|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3989249..3992937+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000567 ID=BlTCONS00000567|Name=BlTCONS00000567|organism=Branchiostoma lanceolatum|type=mRNA|length=3689bp|location=Sequence derived from alignment at Sc0000000:3989249..3992937+ (Branchiostoma lanceolatum)
TTTCAAAATGGCGGAAGCAGACGAACAAGTTGACAGGGGCGGCTGTGGTG
ACTGTGGAAAGACTCAAAAACCGAAGAGAAGGTTGCCAGAATGGATGAAA
GACATCGTTTTAGACAAGGTTAAGAATTCTACCGTGCCTACTCTACTCTA
CTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTA
CTCTACTCTACTCTACTCTACTGTACACTACTCTACTCTACTCTACTCTA
CTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTA
CTGTACACTACTCTACTCTACTCTACTCTTGATCTTGATTTGGTACTGGG
CAACACTCTACTAGTACTCTACTCTACTCTGCTCTGCTCTACTCTACTCT
ACTCTACTCTACTCTACTCTACTCTACTCTTGATCTTGATTTGGTACTGG
GCAACACTCTACTCTACTCTACTCTACTCTACTCTACTCTTGATCTTGAT
TTGGTACTGGGCAACACTCTACTAGTACTCTACACTACTCTGCTCTGCTC
TGCTCTGCTCTTCTCTTCTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTC
TACTCTGCTCTACTACTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTG
CTCTGCTCTGCTCTACTCATAAATCGTTGGTCATCATACTTCATAGGGTC
ATACCAGTCAGCTAAAAACTATGGTAACCTTTATTCACAAATTATCCCTT
TTATATCAATACTCAGGATCATACTAAAAAGAAGAGAAAACAGGGAGGAC
CACAGAAAGGTCACACACCACTTGTCCTGAACCTCCCAGTCCTGAAGTTC
ATAGGTAACGTGGTATACTGTTACCAGACAGGCGACTGTTCGTTCATGTG
TGAAGACATCATGTAAGTATATTCTCTTTGCCTTCTCTATTTTACTTGCA
AACCTTGAACTTTTTTCAGTGGTCTTATTTTTGTTGTTATAAGTGACCTC
TCCACCACAGATTNGTTGTTATAAGTGACCTCTCCAGCACAGATTCATGA
CACCATACCATTATGAATATACGTTTCTAATGTATTACTGTACAACGTTA
ACAGAACTGTTTTGGCACCACAAAATAAAGCCTCCCATTTCTGTTGTCGC
GGCAAAGATAACTAAATCTACTGTATTAATGTCAAGTGATTGATAATCCA
AAATCCTTATATGTTCAATCCTTATACATGTACCTCTTCCACATACATGA
AAATGATAATTCTTCATCTCCTTACAACTAGTCACTTGAATCATTATTAT
TATTTACAGGAGTAACACAACAGATGAGCGCAGCTGTGTTCTGGGGTTTG
ATATAGAGTGGCCAGTGACATACACAGCAGGGAAAGAAGAGAAGACAGCA
CTGCTCCAGCTCTGTCCCTCTCACAACAAGTGTTATCTCTTCCACCTGTC
TTGTATGGCTGGTATGCACATCAATGTAAAGTTATTTGCTTGTTTGTTTG
TTTGGAATATGGGTTGGTGGAAAGAGTGGTCCAGCCTGTATGGTGGTAAA
CATGGTACAGTCCAGTCGGGGTGAAAAAACTGACATAACTCTTTCTGCAT
GTGGTTGTGCCTTTTGGCAGAAATACTGGACTACTGGAATCTTTCTACAA
GTATGCATATAAACAAGACCTCCATAGCTAATGGTTATATACACTGTACA
TGTATTTCATGCCCAAATTTTCCATAGTTTTTTTCACTATGTGCAGTAAA
GGATATGTTTTCATTGGTCCTTGTCACATTCAGGTTTTCCTGGTGGACTG
AAGAAGCTTCTTGAGACTGAATCGATCAAAAAAGTTGGAGTTGGCATCCA
GGGGTGAGAAAGTATTTCTTATTGTTAGATCACAAATCAAGTTCTGCTAA
GATGTTAATTTTCCCAGACCTCCTCCCTGTGTTAAAGAAGAGTCTCAAAA
TTCTCCAAAATTCTCCAATGACTTGCAAATCTAGGAAGGTGAAAAGGTGG
TCTTGTGTTTAGAGTTGTTGACTTTCTGGGTTTGAATCCCTAGGCACGCA
GGCAACTCTTGCACCTATTTCAGGTGAATATGACTAGTACCAAGCTATGG
TTAAGGATGACCTCTGCCATGGGGTGGAACTCCTGTGTTTGAGGAGAGAC
ACACCAAAAGCGTTTGAAGATCCCATCGCACTTTTCGAAAAGAGTAGGGT
GTGAGTGGACCAAACCTTACAGTCTGGTCTTATAATGTATGCTTGTACCT
ACAGCACAAAACTAGACAAGTGTGTTATGCCCAAAGGTAAGTTTACCAAC
TTGATGAAGTGATTGACAGAAGGTCTTGTCTTGTCCACTACAGGGATGTA
TGGAAACTGCTGCGAGACTTTGACATACAGATGAAGGGGTGTGTGGACCT
CTCCAACCTGGCCAATCAGAATACTGGGAGTGCAGAAATCTGGAGCCTGG
ACAACCTCTGCAAACATGTGGTAACTTTGTACATCAATGATCGTCTTTGC
TCAGGGATATTTTGTTAACATTTCTACATTGCTTTTGTCAATCACCAATC
TCTTGGAATTCTTCATAATCACAGATGTAAGGTTTTAACTCTATTTCAAA
TGCTGTTCACTCCTGGCCAATTTCCTTGGTTCTTAGAGGTATCAGGCATT
GTTTTCATCATGCTGTTCCCGTTAATAAGCACATCTTATTTGATATGAGA
ACCAACACTTTGAATTGGTGTAGCCTTAGCATTATTCATAACGGTAACTT
CATACACTTCCAAAATAATTCACTGTCTGGTCGGTGATAAAATCTCTTCT
TAGTTCGCACATAATAAAGTGAACGACATCATATCTTCTCCACATATTGT
TAACCTTGAAATTTACAACTGGCATTTTCTAAAGGTGTGTCATTGATGAT
GTCATTAAAGGATGCTGTTGCTAAACATTAATCATAGATATTCTTTTATA
TTGAAGTGACCTTTATTTATTTATTTATTTATTTATTTATTGATGTTGTT
CTTGCTAAGTTGAAGCAACGACTGGACAAGGACCCAGGCGTCAGGAAGAG
TGACTGGAGACAGTACCCCCTCACAGCTACACAACAACAGTACGCAGCAG
CTGATGCTTATGTAGGTGCCACACTTTCCCAAATCATTACCTCCATGGAG
GTATTGTTTTCGGTGTCTGTTTGTTTGTCTGCTTGCTTGTCCATGCTGCC
GGAATATATATTTTCCATATGCTAGTCATGTTCATCACTGCAGAGTGACA
GGATGTGAAGTTCAGAGTTGCCAGAGCGACCAAAAGTGAAGTTTGTGTTC
TCACAGTAACTGTTAAATACATTTTCCATAATGTTACCCTGTGTCTTTGT
GTAAATTTGCTGTGCATCTGGTTATGATTAGGAAGTTCCAAACAACATCT
ATTTTTAGAACCAACCCACTTTGTTCTTTTTATTTCCAGGCTGGTCTTCT
TCTGTATAACAAGTTGACACAAACAACAGGTGACAAAAACACAAAGAATG
ATGTATCTACATAAAGACAATCAAAAAAATGAAATAGAGCATTCTATAAC
GTTAGCATCTTTCTGGCAAACAGAAAAGGAAAGTCAGCGAGGGAGCGACA
CTGAAGAGGGCCTGCACGGGGGGGTCCCAACAACGCTCTACGCTAAATTT
GGAGGGCCGGCTACGTAATACGCTAAATTCAGAAACCCC Coding sequence (CDS) from alignment at Sc0000000:3989249..3992937+ >BlTCONS00000567 ID=BlTCONS00000567|Name=BlTCONS00000567|organism=Branchiostoma lanceolatum|type=CDS|length=447bp|location=Sequence derived from alignment at Sc0000000:3989249..3992937+ (Branchiostoma lanceolatum)
TTCAAAATGGCGGAAGCAGACGAACAAGTTGACAGGGGCGGCTGTGGTGA
CTGTGGAAAGACTCAAAAACCGAAGAGAAGGTTGCCAGAATGGATGAAAG
ACATCGTTTTAGACAAGGATCATACTAAAAAGAAGAGAAAACAGGGAGGA
CCACAGAAAGGTCACACACCACTTGTCCTGAACCTCCCAGTCCTGAAGTT
CATAGGTAACGTGGTATACTGTTACCAGACAGGCGACTGTTCGTTCATGT
GTGAAGACATCATGAGTAACACAACAGATGAGCGCAGCTGTGTTCTGGGG
TTTGATATAGAGTGGCCAGTGACATACACAGCAGGGAAAGAAGAGAAGAC
AGCACTGCTCCAGCTCTGTCCCTCTCACAACAAGTGTTATCTCTTCCACC
TGTCTTGTATGGCTGGTATGCACATCAATGTTTTCCTGGTGGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000567-exon-Sc0000000-1564993656:3989249..3989366 | BlTCONS00000567-exon-Sc0000000-1564993656:3989249..3989366 | Branchiostoma lanceolatum | exon |
| BlTCONS00000567-exon-Sc0000000-1564993656:3990015..3990160 | BlTCONS00000567-exon-Sc0000000-1564993656:3990015..3990160 | Branchiostoma lanceolatum | exon |
| BlTCONS00000567-exon-Sc0000000-1564993656:3990558..3990723 | BlTCONS00000567-exon-Sc0000000-1564993656:3990558..3990723 | Branchiostoma lanceolatum | exon |
| BlTCONS00000567-exon-Sc0000000-1564993656:3991032..3991101 | BlTCONS00000567-exon-Sc0000000-1564993656:3991032..3991101 | Branchiostoma lanceolatum | exon |
| BlTCONS00000567-exon-Sc0000000-1564993656:3991592..3991718 | BlTCONS00000567-exon-Sc0000000-1564993656:3991592..3991718 | Branchiostoma lanceolatum | exon |
| BlTCONS00000567-exon-Sc0000000-1564993656:3992258..3992359 | BlTCONS00000567-exon-Sc0000000-1564993656:3992258..3992359 | Branchiostoma lanceolatum | exon |
| BlTCONS00000567-exon-Sc0000000-1564993656:3992688..3992937 | BlTCONS00000567-exon-Sc0000000-1564993656:3992688..3992937 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3989249..3992937 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000301 |
|
