BlTCONS00000462 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000462
Unique NameBlTCONS00000462
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:3444477..3446217+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000462 ID=BlTCONS00000462|Name=BlTCONS00000462|organism=Branchiostoma lanceolatum|type=mRNA|length=1741bp|location=Sequence derived from alignment at Sc0000000:3444477..3446217+ (Branchiostoma lanceolatum)
AGGTTTAAACTGTGCATCTGTGGACCTCAGGAAGCTGGCAAATCTACTCT GAATGAAAGTCTTCAAACGGTACGATGTTTCTATTAGAATTCTGCTTCCA CCAGAAACTCAGATGTAAGGGGAGAGACCACCAAATGACTTGCGCCGTAG AATGCCCCGCGCATACCCGTTTTATTTTCTATTAATACTCTTTCAATACT TTTTTTTCCTGAGCGACTTTTCTGAATGCTTCGACACTGGTTGGACTGAT CAATTATGATAGGGGGTGAAATCTAGCCTCCACCAGTCTCTGCGGGTCGC TGGGAAAATAGTAGAAATTGGCCAAATAGAGTCAATTGTATGAAGGGAGT AGGCTACGGAGAGAGGGTCAAATATGCAACAGCGGATGGAAATGTTATCC TCCATGGCCAAAGTCCCCCTGCAAATGTTCTCTCTATAGCCGACGCTGTT AGTCTGGTAGAGACTAGGTGAAATCCTGGTCTCATGTCAAATGTCACTGT AGCTCGTATATAAGATACCGGAATTGACGCCTTGTTTTTTTTTTACCTTA AGAAACCTGACCTACCCAGCTTTGCAGTAGTGGTAAAGCCCCTGTCACAC TTGTGCGTGTAGCCGTTGCGTGTGTAGCCTGGATGCCAGACCCCCAAACT CTGAAATATCTATCGTACACGAGTTTGGGGGTCTGGCATCCAGGCTATTG CGTGTGAGTTGCGCATTGACATTTTTGTCATACGCCGGCGTGCGCACAAT ACGCACCTAACGCGTATCTAAATCGTTTTGTGAAAGTTTTAGGTACGCAG TCATACGCACAATATGGCCCAGTAGGTATGATAGGTTGGGTTATTAACGA AATTACGCTAATACGCAAGTTATTCGTTATAAATAGCTTTCGATTATTTT GATGAATGTGTGAGGCACATCTAACATGTGAATAACGATATGTGGGTCAC ACATTCGTCAAAATAATCGAAAAATTCCACAACTGTTGTGCGTACAGCTG CGTATTGAATTTTGTCCATACGCAACTCACACGCAACGTGTATACGCTCA AGTGTGACAGGGCCCTAAAGATTTGAGGTTTGAAATATATGTAAATGTGT TTTAACGGGATTGTTTTGCATGGCTTGACCATGTGTTGCTAAGGAGAGTC CATCAGTTACTGATTCCTCTCCTCAGACATCCTGTGTGGAAATAGAGCAC AGTTGCTAGAAACGGAATCATCCCGGAAGGGTAGTTATGTACATGTGCCC TTTCTTGACATATTTACGTTTTTTAGTAAATTTGGAGACACATTTCACTC CTGTCCTAAATGAATCTTACGACATATTTCATATAGGGACCTTTCGCCGC CTTCTTCCGGGATCGAATGACTCCAGACAACCAGCCACACGAGCCCACCC CTGGTGTGAATGTGGGAACAACCAACATTCCCGGTGTGGGGGAGGTCAGT GTGTGGGACTTCGCTGGACAGTCGGAGTACGCGGTAACGCACAGCATGTT CATGGATGCAGAGAACACCATCTTCATTGTGATGTACAGCATCATGGACG ACATCACAACACAGAAAAGAGAGGTGGTTGTATTTACTAGATAGATAGCA AAAATCATATTGTCTTACCTGCGTCTAACTTTTCTTGCATAACAACCCTA TTCTTCTTCACAGGTCCACTGGTGGTTGTGTTTCATCAAGTCCTGCAACA CAAAGAGTAAGCCTAACGTCCTCCTAGTGGCCAGTCACGCA

Coding sequence (CDS) from alignment at Sc0000000:3444477..3446217+

>BlTCONS00000462 ID=BlTCONS00000462|Name=BlTCONS00000462|organism=Branchiostoma lanceolatum|type=CDS|length=384bp|location=Sequence derived from alignment at Sc0000000:3444477..3446217+ (Branchiostoma lanceolatum)
AGGTTTAAACTGTGCATCTGTGGACCTCAGGAAGCTGGCAAATCTACTCT
GAATGAAAGTCTTCAAACGGGACCTTTCGCCGCCTTCTTCCGGGATCGAA
TGACTCCAGACAACCAGCCACACGAGCCCACCCCTGGTGTGAATGTGGGA
ACAACCAACATTCCCGGTGTGGGGGAGGTCAGTGTGTGGGACTTCGCTGG
ACAGTCGGAGTACGCGGTAACGCACAGCATGTTCATGGATGCAGAGAACA
CCATCTTCATTGTGATGTACAGCATCATGGACGACATCACAACACAGAAA
AGAGAGGTCCACTGGTGGTTGTGTTTCATCAAGTCCTGCAACACAAAGAG
TAAGCCTAACGTCCTCCTAGTGGCCAGTCACGCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000462BlTCONS00000462-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000462-exon-Sc0000000-1564993656:3444477..3444545BlTCONS00000462-exon-Sc0000000-1564993656:3444477..3444545Branchiostoma lanceolatumexon
BlTCONS00000462-exon-Sc0000000-1564993656:3445813..3446049BlTCONS00000462-exon-Sc0000000-1564993656:3445813..3446049Branchiostoma lanceolatumexon
BlTCONS00000462-exon-Sc0000000-1564993656:3446140..3446217BlTCONS00000462-exon-Sc0000000-1564993656:3446140..3446217Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:3444477..3446217 +
Properties
Property NameValue
GeneIDBlCUFF000242