BlTCONS00000437 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000437
Unique NameBlTCONS00000437
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:3305173..3309451+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000437 ID=BlTCONS00000437|Name=BlTCONS00000437|organism=Branchiostoma lanceolatum|type=mRNA|length=4279bp|location=Sequence derived from alignment at Sc0000000:3305173..3309451+ (Branchiostoma lanceolatum)
GTCCGACCTCTGACCAGTCCTGCTTTGACAGCACTCCCCTATTGTCAGTC
TCAATCTGTCTCTGCGTCCAACATCTTCCCTTAAGGCCCTTAAAACACCG
GAAACATGGATGTCAACGATTCTGTGATCACTACCGTCCGGCTTGTAGCC
GACTACGTGCCGCAGAATCCGTTAAGCGGGCCGTTCGAGGAGAGCTGGCG
GTCCATGACTGAGCACTACACCGAGTACCAGATCGCTACCTGGGGGTCCC
TGTTTTTTCATGAGGTAAGGCCCGTTTTAGGTTTTGCGAAAGTAAGGAGG
CGATGCATTTTACACTAGTCGAATACTACACAGTGATTACTGTAACATGG
TGGTTTTTGTATGTATGATAATATCTCGGCGCCTTTCTTGCATAAAATCA
AAACTAGGTAGGTCAAGATAAGTCACCTTGTCACATGTACATCTTTTTTC
TATCGTATCTGTTGCCTTGTGCCACCTGCGTGCGATGCATGGCAATTATT
GCTGATAATGGCACCTCGTCCCAAATGTTAGAAGGGAACGCAGGTTTAAT
CATTTGCGATTTGAAGTACATTTGTGTAACGTTTGGGGATTTGGGTCTTG
TCACGGTGATGGACAGTCAGTTTGGGATTATTGAATCACATTCATAACTT
GTGTTCAATAGTCTTCAGCTATGAATTGATTTTTCTCAAATTATAATGAA
CGTTTGACAATGTTCGTATTGAATCGGAATGGCAAGTTGATTTATGATGC
TAGGATTTGAAGTACTGTGGTCAACCACAGTTGATTTATGATGCTAGGAT
TTGAAGTATTGTGGTCAACCACAGTGTTTATTTTACGTAATGTGTATCCA
GTTGTGTACATAGTCACTAGCGGTTTGGGATCTTTGTACCGTTCTATGGG
TCACTTTTGTATCGTTCTTCAGATCACTGACCTCATGGCAGAAAACCCAG
TAAAACAAACTTTACTCTTCTTTAGTGATAAGAATTTGGTCCACTTTTTC
CACAGATGACCTACTTTCTGATCTGCCTTCCCGGGTTTCTCTACCAGTTT
CTTCCTTTCATGCAGAAATACAAGATTCAGCAGGTAATGTATAAAATAAA
ACCACTACTATCCTAATTATTTACAGAACTGTTGTTGCTTATCCTTACTG
TTTGGAATTAACAGAGGAAAGATGTTTTGTGTCCTTGTATAACAGTAATG
TTCGCACTGTTTTTTCACGGTATTTTACATTTTTTTAAGCCATGATGGAA
TCTGTTTAGAAAGGCATATGATATAAAGTGTACATGAAAGAGTGAGTGAG
TGAGAGAGAGAGAGGGTGGGTGAGAGGAAGAAGAGAGAGAGTGAGAGAAA
AAGAGAATGTGTGTGTGAGGGAAAGAGAGAGAGAGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGAGGGAAAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGT
NTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACA
AAAACAGCATGAGAGAGGGAGGGAAATAGAGGGGAGAGGAAGAGAAAAGA
TTACTGAAAATGATTTCTTTCCCTCCAGAGCAAGCCTGAGACGTGGGAAG
CCCAGCTGCAGTGCTTCAAGCTGCTGATGTTCAGCCACTTCTTCATCCAG
ATGCCGCTGATGTGTGGAACCTACCACTTCACTCAGTGGTTCAACATCCC
CTATGACTACGACTCTATCCCACCGTGGTAGGCTTTCTTTTTTTGGTAGT
GATTCATTTACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCA
CTCACTCACTCACTCATCCATTCATTTGTTCATGCACCTGCTTCCATCTA
TTCTTCTACTCATCCTCCCATCCTCCCACCCATCCATCCATCCATCCATC
CATCCATCCATCCATCCATGCATCCATCCATCCATCCATCCATCCATTCA
TTTTCCATACAACAGTTAAGTTTTCACTGAAAAGCAGTGCCATGCATTCC
ACATTCACAATCCGTAATTTGTACATAAAAAATCAAACTTTTTAAGACAA
AGAATTGATTCTTATGTAAACACATTTGTTCTCCCAGGTATGTCCTAGGC
CTGCAGATATTTGGGTGTTTTGTAGTTGAAGACGTCTGGCACTACTTCCT
GCACCGAGTTCTGCACCATAAGAACTACTACAAGTATGTGCACAAGGTGC
ACCACAACTTCCAGGTATGTACGTTGTACTATTAAAACTGCTGTAAATGA
TCTATTTTTGTTGGGACTCCATTTCAGAGTAGAAGGGAAAATCAGGTTTT
CACAGTGTTTTAAGGTAAGCTACTAATAGTTGAAATGATTATGCATGCAT
TCTCAGGGGATGACCATTAGTATTGGCATTACTTGATTTTTAGAATTACA
CATGGAAATATTTCACAATAGTCTTAATTTTCTGTACCTGAATAACCCCA
TCCTCCTTGGCAGGACTGTACTGTATGGCGGCATAGACTAATGCCTTGTA
TCGCAAGGCATCAAGTGTATGCCGCCGTACAGCCCTCTATAGGAGGATGG
AGTGATGCTGCCATAAAACAGTTTGTCATCTCTTGCTATCGTATAGGCCC
CATTTGGAGCAGTGGCGGAGTATGCCCACCCAGTGGAGACCCTGGGTGAG
TGCTGGAAATTATTTTTTCTTCACGATAATTCAATGTTGTAATTCGAGTG
GGAAAGAGGCTTTCACAGCGTTTTAAGTTCGCAGCTGAAACATTTCTGTA
GTACAGTAGAAATACATTGGAAACGCATATTTGCAGTGCCATTAATTTGC
AGTGAAGAGGTCACTGCAAATATCTTGTACCTTTTGACTGTCTTTTGAAC
ATAATATGATAACCTTATTACCGGGTTGATGAAGAGACAGAGAATTTGTC
TCGAAAGCTCCCCATAGCAATCTTTTTTATGTTGTGTGTAATGCTTAAAT
GTTTGTCAAAAGTATAATATAAGTGAATGCACATTTGGTGTCATAAATGT
CACATGAAATCTATCGCAATCATAACATGAAGAAAAGAACTTCTTAACTT
TTTTTACCCTTTGTACATTTACCCAGTGCTGGGAACCGGATTCTTCCTGG
GCATCCTTTTCTTCTGCAGCCACTTTGTTCAGATGTGGGTCTGGGGGCTG
TTCCGTCTGCTGGAAACCATAGATGTACACAGTGGGTACGACATCCCGTA
CAACCCAATGCACCTCCTACCCTGCTATACAGGTAATTATCGTTATAGGA
AGGATGTAATAAATATGTTTATGACTGTACGTATAATAGAGATATGAATG
GATATATGGACACCATAGACGTGCACAGTGGGTACGACATCCCGTACAAC
CCGATGCACCTCCTGCCCTGCTATACAGGTACATGTAATGATTGTTGTAG
AAAGGGTGTATATATTTACGACTGTAGTCACTGTTCGTACGTATATATGA
ATGCATGTATGGAAGCCATAGACGTGCACAGTGGGTACGACATCCCGTAC
AACCCAATGCACCTACTACCATGCTATACAGGTACATGTAATAATTGTTG
CAGAAAGGATGTATATACTAAAGACTGTAAGAACCAAGGACATTATATAA
TGTCCTTGTAAGAACGTATAATAGAATAGATATATGAATGGATGTATGGA
AACCATAGATGTGCACAGTGGATGCGACATCCCGTACAACACAATGCACC
TCCTACTTTGCTACACAGGTAATTATCGTTATAGGAGGGATATTTATATC
TATGACTGAATGTATGTATGTAGAGATAGATAGATATGTGGATGGGTGGA
TAGAGGAATGGATGAATAAAGCAATGATTGAATAGATAAATGGATAGATA
GATGGATGAGTTGATATATGGATAAAAGGAAAGGATGGATGGATAATATA
TGCACATGTATGTATAAATGATGCCTTGATTTGACTAGAGTGTTATATGA
CCCCATATAAAGGACACACACTAGCAATAACATTATGGTACAGTGCCCTA
AACACTATAGTAAGACCACCTGTTTTATCATGCTATTAAACATGCATGAT
ACGTTTTCCACCAGGCGCACGCTTCCACGACTTTCACCACATGAACTTCA
ATGGAAACTACGCCCCGACCTTCAGATGGTGGGACAAACTGTTCGGCACC
GACTGGCAGTACAAGGAGTTCTGCAACAAGCAGGCTACTAAAGACGGACT
GAAGAAGGACTAAGAAAAACCTAAGGAGTTAGGCAGCAAGCAGGCTGCTA
AAGATGGACTGAATGAATGAGGACTAGGA

Coding sequence (CDS) from alignment at Sc0000000:3305173..3309451+

>BlTCONS00000437 ID=BlTCONS00000437|Name=BlTCONS00000437|organism=Branchiostoma lanceolatum|type=CDS|length=867bp|location=Sequence derived from alignment at Sc0000000:3305173..3309451+ (Branchiostoma lanceolatum)
ATGGATGTCAACGATTCTGTGATCACTACCGTCCGGCTTGTAGCCGACTA
CGTGCCGCAGAATCCGTTAAGCGGGCCGTTCGAGGAGAGCTGGCGGTCCA
TGACTGAGCACTACACCGAGTACCAGATCGCTACCTGGGGGTCCCTGTTT
TTTCATGAGATGACCTACTTTCTGATCTGCCTTCCCGGGTTTCTCTACCA
GTTTCTTCCTTTCATGCAGAAATACAAGATTCAGCAGAGCAAGCCTGAGA
CGTGGGAAGCCCAGCTGCAGTGCTTCAAGCTGCTGATGTTCAGCCACTTC
TTCATCCAGATGCCGCTGATGTGTGGAACCTACCACTTCACTCAGTGGTT
CAACATCCCCTATGACTACGACTCTATCCCACCGTGGTATGTCCTAGGCC
TGCAGATATTTGGGTGTTTTGTAGTTGAAGACGTCTGGCACTACTTCCTG
CACCGAGTTCTGCACCATAAGAACTACTACAAGTATGTGCACAAGGTGCA
CCACAACTTCCAGGCCCCATTTGGAGCAGTGGCGGAGTATGCCCACCCAG
TGGAGACCCTGGTGCTGGGAACCGGATTCTTCCTGGGCATCCTTTTCTTC
TGCAGCCACTTTGTTCAGATGTGGGTCTGGGGGCTGTTCCGTCTGCTGGA
AACCATAGATGTACACAGTGGGTACGACATCCCGTACAACCCGATGCACC
TCCTGCCCTGCTATACAGGCGCACGCTTCCACGACTTTCACCACATGAAC
TTCAATGGAAACTACGCCCCGACCTTCAGATGGTGGGACAAACTGTTCGG
CACCGACTGGCAGTACAAGGAGTTCTGCAACAAGCAGGCTACTAAAGACG
GACTGAAGAAGGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000437BlTCONS00000437-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000437-exon-Sc0000000-1564993656:3305173..3305436BlTCONS00000437-exon-Sc0000000-1564993656:3305173..3305436Branchiostoma lanceolatumexon
BlTCONS00000437-exon-Sc0000000-1564993656:3306178..3306255BlTCONS00000437-exon-Sc0000000-1564993656:3306178..3306255Branchiostoma lanceolatumexon
BlTCONS00000437-exon-Sc0000000-1564993656:3306751..3306899BlTCONS00000437-exon-Sc0000000-1564993656:3306751..3306899Branchiostoma lanceolatumexon
BlTCONS00000437-exon-Sc0000000-1564993656:3307260..3307386BlTCONS00000437-exon-Sc0000000-1564993656:3307260..3307386Branchiostoma lanceolatumexon
BlTCONS00000437-exon-Sc0000000-1564993656:3307769..3307817BlTCONS00000437-exon-Sc0000000-1564993656:3307769..3307817Branchiostoma lanceolatumexon
BlTCONS00000437-exon-Sc0000000-1564993656:3308249..3308364BlTCONS00000437-exon-Sc0000000-1564993656:3308249..3308364Branchiostoma lanceolatumexon
BlTCONS00000437-exon-Sc0000000-1564993656:3308511..3308550BlTCONS00000437-exon-Sc0000000-1564993656:3308511..3308550Branchiostoma lanceolatumexon
BlTCONS00000437-exon-Sc0000000-1564993656:3309237..3309451BlTCONS00000437-exon-Sc0000000-1564993656:3309237..3309451Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:3305173..3309451 +
Properties
Property NameValue
GeneIDBlCUFF000230