BlTCONS00000549 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000549
Unique NameBlTCONS00000549
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:3952660..3953439+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000549 ID=BlTCONS00000549|Name=BlTCONS00000549|organism=Branchiostoma lanceolatum|type=mRNA|length=780bp|location=Sequence derived from alignment at Sc0000000:3952660..3953439+ (Branchiostoma lanceolatum)
AGAAACAGAAGCCCGTGGCGTCAACTCACGGACAGAGAAGATCGTCTTTG GCGGAACAGGTTCAGACCCGGGAATGTTTGGGGATAACCGCGCAGTGGCT GTGTCTGCCGACAATGAGGTTTTTGTGACCGATAAGTACAACAAACGAGT CCAAGTCTTCAACATCAATGGGGTCTTTCTCCGCCTCTTACCAACTTTTC TGCAAGCTAAAAGCGAGCAGAAAATACATCCTTACGATGTATCCATTGGC GGAGAGGGTCATCTGTGGGTGGTGGGACGGAAACTACGTGCTTATGACGA CCCTGTACATGTGGTGCAGTACAGCCAGGGCGGCCTACCACTGACCAACT TCGGCGTTCCGGACGCTACTTGGTCACCAGGCGTTGGCATGGCGGTAGAC GTGCGCAATGACAAAATCATCGTCATCCTGAATGAGGAAATTCTGATGTT CCAACCAAACGGCTCGTTCTACAGGAGTATTGGAAAGGGACGCCATCAAT TCGTATATGTCACACCAGACAATAGAGGGAGGATCCTTGTGACGGACTAT TCATGCAGCAATGTCCAGGTGTTCGACTACTCCGGACACAGGCTATCCGG AGTCGGAGGCTATGGACGCAGCGACGGCGAGCTGATTCGTCCCAGAGGCG TTTGCATAGACAGCTCGGGTCACGTCATCGTAGCAAACGCTGGGAACGGG CGGGTAGACATGTTCACAAGCCGCGGGGAGTTTGTCCGTACTGTCGTTGA TATGGAAAACCCGTGGGGCATCGCTGTGGG

Coding sequence (CDS) from alignment at Sc0000000:3952660..3953439+

>BlTCONS00000549 ID=BlTCONS00000549|Name=BlTCONS00000549|organism=Branchiostoma lanceolatum|type=CDS|length=777bp|location=Sequence derived from alignment at Sc0000000:3952660..3953439+ (Branchiostoma lanceolatum)
GAAACAGAAGCCCGTGGCGTCAACTCACGGACAGAGAAGATCGTCTTTGG
CGGAACAGGTTCAGACCCGGGAATGTTTGGGGATAACCGCGCAGTGGCTG
TGTCTGCCGACAATGAGGTTTTTGTGACCGATAAGTACAACAAACGAGTC
CAAGTCTTCAACATCAATGGGGTCTTTCTCCGCCTCTTACCAACTTTTCT
GCAAGCTAAAAGCGAGCAGAAAATACATCCTTACGATGTATCCATTGGCG
GAGAGGGTCATCTGTGGGTGGTGGGACGGAAACTACGTGCTTATGACGAC
CCTGTACATGTGGTGCAGTACAGCCAGGGCGGCCTACCACTGACCAACTT
CGGCGTTCCGGACGCTACTTGGTCACCAGGCGTTGGCATGGCGGTAGACG
TGCGCAATGACAAAATCATCGTCATCCTGAATGAGGAAATTCTGATGTTC
CAACCAAACGGCTCGTTCTACAGGAGTATTGGAAAGGGACGCCATCAATT
CGTATATGTCACACCAGACAATAGAGGGAGGATCCTTGTGACGGACTATT
CATGCAGCAATGTCCAGGTGTTCGACTACTCCGGACACAGGCTATCCGGA
GTCGGAGGCTATGGACGCAGCGACGGCGAGCTGATTCGTCCCAGAGGCGT
TTGCATAGACAGCTCGGGTCACGTCATCGTAGCAAACGCTGGGAACGGGC
GGGTAGACATGTTCACAAGCCGCGGGGAGTTTGTCCGTACTGTCGTTGAT
ATGGAAAACCCGTGGGGCATCGCTGTG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000549-exon-Sc0000000-1564993656:3952660..3953439BlTCONS00000549-exon-Sc0000000-1564993656:3952660..3953439Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000549BlTCONS00000549-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:3952660..3953439 +
Properties
Property NameValue
GeneIDBlCUFF000293