BlTCONS00000572 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000572
Unique NameBlTCONS00000572
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:4043007..4044772+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000572 ID=BlTCONS00000572|Name=BlTCONS00000572|organism=Branchiostoma lanceolatum|type=mRNA|length=1766bp|location=Sequence derived from alignment at Sc0000000:4043007..4044772+ (Branchiostoma lanceolatum)
CAAGAATAGAATTGTGGGAAAATTCTTTATGATAGTCTATTTGCATTAGT CTCATCCATGGGTCAATATCTTCAGAACACGATGATATCATCTATTTGAT GGACCTCCCTCCCCCAAGTGAAGGTATAGTTTGTTCCCCTTTAGGCGTTG TCTCACATTCCAAAATTAGGTGCGACAGTTTACAGTTTAGCCAACTCTGA AACAACATGGGTTCCGAAGAGTCAAAACCTGTTACAGTAGCAGAATTGCC CCACGATCTGGGTGAGGCCGCTAGAAAGTTAAAAAAGTATGACTTCCCTT TCGAGAACCTTGTGCTAGAGGGAGGAGGGGCAAAAGGCATCGCCTATGTC GGAGCAATGAAGGTGTGTGCATTTTTCCTGTTTTTAATGGTATACACTGG ACAATCCCTACCACAGGCGTGTTTGTTTGTGTAAATGTCTGAGAGTGTGA ATGGTAGTGTGCGCAAGTGTGCGTATGCATGTATGCACGTATGGGTCTAT GTATATATGTATGTTTGTCGATTTGTATGCATTTGTGTGCGTTTGTGATT ATGTGTGTGTTTTACTGTATGTTTGTGTTTTCTTGTGTCTGTGTGGGTGG CGTGTGTGTGCTTGTTTGTTTTTGCTTGATTGGTTAGCATGTATGTGTGT GTGCTTGTTTGTGTGTTTGTTGGTGTGTCTGTTGGTATGTATGTACATTT GCGTGCTTGTGCTTAAATGCGTTATACATATGTGATAAATGTTATACATA TTTATGTATATATAACAATAACAATAATAATTGTTATGTCAACACCACAC TTTTCGACTGGGACATGATAGCTTAGGTAGTACTTGTAGATGCATATGCA GGGCTTATTCCACAAGAAGTTGATGACATCAATTGTGATTACATGTAATT CCGTGTTAGTCTGACAGGTTCATATATGTCTGGGAATTGTTGCCCACACA AAAGCGAAAATGATAGTTGCCTAAATAATCAAATGCCAATTTCAACAATT TTATTGTCATTAGTGAATCCCATTTTTAGGGGGGGGGGGCGAAATCGCTG GAGGGGGCGAAGAGGGGTGACGAAATTTACCCCTCCCCATGCCAGAAGGG CAAAATTCTTTGGACTCTGGTCGTGTTACCGGTGAACTTTGGTGATTTTA TAGCTCGCAGACTCGATGGACGAGATATTTCATGCTATTTGACGATCCTG CAATTATAAAAGTAGCATAAAATCTACCTTCTTGTTACTTGTATGGTAAG TATGGAGCAAATCAAGTATCAAAGTATCTAGTTATCAGGAGAAAAGTAAA GTAACGTACTATCTATATTGTTCTGATTTTCTAGGTCCTGGAGGAGGCCG GGATCACACCGCAGATTAAGAGGTTTGCAGGAACTAGTGCAGGGGCCATA ACAGCTGGGCTTATGGCAATCGGTATGACGTCAGACGAAATAGTCAAGGA GATGGTTGACGTGGACATGGAAAGCACGCTTCTGGGTTTGTAATATACTT CGTATTGTATCATACAAACAGGTACATTTAATGGTCGCATGGCATTTTAG TCAACGTATGTACCGTATATGTGTTGTTCTTTGTTCTTGCAAACACGTTT GCCAACCACAGAACTTATCTGATAAACAGCATGCTTATGTGTATAGCTGT ATTTGTGATAAGGGATGATTGTAAGCATTGTCTGTCCTGTTTGTCAGCTA AAACTTTGGATATACAAGGAACAGTTCTTCAACCCATCCTTACAAACAAT GCACATTCTCAATGGC

Coding sequence (CDS) from alignment at Sc0000000:4043007..4044772+

>BlTCONS00000572 ID=BlTCONS00000572|Name=BlTCONS00000572|organism=Branchiostoma lanceolatum|type=CDS|length=315bp|location=Sequence derived from alignment at Sc0000000:4043007..4044772+ (Branchiostoma lanceolatum)
ATGGGTTCCGAAGAGTCAAAACCTGTTACAGTAGCAGAATTGCCCCACGA
TCTGGGTGAGGCCGCTAGAAAGTTAAAAAAGTATGACTTCCCTTTCGAGA
ACCTTGTGCTAGAGGGAGGAGGGGCAAAAGGCATCGCCTATGTCGGAGCA
ATGAAGGTCCTGGAGGAGGCCGGGATCACACCGCAGATTAAGAGGTTTGC
AGGAACTAGTGCAGGGGCCATAACAGCTGGGCTTATGGCAATCGGTATGA
CGTCAGACGAAATAGTCAAGGAGATGGTTGACGTGGACATGGAAAGCACG
CTTCTGGGTTTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000572-exon-Sc0000000-1564993656:4043007..4043368BlTCONS00000572-exon-Sc0000000-1564993656:4043007..4043368Branchiostoma lanceolatumexon
BlTCONS00000572-exon-Sc0000000-1564993656:4044341..4044772BlTCONS00000572-exon-Sc0000000-1564993656:4044341..4044772Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000572BlTCONS00000572-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:4043007..4044772 +
Properties
Property NameValue
GeneIDBlCUFF000306