTACAATGATTGAATGGCTGACGTGAATGCACTCTGGT
GGAATTAAATAGCAATATGCTAAGTGAGATATAATTACAGGAGTCCTTTT
CTATTTTTTGTAATCATGCCACATGGAAAGCACCTGAAAAATGAACCATC
AGGCAGAGATGTGTTTCTGTATCTGTATCTATATAGCCGGTACAACCGCC
AGTAGGAGTAACACACCAGCTTCGCAGGCACGCGGCGCGACAGCAGCTGG
TTATATTACACTGAACGGTCTGTTACACCTAGTCTTTGCATGTAAAGTTT
CAGCCCGTCAGTTGGAGTAATTGGGGACGGCAGGCGCTCTGCACAGTTGC
CAATCAAATGTCATAGGTCACACTCGGAAGAGTGTTATGCTCTTGACAAC
ACGTACCTGCACATTTGGACGACTAATAATTCGAGTTGAAACAAATATGC
GCAAATAGTCACAATGATTGTGCCACAATAACATGTCTTTCTGCGATTGA
ATACTCTTTCTGTGTAATTTCACGCGCGAATATCGTATCAATGAATTTAG
TGCAGTTCACACGTGGTTTCCAATGTCACCAAGCATTGATATGTTTAGTA
CGTCACTAAGTCATTAATCATGTCATGATGATGGTCACACCACACCAAGT
GTCACAATGTCAGGCCACTTAGCAGTTGCAGGATAACATACCTGCGCAAT
TTCTAAACATGGACGACCCTGCGTAAAAGGAGAGCAACTATTGTGCTTGT
ATATCCCAACTGGGCACAAACATGCGCCCCGTCAAGTGTATTTCTGTTGG
GGCTGTGTTCGTATTTCTGACGCTGATAGAAGAAGCATTTCTTACAAGTG
TTCCTGATTGGGATGGTGACATTAACTTTAGTCCAGGTGGGTTACTCTTC
TTCTTTGTTGGCCTCTTGAGACTGCATCCAAGTCCTTCGTTTTTATCGAT
AGTCGTTGTTCAACGTTTTAAATCTGATGTTAACAGCAACAGCTTTTTTT
TTAGAAAATACAAAGTTCTTGCTATGCAATGACAGTCTTTATATCAATCA
GACCAGGGCAATACCAGCTATCAATTCAATTGTAGTTTTACGACTCTAAC
GGACATACAAGCACTTAGAAGGGGATATATACTTGTCATTTTAAAAGCGC
ATGCTTGAAGGTGTAACTTCGAAGGTGTAAAGGGTGCTTGCCAATGCTCT
CGTTTCAGATGAACATTTAGTACTTAGCTTCGGTTGGACACGTAAAGCTG
TTTGAACCCAACACATTGGTTCACAACAGTAGTATTATTTTCTATAGTTC
TATTGACTCTGACCGGTTTAACCTACTTGATTGCTTTTATAACAGACAGC
AAACGTTAAAGTGAAAATGGCAATCAACATTGCACAATTTTTCAACCCCT
AAGTAAACATCTAAACTTTGCCGTTACGTTCGGTTAGCTCCATATATTCT
ACAAAAATCGTCATGTTGCACCTGGGCTTTCACAACTAGCAAGTCTGCTA
ATACACATGTTCGTATTCCTCACATATAAGTGGTTTCCCTGGCAACGAAT
AAAGGAACGCAAGATAAAACGGTGACATGAGATATCACTCGTTTGTTCAT
AATGACTGTATGGCTGACGACAATGCACTCTGGTGGAATCAAATATCAAT
ATGCTAAGTAAAAGATAATTACAGGAGTTCTTTTGTGTTTTCCGTGATCA
CGCCACCTGGAAAGCATCAAAGGTGACAGACATCAGCACATCTGTCTGTC
ACAGACGTTGTCCTAGACAACGTAACTGACCGAGATTCTAACAATGCACT
AGTATCTATAACCGAGATGATACATTTTTTGTAGGTGATTTAGTGATATG
ATACAAAAGTATGCATGATTTCAGAGTAGTATGATATTGACTGATGTTTC
CTTGCACATTTCCAGCAACGTGACAGTGTACAAATACAACACTTCTTTCC
AATTGTCACTGACATGTTATCCCTCTTTTGTTCAATTGATAGAACATCTC
TGATGTGAAAGCACTCGGTTGGAATAAAAATGCAATCAGCAAAGTGATCT
GTAACTAGAAAGGCCGTCATTTGCCCCTGAGCAAATACAGCATGTTTAGC
CATACTCCTCCCCATGCAAGAAGTGGGCTGTCCCAAAATAATACTTGGGC
AAATCGAAATATTAACTGCATGTAGAAAGGCAACATTTGCGAGAGCATCA
TACTTCGCCAATCTCCCTCCCGATGCATAAATTGACTGTTCCAAAATCAC
CCGTGCAAAAAATTCTCTCTACAAGTTCTGCGAGATCCCAAGAGCTTCTT
ACTGCAAAGGCTTGCGTGTGTTCCTGCAATATGACCTCAGATGACCTAAA
TAGAACAGTGTTCTTTGGCCAGTAGCAAATGGAACTCGGGGATCCTTAGA
TAGAACATGGATTCCTTGGCCAGGAGCAAATAGAACATGGAACGGGGATA
CCACTTTTGGCCTGTTTTTGGTCTGGAAATGGGCCCAAAAGTCCCCAAAA
TGAAGCATTTTGAAGTGATGTACACCAGAAATGTGATTGAAGTCCTGTAG
GGACATGTTCAAGGCACCCTTGTACCGAATTTCAGGTCACTTGCTTGCAA
TACCAGGGCACAGGAGCCCAAAATATAAAAATTGTCTAAAAATGCCCCAA
AAAACCTCCATAAAAATGATTTTTAGGCCTGTTTCAAAACAATTAAAAAA
GGGTCTGGGGGTATTTGCAATCTTTACCTACATGCCAAATTTCAGGTCGT
TTGGCCCAAAAATGACGGAGTAGATTCCATTTGAAGATATGGCAGGAGAA
GAAGAAGAAGAAGAAGAAGAACATGTACAAAAACAATATGTTGAGCCATA
CTGGGTATGGCTAAACATAATTACAGTGGCTTCTTTGTATCCAGGCCATC
TCGATGACAATCGATGGATCATGGTGTCAAGAGATACAAAAGCAAACTAT
GACGACCCACGTTCCGATGACACTTTCCGTTACCATGGATACTTTTTTCG
CAGAAAACAAGCTCTCCTTCCAAGAACCCTTTGTGTCGCTAAACCAGGCA
CTAGTAGCCCCATGCGGCCTTATGATGTATTCAATAACACTCCCACACAA
GGAAGCATATTGTAGCCTCCTCCGGGGTTCCCAAGCGAAATGGTTAGCCT
CTTACAATAGCTACCGCTAGTCGGACAACCTTGGATGCTGTACCGTGTAC
ACAGTCAATCGAATAAATAAATGGGATCCCCAGCAAAAGACCCTGGCCCC
GATGAGTTGAAAATCGCGAATCATCGCTCCCAACAAAATTATCACTGGCG
CCGCCTGGGAGGCCTGCAAAGGAGACTAGCATATCAGGTGTATCGGTGTG
ATAGATAGATAGACCAGCAAAACAGTTGTCAGGCCTTAATTTGCATTAGA
TCCTTGGGACATCTTTCTATGCTTTCAAAATATTCATTACCGCGTAGGGA
TGTTGCTCTGGTGACAAAATATCTATTTTTCACATTAAAATCGACAATTA
ATATGTGCATTTGTTTAGATATTTTATCTGCAAAACTTATTGTGGCGCAC
CAATAATGCTTTGGTCCCAATTACGCCGGTGCCCGTCTGGGGTGTGGCCA
CGCCAGAGCGTGCAAAAAAAGCCCGTGACCTACACGGCGGGGCCCGTTCT
TCCAATTGGGACCAAAGTGACGTCTTGAAATGGCTAATTTTATACTTTGC
TCGAAAGCATTCGAAGATAGTTTTTTGTGGTAGGCAAATGTGAATTTCAA
CATGCAAAGCCAATATGTAAATAATCACTATTCACAAACAGAAGACAGAC
ATTTTCTTTTACGCCGTTCATGTGTGGTTTATTGCAATCTCCTTTACTCT
ATTGTTTTATATTCAGCTGTGCAGTGTGTCTCGCCGTCGCTCCCGGAGAA
TGGTAACTTTATAGCTTCTCCCGGCTCCGTCGGAAGCTTAGCGTATCAGC
CTAACGACGTGCTTCACTTCACATGCAACCCTGGACACAACTTGGATGGC
GCTCCTGCCCTGACATGCCGGGCTGATGGCACCTGGAGTGCAAGTCCCCC
AGTGTGCAGAGGTACAACCAAATAATCGATTGTTTGAAGATATCATGCTA
CAGTTGTTTATTTCTGTTTGTGACAATCAACGGAGGTTTAGTTGCTATAA
GCTAATGTAACATAGTACAACCAAAGAACATATAGTATTTAACATATATA
ACTTTACTTTACAACAAAGGTACAAAGTATGGTATCTAAAGTTATATAAC
TACAGTTCTATAAGGCTAATCTAACGAATACATGAGTGTATGATATGGGA
TGAGAATGGATTTTTACAATCATTGAAGGAATTTCTAACGTCTAGACAGT
CTTTGATATCTTTTCCTATGTATACCGTGCAGGGGTCGTTACATGTTAAT
ATGTCTTTTGAGATGAACTTTGGTATATACGATAATTATTTAGAGTGAAC
TACGTATATCAGAATATTTCGGACATACAATCAAAAAGTGATATTCGTCT
TCAATTAACTCTGAACAAAATGGGCAAACTCTTTGGTCGAAAGGATTTGT
TTAATTCCCCGGTTTCTATTCCTGATTTGTGACAAGCAATTCTGAATTTT
GTAACTAAATGTAGTTTGGAGATCTTATACAAGACTTGTTCTATAATTGA
TTTTTCCTAGAATCCACCGTAGGTTTGGTTTACTCGGCTCTTATTGCCAC
TAACTGAGTGCATTTTGTACCTATATGTAGTGGTACAGTGTCCCATACTG
ACGAACCCTGCAAACGGTCACGTAAGCGGCTCCAACTCCTTCGGAGACAG
AGTCCAGTTCGAGTGTAACTGGGGATACACGCTGGTTGGAGAGGATTCGC
TCACTTGCAAGGATACCGGTCATTG Coding sequence (CDS) from alignment at Sc0000000:4307732..4317206+ >BlTCONS00000590 ID=BlTCONS00000590|Name=BlTCONS00000590|organism=Branchiostoma lanceolatum|type=CDS|length=573bp|location=Sequence derived from alignment at Sc0000000:4307732..4317206+ (Branchiostoma lanceolatum)
TTCGTCGCAACGCTAAAGGGTAGTGAAGAAGAGGTCTGGATCGGCCTGAG
AAGGAACAGCGATGAAATTTGGAAGTGGATTGATGGAACCTCGCTGGAGG
AAAGCTTTCACGATTGGGCTGTCGAATGGCACACACGCCACGGCAGATGT
GTTCTTCACGGCGTGTATACTAACTATCAGAATGTGTGGAAGAAAACAGA
TTGCGCAAGACTATACAGCTATGTATGCCAGAAAGCTGTGCAGTGTGTCT
CGCCGTCGCTCCCGGAGAATGGTAACTTTATAGCTTCTCCCGGCTCCGTC
GGAAGCTTAGCGTATCAGCCTAACGACGTGCTTCACTTCACATGCAACCC
TGGACACAACTTGGATGGCGCTCCTGCCCTGACATGCCGGGCTGATGGCA
CCTGGAGTGCAAGTCCCCCAGTGTGCAGAGTGGTACAGTGTCCCATACTG
ACGAACCCTGCAAACGGTCACGTAAGCGGCTCCAACTCCTTCGGAGACAG
AGTCCAGTTCGAGTGTAACTGGGGATACACGCTGGTTGGAGAGGATTCGC
TCACTTGCAAGGATACCGGTCAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000590-exon-Sc0000000-1564993656:4307732..4307967 | BlTCONS00000590-exon-Sc0000000-1564993656:4307732..4307967 | Branchiostoma lanceolatum | exon |
| BlTCONS00000590-exon-Sc0000000-1564993656:4316198..4316392 | BlTCONS00000590-exon-Sc0000000-1564993656:4316198..4316392 | Branchiostoma lanceolatum | exon |
| BlTCONS00000590-exon-Sc0000000-1564993656:4317062..4317206 | BlTCONS00000590-exon-Sc0000000-1564993656:4317062..4317206 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:4307732..4317206 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000321 |
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