BlTCONS00000546 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000546
Unique NameBlTCONS00000546
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:3942977..3944193+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000546 ID=BlTCONS00000546|Name=BlTCONS00000546|organism=Branchiostoma lanceolatum|type=mRNA|length=1217bp|location=Sequence derived from alignment at Sc0000000:3942977..3944193+ (Branchiostoma lanceolatum)
GAAGGCTTTACGGCGATACAATTTTTCCTTCATCTTGTTAACCAGCGCAA GAAGCTACAAACGCGAATCTGAAATCAATCCGTAAGTGATCGTTCTCTGT AGCACAAAAATTAGTTTTGTTTTCCTTTTTTTCGTGTAAGAGGATATCGT AGACAAAGATGAGGCATGAATAGCCTTGGCTGTGACATTTGTGCAACATT GTCTTAAAATTTGTGTTTGATTGTATTGTTTGCTTTTATAGCACAGTAAC ATAGCGTAACACACAAGACTTGCACTGAAGAGTTGCATATCTGGAAAGTG TACGGAAAGCTGGTGTTCCACTCTGTTGCAGTCTGCCTTTTTACCGGAAT ACCCTAGAATACACCGGAATACATCGGAATAGCCATAAAATAAAGGAAGG TGAATTCTACCGGAAAACACTATGCTTTGATGAGTAAACATCACAGACTG CTGTAATTTGGCATGAAATGATATATTCATGGCCCAGGGAACAAGAAATC ACCAGAAGATACTGATGGCCATCGGCGTTGGCTCCCCCGCCTGTCGGCAT GTTTGTTACTCATTGTTTGAATATACCATTCCGGTGTATTCCGGTGTATT CCGGTGTATTTCGGTGTAGTCCCCTCTGTTGAGGGAGCGTGTCGTAATAA TTCTTCGTCTTTGAAAATAGGATTGCTTCTAAGGTCGTCGGGAGGAATAC TACCGGGGATCCTTCCACTGGTAGAGCAACGGTCCTCATAGCCACTACAT TTTGTGACCAGCTCCATCTTTACGGCTTCTTCCCGTTTGCTCGGGATGAG AAGAACAGAACCATCCCTTACCACTACTACCCGGATGATTCTATAAGAAA AGAGCCGATCGCTCGAGAAAAGAAACACCACATGGACATAGAGTACAAGT TTTACAAAGGCCTTCACGAAAGCTCTGGAGGCGTTTTGAAGTTACATATT GGAGAGTGTGACAACCAGTAAATTGTCATCTCTACACCTTTCTCACATGT GATATCATTGCTATATGTCAGCTTAATTCTCGACTTTTCTATTTTACTTT GACATACTATAATACAGCCTGTGACTAGGGTATGTCGAAAACGAGACGCA TTTTGTACTTGACTGTACCTTATATGAAACTGAGCGCCAATCGCTGTTTG AGGTGATACAATTAGACAAGAGATATAAAAAAAATGCAGGATAAGTTCAA GTACCTGATGTCATGCA

Coding sequence (CDS) from alignment at Sc0000000:3942977..3944193+

>BlTCONS00000546 ID=BlTCONS00000546|Name=BlTCONS00000546|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000000:3942977..3944193+ (Branchiostoma lanceolatum)
AAGGCTTTACGGCGATACAATTTTTCCTTCATCTTGTTAACCAGCGCAAG
AAGCTACAAACGCGAATCTGAAATCAATCCGATTGCTTCTAAGGTCGTCG
GGAGGAATACTACCGGGGATCCTTCCACTGGTAGAGCAACGGTCCTCATA
GCCACTACATTTTGTGACCAGCTCCATCTTTACGGCTTCTTCCCGTTTGC
TCGGGATGAGAAGAACAGAACCATCCCTTACCACTACTACCCGGATGATT
CTATAAGAAAAGAGCCGATCGCTCGAGAAAAGAAACACCACATGGACATA
GAGTACAAGTTTTACAAAGGCCTTCACGAAAGCTCTGGAGGCGTTTTGAA
GTTACATATTGGAGAGTGTGACAACCAGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000546-exon-Sc0000000-1564993656:3942977..3943057BlTCONS00000546-exon-Sc0000000-1564993656:3942977..3943057Branchiostoma lanceolatumexon
BlTCONS00000546-exon-Sc0000000-1564993656:3943647..3944193BlTCONS00000546-exon-Sc0000000-1564993656:3943647..3944193Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000546BlTCONS00000546-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:3942977..3944193 +
Properties
Property NameValue
GeneIDBlCUFF000291