BlTCONS00000556 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000556
Unique NameBlTCONS00000556
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:3956239..3957653+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000556 ID=BlTCONS00000556|Name=BlTCONS00000556|organism=Branchiostoma lanceolatum|type=mRNA|length=1415bp|location=Sequence derived from alignment at Sc0000000:3956239..3957653+ (Branchiostoma lanceolatum)
TGTTTTCATTCTGTTTGAAGAAATGCCGAAAGTCAAGTCCAGCCAGTCAC ATGCGTCCTACGACAACTCGACAAAGCTGGAGATTCTTGAGACCCAGAGA AGAAAGCAGTGGAGCAACAGAAAAGCCGCCAAACACTTCGGCGTGGCCGA GGGCTCCATCCGGAAGTGGAAGCGGGTCGAGGAGCAGCTTGCCGCCGCGC CAACGTCACGCAAGAGGCTGTCCGGAGGAGGTCAGAAGGTCAAGAACCCC GAACTTGACCGTACATTGATAGAATGGATAGACGTTCAGCAAAGAGAAGG AGTCCCCGTGAATGGAGCAATGATCAAGGACGAAGCCAGGAGGATTTCAG GCGGCGACGACTCGTTCAAAGCGTCTAACGGCTGGTTGGGGGGTCTGAAG AAGAGGCATGGGCTGATGAGCACCAAGAGAGGGAAGACTGGGACCGTGGT TTGTGTGGTACAACAGGAGCCGAAGGACAAGGTAACGGATTTTCTAAGAT ACTCCTGGACACCATTCGTTTGAGGTTTCCTCCCTGGCTGAATTTGCATT TTCACTGATAATCTGATAAAGAAAGAACTGTAGTTGTAATGAATATTGAT AGCTGGGTATGAAAGAATTCCAAAGATGATGCAGGGGGACTGCATGGGCC GTTTTATTGAAGGCGTATGAAGGCCGTTAAAGAACTCACGAAAGGATTAT TGTTTTTACATGTAGATAGCTTCGGTGGATATTTGCATAATTTGATCGAG GCTGATAATGCACATCAGGACCTAATGATAATGATAATAATGATAATGAA GAATGAAGACCTATAAGTACGTTTTATCATTCCGCTGACTTCCATGATAG GACTTCCAAAAAATTACATCCTGTGAATATTTGTAATGTGGATGGAGAAC ATTATCGTCAGATTTAATTTGATACAGATAAGGAGATTATTTACATGTCT AACACGAAACGCCTATAATGGTTTAGCAGTAAATGATGAGGTCTTCATAT CAAGTTGTGACATTTGCTACATCATATATGAATTACGCAACGTAGGGCAT ACGTCGCCTGGGTGTTCTTTAACGGCCTTTCTAACATTGTTTTCAGTCAG TCGAAGAAGCGTCTGAAGTCAAGTCCAGTCAACTTCATGCGTCCTACAAC AACTCGAGAAAGCTGGAGATTCTTGAGATCCAGAGAAGAAAGCAGTGGAG CAACAGAAAAGCCGCCAAACACTTCGGCGTGGCCGAGGGCTCCATCCGGA AGTGGAAGCGGGTCGAGGAGCAGCTTGCCGCCGCGCCAACGTCACGCAAG AGGCTGTCCGGAGGAGGTCAGAAGGTCAAGAACCCCGAACTTGACCGTAC ATTGATAGAATGGATAGACGTTCAGCAAAGAGAAGGAGTCCCCGTGAATG GAGCAATGATCAAGG

Coding sequence (CDS) from alignment at Sc0000000:3956239..3957653+

>BlTCONS00000556 ID=BlTCONS00000556|Name=BlTCONS00000556|organism=Branchiostoma lanceolatum|type=CDS|length=327bp|location=Sequence derived from alignment at Sc0000000:3956239..3957653+ (Branchiostoma lanceolatum)
GTTTTCATTCTGTTTGAAGAAATGCCGAAAGTCAAGTCCAGCCAGTCACA
TGCGTCCTACGACAACTCGACAAAGCTGGAGATTCTTGAGACCCAGAGAA
GAAAGCAGTGGAGCAACAGAAAAGCCGCCAAACACTTCGGCGTGGCCGAG
GGCTCCATCCGGAAGTGGAAGCGGGTCGAGGAGCAGCTTGCCGCCGCGCC
AACGTCACGCAAGAGGCTGTCCGGAGGAGGTCAGAAGGTCAAGAACCCCG
AACTTGACCGTACATTGATAGAATGGATAGACGTTCAGCAAAGAGAAGGA
GTCCCCGTGAATGGAGCAATGATCAAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000556-exon-Sc0000000-1564993656:3956239..3956502BlTCONS00000556-exon-Sc0000000-1564993656:3956239..3956502Branchiostoma lanceolatumexon
BlTCONS00000556-exon-Sc0000000-1564993656:3957589..3957653BlTCONS00000556-exon-Sc0000000-1564993656:3957589..3957653Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000556BlTCONS00000556-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:3956239..3957653 +
Properties
Property NameValue
GeneIDBlCUFF000297