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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3956263..3960121+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000559 ID=BlTCONS00000559|Name=BlTCONS00000559|organism=Branchiostoma lanceolatum|type=mRNA|length=3859bp|location=Sequence derived from alignment at Sc0000000:3956263..3960121+ (Branchiostoma lanceolatum)
GCCGAAAGTCAAGTCCAGCCAGTCACATGCGTCCTACGACAACTCGACAA
AGCTGGAGATTCTTGAGACCCAGAGAAGAAAGCAGTGGAGCAACAGAAAA
GCCGCCAAACACTTCGGCGTGGCCGAGGGCTCCATCCGGAAGTGGAAGCG
GGTCGAGGAGCAGCTTGCCGCCGCGCCAACGTCACGCAAGAGGCTGTCCG
GAGGAGGTCAGAAGGTCAAGAACCCCGAACTTGACCGTACATTGATAGAA
TGGATAGACGTTCAGCAAAGAGAAGGAGTCCCCGTGAATGGAGCAATGAT
CAAGGACGAAGCCAGGAGGATTTCAGGCGGCGACGACTCGTTCAAAGCGT
CTAACGGCTGGTTGGGGGGTCTGAAGAAGAGGCATGGGCTGATGAGCACC
AAGAGAGGGAAGACTGGGACCGTGGTTTGTGTGGTACAACAGGAGCCGAA
GGACAAGGTAACGGATTTTCTAAGATACTCCTGGACACCATTCGTTTGAG
GTTTCCTCCCTGGCTGAATTTGCATTTTCACTGATAATCTGATAAAGAAA
GAACTGTAGTTGTAATGAATATTGATAGCTGGGTATGAAAGAATTCCAAA
GATGATGCAGGGGGACTGCATGGGCCGTTTTATTGAAGGCGTATGAAGGC
CGTTAAAGAACTCACGAAAGGATTATTGTTTTTACATGTAGATAGCTTCG
GTGGATATTTGCATAATTTGATCGAGGCTGATAATGCACATCAGGACCTA
ATGATAATGATAATAATGATAATGAAGAATGAAGACCTATAAGTACGTTT
TATCATTCCGCTGACTTCCATGATAGGACTTCCAAAAAATTACATCCTGT
GAATATTTGTAATGTGGATGGAGAACATTATCGTCAGATTTAATTTGATA
CAGATAAGGAGATTATTTACATGTCTAACACGAAACGCCTATAATGGTTT
AGCAGTAAATGATGAGGTCTTCATATCAAGTTGTGACATTTGCTACATCA
TATATGAATTACGCAACGTAGGGCATACGTCGCCTGGGTGTTCTTTAACG
GCCTTTCTAACATTGTTTTCAGTCAGTCGAAGAAGCGTCTGAAGTCAAGT
CCAGTCAACTTCATGCGTCCTACAACAACTCGAGAAAGCTGGAGATTCTT
GAGATCCAGAGAAGAAAGCAGTGGAGCAACAGAAAAGCCGCCAAACACTT
CGGCGTGGCCGAGGGCTCCATCCGGAAGTGGAAGCGGGTCGAGGAGCAGC
TTGCCGCCGCGCCAACGTCACGCAAGAGGCTGTCCGGAGGAGGTCAGAAG
GTCAAGAACCCCGAACTTGACCGTACATTGATAGAATGGATAGACGTTCA
GCAAAGAGAAGGAGTCCCCGTGAATGGAGCAATGATCAAGGACGAAGCCA
GGAGGATTTCAGGCGGCGACGACTCGTTCAAAGCGTCTAACGGCTGGTTG
GGGGGTCTGAAGAAGAGGCATGGGCTGATGAGCACCAAGAGAGGGAAGAC
TGGGACCGTGGTTTGTGTGGTACAACAGGAGCCGAAGGACAAGGTAACGG
ATTTTCTAAGATACTCCTGGACACCATTCGTTTGAGGTTTCCTCCCTGGC
TGAATTTGCATTTTCACTGATAATCTGATAAAGAAAGAACTGTAGTTGTA
ATGAATATTGATAGCTGGGTATGAAAGAATTCCAAAGATGATGCAGGGGG
ACTGCATGGGCCGTTTTATTGAAGGCGTATGAAGGCCGTTAAAGAACTCA
CGAAAGGATTATTGTTTTTACATGTAGATAGCTTCGGTGGATATTTGCAT
AATTTGATCGAGGCTGATAATGCACATCAGGACCTAATGATAATGATAAT
AATGATAATGAAGAATGAAGACCTATAAGTACGTTTTATCATTCCGCTGA
CTTCCATGATAGGACTTCCAAAAAATTACATCCTGTGAATATTTGTAATG
TGGATGGAGAACATTATCGTCAGATTTAATTTGATACAGATAAGGAGATT
ATTTACATGTCTAACACGAAACGCCTATAATGGTTTAGCAGTAAATGATG
AGGTCTTCATATCAAGTTGTGACATTTGCTACATCATATATGAATTACGC
AACGTAGGGCATACGTCGCCTGGGTGTTCTTTAACGGCCTTTCTAACATT
GTTTTCAGTCAGTCGAAGAAGCGTCTGAAGTCAAGTCCAGTCAACTTCAT
GCGTCCTACAACAACTCGAGAAAGCTGGAGATTCTTGAGATCCAGAGAAG
AAAGCAGTGGAGCAACAGAAAAGCCGCCAAACACTTCGGCGTGGCCGAGG
GGTCCATCCGGAAGTGGAGGCGGGTCGAAGAGCAGCTCNGAGCAGCTTGC
CGCCGCGCCAACGTCACGCAAGAGGCTGTCCGGAGGAGGTCAGAAGGTCA
AGAACCCCGAACTTGACCGTACATTGATAGAATGGATAGACGTTCAGCAA
AGAGAAGGAGTCCCCGTGAATGGAGCAATGATCAAGGACGAAGCCAGGAG
GATTTCAGGCGGTGACGACTCGTTCAAAGCGTCTAACGGCTGGTTGGGGG
GTCTGAAGAAGAGGCATGGGCTGAGGAGCACCAAGAGAGGAAAGACTGGG
TCCCTGTTTCGTGTGGTACCACAGGGCATTGAGGACAGTGGGCATGATTC
TAATGAACCTATAGTGTGGAGCGTGGCATCGTGTGGTGTCATGGTTAGGG
CGACTGAGAATGTGATGGGTTCAAGCACCTGAGATGCCCCGATGGCGTAC
TCTGTTATGTGCAACGCTGACACTGTTCGAACGTTCATGTTAACAATCTA
AAAGACTAATCGTCAACCTCTCCCAAATAGGTGTAATTTGGTCAAACATT
CGTACAATAAACCTCTTTTTCTGAAGTGGCCTTTAGAGTAGGCTCCGTTG
CAGGCTCTGAACCGGCTTTTTAGGGGGCTAAATAATACACTTTTTGCAGC
CAGTATCAGCCAACCCCGTAACTATCAGCCGGCAAAAGTGTATTATTTAG
CCCCCAAAAAGCCGGTTCAGAGCCTGCAACGGAGGCTACCTTTAGAGGAC
AAATGCACCGAGGAGTTTGTATTCTGTTCTTTCTTTCATTCATGTGTTGT
TGTTTTTTCATGGTAAAATATAGCAATGTGCTGGACGGAATCGCAGCATT
GTTCCATTATAAAAATGTACAAGTATAAGGGTGGGCTTCCCGAACTGAAC
TCATCCTAAAGAAAGCTCAAAAGTAAAGCTGAATCAAAACGATATAGATG
GTATGCAAAGAAGAGAGATCATTCAAGAAAAGATGGTGGACAGCCCCTTC
AGCTTTTGAATTGGAATGGCTATATACGAATGAGTCTGTGTGTGATTCTT
TGTACTGTGTGTGGACTATTAACAAAGAGTGTGTTTAGTGTACGTTTGTG
TGCTTACAACACTACAGTGAGTGATTTCAACAAAAGCTTGGTGGCCTACT
GTTTCTGTTGTGATGAGTTGATGGCAAGAATTCATCGCGAACATAAAACC
ATCGCGACAATTTCACGGTTTACAGTAGTACCGTACGCATAGCTTGTACG
CGCGTTCTGTATATTTAGTCAAATGGCCCCAGGACTGGATTCCCGGTGTG
CTCCAATGGATGAACACACAGCTCTACCTGTCCTACATTAGATACCGTAC
AACAACTATGTTTCCACGCAGCTAAGTACTACAAACAAACAAACAAACAA
ACAAACAAACAAATTAAACTTTTTACTGAATTAATCGCTTGAATCCATGT
GCCACAGCCCTATCCGGTCGAATTATTGAATTGCCTTCTTATATATTTTC
ATTGAATACAGTTCCTTTGTGTGTAAGTTTTCTTATTGACTAAGAGAAGA
CGATCATGC Coding sequence (CDS) from alignment at Sc0000000:3956263..3960121+ >BlTCONS00000559 ID=BlTCONS00000559|Name=BlTCONS00000559|organism=Branchiostoma lanceolatum|type=CDS|length=714bp|location=Sequence derived from alignment at Sc0000000:3956263..3960121+ (Branchiostoma lanceolatum)
CCGAAAGTCAAGTCCAGCCAGTCACATGCGTCCTACGACAACTCGACAAA
GCTGGAGATTCTTGAGACCCAGAGAAGAAAGCAGTGGAGCAACAGAAAAG
CCGCCAAACACTTCGGCGTGGCCGAGGGCTCCATCCGGAAGTGGAAGCGG
GTCGAGGAGCAGCTTGCCGCCGCGCCAACGTCACGCAAGAGGCTGTCCGG
AGGAGGTCAGAAGGTCAAGAACCCCGAACTTGACCGTACATTGATAGAAT
GGATAGACGTTCAGCAAAGAGAAGGAGTCCCCGTGAATGGAGCAATGATC
AAGGACGAAGCCAGGAGGATTTCAGGCGGCGACGACTCGTTCAAAGCGTC
TAACGGCTGGTTGGGGGGTCTGAAGAAGAGGCATGGGCTGATGAGCACCA
AGAGAGGGAAGACTGGGACCGTGGTTTGTGTGGTACAACAGGAGCCGAAG
GACAAGTCAGTCGAAGAAGCGTCTGAAGTCAAGTCCAGTCAACTTCATGC
GTCCTACAACAACTCGAGAAAGCTGGAGATTCTTGAGATCCAGAGAAGAA
AGCAGTGGAGCAACAGAAAAGCCGCCAAACACTTCGGCGTGGCCGAGGGG
TCCATCCGGAAGTGGAGGCGGGTCGAAGAGCAGCTCNGAGCAGCTTGCCG
CCGCGCCAACGTCACGCAAGAGGCTGTCCGGAGGAGGTCAGAAGGTCAAG
AACCCCGAACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000559-exon-Sc0000000-1564993656:3956263..3956643 | BlTCONS00000559-exon-Sc0000000-1564993656:3956263..3956643 | Branchiostoma lanceolatum | exon |
| BlTCONS00000559-exon-Sc0000000-1564993656:3957730..3957805 | BlTCONS00000559-exon-Sc0000000-1564993656:3957730..3957805 | Branchiostoma lanceolatum | exon |
| BlTCONS00000559-exon-Sc0000000-1564993656:3958421..3960121 | BlTCONS00000559-exon-Sc0000000-1564993656:3958421..3960121 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3956263..3960121 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000297 |
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