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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3989243..3992937+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000566 ID=BlTCONS00000566|Name=BlTCONS00000566|organism=Branchiostoma lanceolatum|type=mRNA|length=3695bp|location=Sequence derived from alignment at Sc0000000:3989243..3992937+ (Branchiostoma lanceolatum)
CGGCTATTTCAAAATGGCGGAAGCAGACGAACAAGTTGACAGGGGCGGCT
GTGGTGACTGTGGAAAGACTCAAAAACCGAAGAGAAGGTTGCCAGAATGG
ATGAAAGACATCGTTTTAGACAAGGTTAAGAATTCTACCGTGCCTACTCT
ACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCT
ACTCTACTCTACTCTACTCTACTCTACTGTACACTACTCTACTCTACTCT
ACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCT
ACTCTACTGTACACTACTCTACTCTACTCTACTCTTGATCTTGATTTGGT
ACTGGGCAACACTCTACTAGTACTCTACTCTACTCTGCTCTGCTCTACTC
TACTCTACTCTACTCTACTCTACTCTACTCTACTCTTGATCTTGATTTGG
TACTGGGCAACACTCTACTCTACTCTACTCTACTCTACTCTACTCTTGAT
CTTGATTTGGTACTGGGCAACACTCTACTAGTACTCTACACTACTCTGCT
CTGCTCTGCTCTGCTCTTCTCTTCTCTGCTCTGCTCTGCTCTGCTCTGCT
CTGCTCTACTCTGCTCTACTACTCTGCTCTGCTCTGCTCTGCTCTGCTCT
GCTCTGCTCTGCTCTGCTCTACTCATAAATCGTTGGTCATCATACTTCAT
AGGGTCATACCAGTCAGCTAAAAACTATGGTAACCTTTATTCACAAATTA
TCCCTTTTATATCAATACTCAGGATCATACTAAAAAGAAGAGAAAACAGG
GAGGACCACAGAAAGGTCACACACCACTTGTCCTGAACCTCCCAGTCCTG
AAGTTCATAGGTAACGTGGTATACTGTTACCAGACAGGCGACTGTTCGTT
CATGTGTGAAGACATCATGTAAGTATATTCTCTTTGCCTTCTCTATTTTA
CTTGCAAACCTTGAACTTTTTTCAGTGGTCTTATTTTTGTTGTTATAAGT
GACCTCTCCACCACAGATTNGTTGTTATAAGTGACCTCTCCAGCACAGAT
TCATGACACCATACCATTATGAATATACGTTTCTAATGTATTACTGTACA
ACGTTAACAGAACTGTTTTGGCACCACAAAATAAAGCCTCCCATTTCTGT
TGTCGCGGCAAAGATAACTAAATCTACTGTATTAATGTCAAGTGATTGAT
AATCCAAAATCCTTATATGTTCAATCCTTATACATGTACCTCTTCCACAT
ACATGAAAATGATAATTCTTCATCTCCTTACAACTAGTCACTTGAATCAT
TATTATTATTTACAGGAGTAACACAACAGATGAGCGCAGCTGTGTTCTGG
GGTTTGATATAGAGTGGCCAGTGACATACACAGCAGGGAAAGAAGAGAAG
ACAGCACTGCTCCAGCTCTGTCCCTCTCACAACAAGTGTTATCTCTTCCA
CCTGTCTTGTATGGCTGGTATGCACATCAATGTAAAGTTATTTGCTTGTT
TGTTTGTTTGGAATATGGGTTGGTGGAAAGAGTGGTCCAGCCTGTATGGT
GGTAAACATGGTACAGTCCAGTCGGGGTGAAAAAACTGACATAACTCTTT
CTGCATGTGGTTGTGCCTTTTGGCAGAAATACTGGACTACTGGAATCTTT
CTACAAGTATGCATATAAACAAGACCTCCATAGCTAATGGTTATATACAC
TGTACATGTATTTCATGCCCAAATTTTCCATAGTTTTTTTCACTATGTGC
AGTAAAGGATATGTTTTCATTGGTCCTTGTCACATTCAGGTTTTCCTGGT
GGACTGAAGAAGCTTCTTGAGACTGAATCGATCAAAAAAGTTGGAGTTGG
CATCCAGGGGTGAGAAAGTATTTCTTATTGTTAGATCACAAATCAAGTTC
TGCTAAGATGTTAATTTTCCCAGACCTCCTCCCTGTGTTAAAGAAGAGTC
TCAAAATTCTCCAAAATTCTCCAATGACTTGCAAATCTAGGAAGGTGAAA
AGGTGGTCTTGTGTTTAGAGTTGTTGACTTTCTGGGTTTGAATCCCTAGG
CACGCAGGCAACTCTTGCACCTATTTCAGGTGAATATGACTAGTACCAAG
CTATGGTTAAGGATGACCTCTGCCATGGGGTGGAACTCCTGTGTTTGAGG
AGAGACACACCAAAAGCGTTTGAAGATCCCATCGCACTTTTCGAAAAGAG
TAGGGTGTGAGTGGACCAAACCTTACAGTCTGGTCTTATAATGTATGCTT
GTACCTACAGCACAAAACTAGACAAGTGTGTTATGCCCAAAGGTAAGTTT
ACCAACTTGATGAAGTGATTGACAGAAGGTCTTGTCTTGTCCACTACAGG
GATGTATGGAAACTGCTGCGAGACTTTGACATACAGATGAAGGGGTGTGT
GGACCTCTCCAACCTGGCCAATCAGAATACTGGGAGTGCAGAAATCTGGA
GCCTGGACAACCTCTGCAAACATGTGGTAACTTTGTACATCAATGATCGT
CTTTGCTCAGGGATATTTTGTTAACATTTCTACATTGCTTTTGTCAATCA
CCAATCTCTTGGAATTCTTCATAATCACAGATGTAAGGTTTTAACTCTAT
TTCAAATGCTGTTCACTCCTGGCCAATTTCCTTGGTTCTTAGAGGTATCA
GGCATTGTTTTCATCATGCTGTTCCCGTTAATAAGCACATCTTATTTGAT
ATGAGAACCAACACTTTGAATTGGTGTAGCCTTAGCATTATTCATAACGG
TAACTTCATACACTTCCAAAATAATTCACTGTCTGGTCGGTGATAAAATC
TCTTCTTAGTTCGCACATAATAAAGTGAACGACATCATATCTTCTCCACA
TATTGTTAACCTTGAAATTTACAACTGGCATTTTCTAAAGGTGTGTCATT
GATGATGTCATTAAAGGATGCTGTTGCTAAACATTAATCATAGATATTCT
TTTATATTGAAGTGACCTTTATTTATTTATTTATTTATTTATTTATTGAT
GTTGTTCTTGCTAAGTTGAAGCAACGACTGGACAAGGACCCAGGCGTCAG
GAAGAGTGACTGGAGACAGTACCCCCTCACAGCTACACAACAACAGTACG
CAGCAGCTGATGCTTATGTAGGTGCCACACTTTCCCAAATCATTACCTCC
ATGGAGGTATTGTTTTCGGTGTCTGTTTGTTTGTCTGCTTGCTTGTCCAT
GCTGCCGGAATATATATTTTCCATATGCTAGTCATGTTCATCACTGCAGA
GTGACAGGATGTGAAGTTCAGAGTTGCCAGAGCGACCAAAAGTGAAGTTT
GTGTTCTCACAGTAACTGTTAAATACATTTTCCATAATGTTACCCTGTGT
CTTTGTGTAAATTTGCTGTGCATCTGGTTATGATTAGGAAGTTCCAAACA
ACATCTATTTTTAGAACCAACCCACTTTGTTCTTTTTATTTCCAGGCTGG
TCTTCTTCTGTATAACAAGTTGACACAAACAACAGGTGACAAAAACACAA
AGAATGATGTATCTACATAAAGACAATCAAAAAAATGAAATAGAGCATTC
TATAACGTTAGCATCTTTCTGGCAAACAGAAAAGGAAAGTCAGCGAGGGA
GCGACACTGAAGAGGGCCTGCACGGGGGGGTCCCAACAACGCTCTACGCT
AAATTTGGAGGGCCGGCTACGTAATACGCTAAATTCAGAAACCCC Coding sequence (CDS) from alignment at Sc0000000:3989243..3992937+ >BlTCONS00000566 ID=BlTCONS00000566|Name=BlTCONS00000566|organism=Branchiostoma lanceolatum|type=CDS|length=792bp|location=Sequence derived from alignment at Sc0000000:3989243..3992937+ (Branchiostoma lanceolatum)
GGCTATTTCAAAATGGCGGAAGCAGACGAACAAGTTGACAGGGGCGGCTG
TGGTGACTGTGGAAAGACTCAAAAACCGAAGAGAAGGTTGCCAGAATGGA
TGAAAGACATCGTTTTAGACAAGGATCATACTAAAAAGAAGAGAAAACAG
GGAGGACCACAGAAAGGTCACACACCACTTGTCCTGAACCTCCCAGTCCT
GAAGTTCATAGGTAACGTGGTATACTGTTACCAGACAGGCGACTGTTCGT
TCATGTGTGAAGACATCATTAACACAACAGATGAGCGCAGCTGTGTTCTG
GGGTTTGATATAGAGTGGCCAGTGACATACACAGCAGGGAAAGAAGAGAA
GACAGCACTGCTCCAGCTCTGTCCCTCTCACAACAAGTGTTATCTCTTCC
ACCTGTCTTGTATGGCTGGTTTTCCTGGTGGACTGAAGAAGCTTCTTGAG
ACTGAATCGATCAAAAAAGTTGGAGTTGGCATCCAGGGGGATGTATGGAA
ACTGCTGCGAGACTTTGACATACAGATGAAGGGGTGTGTGGACCTCTCCA
ACCTGGCCAATCAGAATACTGGGAGTGCAGAAATCTGGAGCCTGGACAAC
CTCTGCAAACATGTGTTGAAGCAACGACTGGACAAGGACCCAGGCGTCAG
GAAGAGTGACTGGAGACAGTACCCCCTCACAGCTACACAACAACAGTACG
CAGCAGCTGATGCTTATGCTGGTCTTCTTCTGTATAACAAGTTGACACAA
ACAACAGGTGACAAAAACACAAAGAATGATGTATCTACATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000566-exon-Sc0000000-1564993656:3989243..3989366 | BlTCONS00000566-exon-Sc0000000-1564993656:3989243..3989366 | Branchiostoma lanceolatum | exon |
| BlTCONS00000566-exon-Sc0000000-1564993656:3990015..3990160 | BlTCONS00000566-exon-Sc0000000-1564993656:3990015..3990160 | Branchiostoma lanceolatum | exon |
| BlTCONS00000566-exon-Sc0000000-1564993656:3990561..3990709 | BlTCONS00000566-exon-Sc0000000-1564993656:3990561..3990709 | Branchiostoma lanceolatum | exon |
| BlTCONS00000566-exon-Sc0000000-1564993656:3991032..3991101 | BlTCONS00000566-exon-Sc0000000-1564993656:3991032..3991101 | Branchiostoma lanceolatum | exon |
| BlTCONS00000566-exon-Sc0000000-1564993656:3991592..3991718 | BlTCONS00000566-exon-Sc0000000-1564993656:3991592..3991718 | Branchiostoma lanceolatum | exon |
| BlTCONS00000566-exon-Sc0000000-1564993656:3992258..3992359 | BlTCONS00000566-exon-Sc0000000-1564993656:3992258..3992359 | Branchiostoma lanceolatum | exon |
| BlTCONS00000566-exon-Sc0000000-1564993656:3992688..3992937 | BlTCONS00000566-exon-Sc0000000-1564993656:3992688..3992937 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3989243..3992937 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000301 |
|
