BlTCONS00000509 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000509
Unique NameBlTCONS00000509
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:3647726..3650570+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000509 ID=BlTCONS00000509|Name=BlTCONS00000509|organism=Branchiostoma lanceolatum|type=mRNA|length=2845bp|location=Sequence derived from alignment at Sc0000000:3647726..3650570+ (Branchiostoma lanceolatum)
CTGTCTTCTTTAAAAGGACTGCATCTACTTACATAGGTAAGACCTCGCTC GCTGTCAGTTGCTTCCAAAGAAACGTGTTGTTAAGAATGCCTTTTTTGTT TTCCTAATCGGCTGGAGATATGATTTTGCTCCCGACCACTCCCCGGCCAA AGTCGTCTGTACATGTAGGTTAGGTGCAGCATAGAATCCATCCGGCACAT TCTAGCTTCAGTTCGCCCCTCTGGCAGCATCCAAAGCAGAATAGATGACT AAATTCGACTGAAGCCCTTGTCACACAGCCGACGAGCATCGGCCATATCT GTTGATCATCACCAACAGGTCGCCCGATCCTATTTATCGACAGAGGGTCG GGCGTATTTTTCACTCGGTGACCTGCGAACTCTGACCGATCCCTAAAAGT TACGCGACGGTCGAGAGACTTGAAAACCGGGCGTATTAGTAATTACCGCG GAAAATGTCGTGCGGTATGACGGGGGCTGCAAAGACTAGTATGGAACCTT ACCGACCAACTCCCGAAAGCCGACCTTGATTTTAATTGCACCCAACTGCT GACTCCCAACCACGGTCTGGGGAAGGTTGGGAGAGAAACATGTGAGAAAC GTTCTGACCTGATTTTATTTGTTTTACTTCTGTGAATGTCCCGAGCCCCG AACGTTTTAGTAATTCAATGCTTGGAAGACGTAGAATCGATCAACTTGCA CGTTCTGAATGATCGGTCGCCCTGTATGATCAATCCACCCCACCAATGTG GCGGCTACATGGATTGCGTATGAACTTATTCGCTTGTGTGTGTGTGTGTG TGTGCGTGTGTTTCTGACCTACATTAAAGGGGTGAAGTTTGCCATCCCTG ATGACCTCGTTGTCATTCAAGCACAAGTCGATGCCGATTTTGTGATTATA GTAACTCATTCCGTCAAGTAACACAAGTAACATCGTTCTGTCTTCTAGGC GCAAATCACNGTTTCTATTCAAATCAGTAACCATGGCAACCATCAGAGGC AAGCCCGTTGCCCTGGTAACGGGAGGCGGGAGCGGCATCGGTCGTGCCAC GGCCGTCAGGTTTGCTGAGCTGGGGTACAGCTGTGTGGTGGCTGATATCG ACGAGCAGAAGGCGAAGGAGACACTGCGCATGCTCCAAACTCCGGGGATC GCCGTGCAGGTGGACGTTATCATAGCAACAAGCGTGGAAGCCATGGTAAC CACGGCGGTTCAGCACTTCGGGCGGATCGACTGCGCCTTCAACTGCGCCG GGGTCGTGACTACGAACGCCACAATTGTGGACACGCCTGAAGACGAGTTC GACCGCGTCATGGGCGTGAACGCCAAGGGCGTGTGGCTGTGTCTCAAGTA CGAGATCGCCCAGATGCTGCAGCAGGAGCCCGTCATGAGCGACCCGGCCA AGTGGGTGGACAAGCCGGACGTGTGCCGCTTCCTTGGGGTGCGGGGCAGT ATCGTCAACGCCAGCAGCATCACGGGCCTGGGTCCTGTTCCTGAAACTAA CGCTTCATACTGCGCGTCCAAATTTGCCGTCCAGGGTCTCACCCAAACCG CTGCGGTGGAGTACGCCAAGGAAGGGATACGTGTGAACGCCGTCTGCCCT GGTCTCACCGCTACACCTCTGGTGGATCAGTTCCTGGAAAAGACACCACC AGGTACGGCGGAGAAGCTGCTTTCGATGTATCCTGTTGGTCGCGCAGCAA CGCCCGGAGAGGTTGCGGAAGCCGTTTGCTGGCTTTGCAGCGACGCCTGT CCGTTCACTACGGGAGAGCACCTAAAGATAGCAGGGGGATATTAAACACA GTACGGCCAACAAGATATCAGCTATTGATGTATTTCAGGTGTTAATTTTG TAGTCCACATTATCTACTGAAGTAGACTGAATTTTCGGACAATGGTCGAG ATGAGAGCTGTCTACAAGTCAGGGGTCGTCACCTTTGACATAATACGCAC AATTCCTGTCACCGCAAATCCGCACTCGGAAGTATGGACGAGCTTATTGT CCAAGAATCCCGAATTCCCTGGTGCTAACATTAAGTAACAATACAATACT ACTGAAAATGAATAATCATGGATAATTTATATCACTGTTATTGTTGACAT AGAGTTTAAAAAGCAAGTCAAAAGAATCATTTTTACAGCTTAATTGTAAA TTAACATGCACACTGAAACAATACAACTTACACCATGAGATTACATAATC AATATCACCACAGCTGTTACAACTTGTTCATATTTTCACATACATCATTA TTGACAGTCATTGATGTTACAAAGTAGATGTATCTATTGCCATCTTAGCC ATTGGACTACTAAATGCAATATGCATGTACATAAGTATAATTTGTAATAT CAGCAGCAAAGACTTTCATACTCATACTATTGCACAGTCAACTAAGACAT GGTATGGAGCATTAATGATAACTTGGTTCCATTCTTTTCTAACTCTGGTT TGCTCTTTTAAAGGCATCCAGAGCATTTTATGATTCTTGAAACTTTCTAG TCATTCCTACTCATAGTAAGTTTCAATAACACTATACCATTACATATCGC CATTAAAGGAGCAAAGATACGATGTCGTTGTGTGGTGAGAACTGATAGAA AATCCAAGCCCTAGTAGACTGATCATGACTGTCCACCACAATTAGCGGTT TGACCAATGAGAGAATGACGCATGTCCGTCAAATATTTGCATTTTCATGT TTTAACTTTGCATTTCTACGTTTTGACAGAGGTGGGTGGGGCCATGGTAT CGGTCTATTTACACTAGACGCGTGAAACTAAAAGATCACCATGTAGCTTA TTTGTGTGCCGCTTTTGAGCACTTTTGATAAGAAATCCGCACGAA

Coding sequence (CDS) from alignment at Sc0000000:3647726..3650570+

>BlTCONS00000509 ID=BlTCONS00000509|Name=BlTCONS00000509|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000000:3647726..3650570+ (Branchiostoma lanceolatum)
GTCTTCTTTAAAAGGACTGCATCTACTTACATAGTAACCATGGCAACCAT
CAGAGGCAAGCCCGTTGCCCTGGTAACGGGAGGCGGGAGCGGCATCGGTC
GTGCCACGGCCGTCAGGTTTGCTGAGCTGGGGTACAGCTGTGTGGTGGCT
GATATCGACGAGCAGAAGGCGAAGGAGACACTGCGCATGCTCCAAACTCC
GGGGATCGCCGTGCAGGTGGACGTTATCATAGCAACAAGCGTGGAAGCCA
TGGTAACCACGGCGGTTCAGCACTTCGGGCGGATCGACTGCGCCTTCAAC
TGCGCCGGGGTCGTGACTACGAACGCCACAATTGTGGACACGCCTGAAGA
CGAGTTCGACCGCGTCATGGGCGTGAACGCCAAGGGCGTGTGGCTGTGTC
TCAAGTACGAGATCGCCCAGATGCTGCAGCAGGAGCCCGTCATGAGCGAC
CCGGCCAAGTGGGTGGACAAGCCGGACGTGTGCCGCTTCCTTGGGGTGCG
GGGCAGTATCGTCAACGCCAGCAGCATCACGGGCCTGGGTCCTGTTCCTG
AAACTAACGCTTCATACTGCGCGTCCAAATTTGCCGTCCAGGGTCTCACC
CAAACCGCTGCGGTGGAGTACGCCAAGGAAGGGATACGTGTGAACGCCGT
CTGCCCTGGTCTCACCGCTACACCTCTGGTGGATCAGTTCCTGGAAAAGA
CACCACCAGGTACGGCGGAGAAGCTGCTTTCGATGTATCCTGTTGGTCGC
GCAGCAACGCCCGGAGAGGTTGCGGAAGCCGTTTGCTGGCTTTGCAGCGA
CGCCTGTCCGTTCACTACGGGAGAGCACCTAAAGATAGCAGGGGGATATT
AA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000509-exon-Sc0000000-1564993656:3647726..3647761BlTCONS00000509-exon-Sc0000000-1564993656:3647726..3647761Branchiostoma lanceolatumexon
BlTCONS00000509-exon-Sc0000000-1564993656:3648703..3650570BlTCONS00000509-exon-Sc0000000-1564993656:3648703..3650570Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000509BlTCONS00000509-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:3647726..3650570 +
Properties
Property NameValue
GeneIDBlCUFF000275