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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3955981..3960121+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000553 ID=BlTCONS00000553|Name=BlTCONS00000553|organism=Branchiostoma lanceolatum|type=mRNA|length=4141bp|location=Sequence derived from alignment at Sc0000000:3955981..3960121+ (Branchiostoma lanceolatum)
GCGCATTACACTTAGGGTAGGTAACCAGAGCCACACCAAAATAGGTACGT
AGTACGATCATTTGTTCCTATCTGAGATAGTTTTCGACGATTCTGAGGGT
ATAAGATACATATAAGAGTATCCAAGAAAGTCATGGAGTTTTCTAGTGTT
CAGGAATGAAACAGTTTGTGCGTTCTTGTCCGAAATATATCTGGCGGCGA
CAGGGGGGAGGGGGGCGTCTTGTGTACGGAAACGTTATTTTGTCAAAATC
TTGATCATTGTTTTCATTCTGTTTGAAGAAATGCCGAAAGTCAAGTCCAG
CCAGTCACATGCGTCCTACGACAACTCGACAAAGCTGGAGATTCTTGAGA
CCCAGAGAAGAAAGCAGTGGAGCAACAGAAAAGCCGCCAAACACTTCGGC
GTGGCCGAGGGCTCCATCCGGAAGTGGAAGCGGGTCGAGGAGCAGCTTGC
CGCCGCGCCAACGTCACGCAAGAGGCTGTCCGGAGGAGGTCAGAAGGTCA
AGAACCCCGAACTTGACCGTACATTGATAGAATGGATAGACGTTCAGCAA
AGAGAAGGAGTCCCCGTGAATGGAGCAATGATCAAGGACGAAGCCAGGAG
GATTTCAGGCGGCGACGACTCGTTCAAAGCGTCTAACGGCTGGTTGGGGG
GTCTGAAGAAGAGGCATGGGCTGATGAGCACCAAGAGAGGGAAGACTGGG
ACCGTGGTTTGTGTGGTACAACAGGAGCCGAAGGACAAGGTAACGGATTT
TCTAAGATACTCCTGGACACCATTCGTTTGAGGTTTCCTCCCTGGCTGAA
TTTGCATTTTCACTGATAATCTGATAAAGAAAGAACTGTAGTTGTAATGA
ATATTGATAGCTGGGTATGAAAGAATTCCAAAGATGATGCAGGGGGACTG
CATGGGCCGTTTTATTGAAGGCGTATGAAGGCCGTTAAAGAACTCACGAA
AGGATTATTGTTTTTACATGTAGATAGCTTCGGTGGATATTTGCATAATT
TGATCGAGGCTGATAATGCACATCAGGACCTAATGATAATGATAATAATG
ATAATGAAGAATGAAGACCTATAAGTACGTTTTATCATTCCGCTGACTTC
CATGATAGGACTTCCAAAAAATTACATCCTGTGAATATTTGTAATGTGGA
TGGAGAACATTATCGTCAGATTTAATTTGATACAGATAAGGAGATTATTT
ACATGTCTAACACGAAACGCCTATAATGGTTTAGCAGTAAATGATGAGGT
CTTCATATCAAGTTGTGACATTTGCTACATCATATATGAATTACGCAACG
TAGGGCATACGTCGCCTGGGTGTTCTTTAACGGCCTTTCTAACATTGTTT
TCAGTCAGTCGAAGAAGCGTCTGAAGTCAAGTCCAGTCAACTTCATGCGT
CCTACAACAACTCGAGAAAGCTGGAGATTCTTGAGATCCAGAGAAGAAAG
CAGTGGAGCAACAGAAAAGCCGCCAAACACTTCGGCGTGGCCGAGGGCTC
CATCCGGAAGTGGAAGCGGGTCGAGGAGCAGCTTGCCGCCGCGCCAACGT
CACGCAAGAGGCTGTCCGGAGGAGGTCAGAAGGTCAAGAACCCCGAACTT
GACCGTACATTGATAGAATGGATAGACGTTCAGCAAAGAGAAGGAGTCCC
CGTGAATGGAGCAATGATCAAGGACGAAGCCAGGAGGATTTCAGGCGGCG
ACGACTCGTTCAAAGCGTCTAACGGCTGGTTGGGGGGTCTGAAGAAGAGG
CATGGGCTGATGAGCACCAAGAGAGGGAAGACTGGGACCGTGGTTTGTGT
GGTACAACAGGAGCCGAAGGACAAGGTAACGGATTTTCTAAGATACTCCT
GGACACCATTCGTTTGAGGTTTCCTCCCTGGCTGAATTTGCATTTTCACT
GATAATCTGATAAAGAAAGAACTGTAGTTGTAATGAATATTGATAGCTGG
GTATGAAAGAATTCCAAAGATGATGCAGGGGGACTGCATGGGCCGTTTTA
TTGAAGGCGTATGAAGGCCGTTAAAGAACTCACGAAAGGATTATTGTTTT
TACATGTAGATAGCTTCGGTGGATATTTGCATAATTTGATCGAGGCTGAT
AATGCACATCAGGACCTAATGATAATGATAATAATGATAATGAAGAATGA
AGACCTATAAGTACGTTTTATCATTCCGCTGACTTCCATGATAGGACTTC
CAAAAAATTACATCCTGTGAATATTTGTAATGTGGATGGAGAACATTATC
GTCAGATTTAATTTGATACAGATAAGGAGATTATTTACATGTCTAACACG
AAACGCCTATAATGGTTTAGCAGTAAATGATGAGGTCTTCATATCAAGTT
GTGACATTTGCTACATCATATATGAATTACGCAACGTAGGGCATACGTCG
CCTGGGTGTTCTTTAACGGCCTTTCTAACATTGTTTTCAGTCAGTCGAAG
AAGCGTCTGAAGTCAAGTCCAGTCAACTTCATGCGTCCTACAACAACTCG
AGAAAGCTGGAGATTCTTGAGATCCAGAGAAGAAAGCAGTGGAGCAACAG
AAAAGCCGCCAAACACTTCGGCGTGGCCGAGGGGTCCATCCGGAAGTGGA
GGCGGGTCGAAGAGCAGCTCNGAGCAGCTTGCCGCCGCGCCAACGTCACG
CAAGAGGCTGTCCGGAGGAGGTCAGAAGGTCAAGAACCCCGAACTTGACC
GTACATTGATAGAATGGATAGACGTTCAGCAAAGAGAAGGAGTCCCCGTG
AATGGAGCAATGATCAAGGACGAAGCCAGGAGGATTTCAGGCGGTGACGA
CTCGTTCAAAGCGTCTAACGGCTGGTTGGGGGGTCTGAAGAAGAGGCATG
GGCTGAGGAGCACCAAGAGAGGAAAGACTGGGTCCCTGTTTCGTGTGGTA
CCACAGGGCATTGAGGACAGTGGGCATGATTCTAATGAACCTATAGTGTG
GAGCGTGGCATCGTGTGGTGTCATGGTTAGGGCGACTGAGAATGTGATGG
GTTCAAGCACCTGAGATGCCCCGATGGCGTACTCTGTTATGTGCAACGCT
GACACTGTTCGAACGTTCATGTTAACAATCTAAAAGACTAATCGTCAACC
TCTCCCAAATAGGTGTAATTTGGTCAAACATTCGTACAATAAACCTCTTT
TTCTGAAGTGGCCTTTAGAGTAGGCTCCGTTGCAGGCTCTGAACCGGCTT
TTTAGGGGGCTAAATAATACACTTTTTGCAGCCAGTATCAGCCAACCCCG
TAACTATCAGCCGGCAAAAGTGTATTATTTAGCCCCCAAAAAGCCGGTTC
AGAGCCTGCAACGGAGGCTACCTTTAGAGGACAAATGCACCGAGGAGTTT
GTATTCTGTTCTTTCTTTCATTCATGTGTTGTTGTTTTTTCATGGTAAAA
TATAGCAATGTGCTGGACGGAATCGCAGCATTGTTCCATTATAAAAATGT
ACAAGTATAAGGGTGGGCTTCCCGAACTGAACTCATCCTAAAGAAAGCTC
AAAAGTAAAGCTGAATCAAAACGATATAGATGGTATGCAAAGAAGAGAGA
TCATTCAAGAAAAGATGGTGGACAGCCCCTTCAGCTTTTGAATTGGAATG
GCTATATACGAATGAGTCTGTGTGTGATTCTTTGTACTGTGTGTGGACTA
TTAACAAAGAGTGTGTTTAGTGTACGTTTGTGTGCTTACAACACTACAGT
GAGTGATTTCAACAAAAGCTTGGTGGCCTACTGTTTCTGTTGTGATGAGT
TGATGGCAAGAATTCATCGCGAACATAAAACCATCGCGACAATTTCACGG
TTTACAGTAGTACCGTACGCATAGCTTGTACGCGCGTTCTGTATATTTAG
TCAAATGGCCCCAGGACTGGATTCCCGGTGTGCTCCAATGGATGAACACA
CAGCTCTACCTGTCCTACATTAGATACCGTACAACAACTATGTTTCCACG
CAGCTAAGTACTACAAACAAACAAACAAACAAACAAACAAACAAATTAAA
CTTTTTACTGAATTAATCGCTTGAATCCATGTGCCACAGCCCTATCCGGT
CGAATTATTGAATTGCCTTCTTATATATTTTCATTGAATACAGTTCCTTT
GTGTGTAAGTTTTCTTATTGACTAAGAGAAGACGATCATGC Coding sequence (CDS) from alignment at Sc0000000:3955981..3960121+ >BlTCONS00000553 ID=BlTCONS00000553|Name=BlTCONS00000553|organism=Branchiostoma lanceolatum|type=CDS|length=1233bp|location=Sequence derived from alignment at Sc0000000:3955981..3960121+ (Branchiostoma lanceolatum)
CGCATTACACTTAGGGTAGGTAACCAGAGCCACACCAAAATAGAAATGCC
GAAAGTCAAGTCCAGCCAGTCACATGCGTCCTACGACAACTCGACAAAGC
TGGAGATTCTTGAGACCCAGAGAAGAAAGCAGTGGAGCAACAGAAAAGCC
GCCAAACACTTCGGCGTGGCCGAGGGCTCCATCCGGAAGTGGAAGCGGGT
CGAGGAGCAGCTTGCCGCCGCGCCAACGTCACGCAAGAGGCTGTCCGGAG
GAGGTCAGAAGGTCAAGAACCCCGAACTTGACCGTACATTGATAGAATGG
ATAGACGTTCAGCAAAGAGAAGGAGTCCCCGTGAATGGAGCAATGATCAA
GGACGAAGCCAGGAGGATTTCAGGCGGCGACGACTCGTTCAAAGCGTCTA
ACGGCTGGTTGGGGGGTCTGAAGAAGAGGCATGGGCTGATGAGCACCAAG
AGAGGGAAGACTGGGACCGTGGTTTGTGTGGTACAACAGGAGCCGAAGGA
CAAGTCAGTCGAAGAAGCGTCTGAAGTCAAGTCCAGTCAACTTCATGCGT
CCTACAACAACTCGAGAAAGCTGGAGATTCTTGAGATCCAGAGAAGAAAG
CAGTGGAGCAACAGAAAAGCCGCCAAACACTTCGGCGTGGCCGAGGGCTC
CATCCGGAAGTGGAAGCGGGTCGAGGAGCAGCTTGCCGCCGCGCCAACGT
CACGCAAGAGGCTGTCCGGAGGAGGTCAGAAGGTCAAGAACCCCGAACTT
GACCGTACATTGATAGAATGGATAGACGTTCAGCAAAGAGAAGGAGTCCC
CGTGAATGGAGCAATGATCAAGGACGAAGCCAGGAGGATTTCAGGCGGCG
ACGACTCGTTCAAAGCGTCTAACGGCTGGTTGGGGGGTCTGAAGAAGAGG
CATGGGCTGATGAGCACCAAGAGAGGGAAGACTGGGACCGTGGTTTGTGT
GGTACAACAGGAGCCGAAGGACAAGTCAGTCGAAGAAGCGTCTGAAGTCA
AGTCCAGTCAACTTCATGCGTCCTACAACAACTCGAGAAAGCTGGAGATT
CTTGAGATCCAGAGAAGAAAGCAGTGGAGCAACAGAAAAGCCGCCAAACA
CTTCGGCGTGGCCGAGGGGTCCATCCGGAAGTGGAGGCGGGTCGAAGAGC
AGCTCNGAGCAGCTTGCCGCCGCGCCAACGTCACGCAAGAGGCTGTCCGG
AGGAGGTCAGAAGGTCAAGAACCCCGAACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000553-exon-Sc0000000-1564993656:3955981..3956024 | BlTCONS00000553-exon-Sc0000000-1564993656:3955981..3956024 | Branchiostoma lanceolatum | exon |
| BlTCONS00000553-exon-Sc0000000-1564993656:3956259..3956719 | BlTCONS00000553-exon-Sc0000000-1564993656:3956259..3956719 | Branchiostoma lanceolatum | exon |
| BlTCONS00000553-exon-Sc0000000-1564993656:3957335..3957805 | BlTCONS00000553-exon-Sc0000000-1564993656:3957335..3957805 | Branchiostoma lanceolatum | exon |
| BlTCONS00000553-exon-Sc0000000-1564993656:3958421..3960121 | BlTCONS00000553-exon-Sc0000000-1564993656:3958421..3960121 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3955981..3960121 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000297 |
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