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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3290202..3297199+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000433 ID=BlTCONS00000433|Name=BlTCONS00000433|organism=Branchiostoma lanceolatum|type=mRNA|length=6998bp|location=Sequence derived from alignment at Sc0000000:3290202..3297199+ (Branchiostoma lanceolatum)
GATGAGACTGAGGTGCAGGATTTGATTGACAGGTATGATACGACATGACA
ATGAAGTTTACATCACATCAGCTGAACGCTGTAAATCATGATGTTTTTGC
AATGGTTTTATTTTTGTGGTCTCCACTGCAAATACACTGCGAATATGTGT
TTCCAATGTATGACTACTGTTCTACAGAATTGTTTCAATCACAAACTTAC
AACACTGCGAAAACCTCCTTTTCTCTCGAAATGATTCCACCTCGAAAGAA
AATAAATTTACGGTACATCATTCAGATTACACTTTTTTATGGTGTTTACT
GAATCCCACTAACATAATGTATTGATTTTGAAATTGTCAAAATTTTTGAT
TAGCTGCTATTTTCACCACAGACTGGGCCTTGCAGACCATGCTGACGTGA
CCTTCAGTGTCAAGGTCATCGAAGGAACCAAGAAACGAGGTAAAGCTTTT
TTTTTAGAAATGGGAAAACTTTCATGAATAGTTTACTGGATAACAAGATT
CAGTGGATTCCTACAGCTACTAATGTTGGTGTTGCTGCTTTATGTTTGGG
ACTGCATTGTTAGCGGCGCCACTTAGCCTGCAGTGTGGAATAGTACCAGT
CAGTATTGCCCTGAGGAAGGTGACAGACGGTCTGACCCAAACGTTGGCTG
TTGATTGCATATATATATCCTGGTTGTGAATAAAGGACCTTGTTATTCAA
AATGGAAATACTATAATAAATCCTTCTCACTTTTTGAAGTGTTTGTTTAT
GTAAAGAGTAAGTGTCACACCAGAAACTTTGAGATCTCACCTGTCCTTGC
AGCCGCTGCAGTCCCCGCCCACCTGCCTGCCAGGTGTACCATCCGCCACG
CTCTTCTCACCTGTCTGGAGATCAGGGCTGTTCCTAAGAAGGTGAGACAC
CTGTAGCACCTGTTCAGCTAATGTTATAACACCTATGGTAACACCTAAGG
TAAAATATGCAGCTGTAACAGTCATCTGTGTGTTTTTTACATGTTTAAAA
CATGTATTTTTTTGCAACAGATGTAACAAGAGCTATTTACTAATCAAAAA
TCATGACCATGGCATGTCCAGAACATGAGAAATCAAAAGTAAACAGGAAG
TTCCGCTGCAGAACCATATCAAGTCGCCAGGGGGCCCAAAGTCTCACCAA
TATGACCATTTTTTGCTAGTCCTTAAGATATTTTTCCACATTGACACAAG
CACACAGAATCCTGTCTACAGTGACCACCTGTCCAACATAAACCAGATTT
TATCAGTCCCCTTAATGGTATTCTTGGGCAGTTTGACTTGGCCTTTTTTT
GGTCTGACTCTCTGAGGTGGATTCTGTGACATCAGCAATTACTGTAGAAT
CATTGGGCATCTACCTGCGTTGTATTAGTTTAAGCCTCTAGGTACCTTTT
CATAATAAAAGAGTCTGTATCATAGATATAGAATACAACCGAGGGCAATG
CGACCCATGTAGGGGTTGGGATTTGGGGCTGGGACTGAGGGTGATGCGGA
ATACACCATTTTGTATTTTATTAATGTCATACCCTCCCGAAAAAACAAAA
TGCGCCAGACGTTAAGAGAGTAATAGTTTTGTGTCCTCAAACAAAAAAAT
TGTAGCAACATCGATTCCAACCTTTTCAAATTTTTACAGTGGCGCACTCA
GCGCACTTGAAATACATTTTAAATATTCTATGGAAGCCCATGTGATAGAT
GTAGAAGCCTGTGTGATAACCCAAGTTATCACCCGGTCTGGAACACCCGT
ATCAAACGTTTTCACGACCCAGGTATGACATAATGTAAGTTGTTGTGATG
TGTTGTTTTATTGCAGGCCTTCCTCAGAATGTTGGTAGAGCACACAAGTG
ATGCTGTGCAGAAGCGCCGCCTACAGGAACTGTGCAGCAAACAGGGTACT
GCAGATTATGCCTCCTTCATCAGAGAGCCGAATCTGAGGCTGCTGGATGT
GCTGACAGCTTTCCCATCCTGCTGCCCTCCCTTTGAGCAGTTGCTAGGTA
ACTAGATACTCTGTGTTTAGCCATTTTGGTTCCAAGACATTTTGTGCAGT
TCATTTTATTTCACCCCAAGTGACCGAAGTGTTGTTTTGCACTTGTCTGT
GTTCACAATACACACAATGTAGCATTGCCAAACATCCACAATGCTGCCTG
CTATGTATTAGCCTTAGGGTGCCATCCTATTTCTACCGGGGGCTCCTACA
CTCGCTACCCTAGAAAAAAAATTTTTTTTGAGTAGCGAGTGTAGGAGCCC
CCGGTAGAAAAAGGATGGCACCCAGGCTAGCTATGCACATTGTATGTGGG
GCTGGAAGGGTAGCAAAGCTGTATGGGTAAAGGGGTGAAGTCTGGTATCT
ATGATGGCCTTGCCCTGATAGAAAATCTCTATATCATTTTTTAAACCTTT
CTTTTATCTTTTAAAGAAAAATAACAAACACAATGAGTGAACCATCCAGC
GAGAAATGATTTGATCATATATAGGAACAACAATGTGATCAACAAAAATA
TCTGAAGTTCTGAACTTTCAATCATTCTTTAAACTTTGTTTTTGAAGAAA
TGCTGCCTAGGCTTCAACCAAGGCCATACTCTGTGTCAAGGTAAGGAATG
CATCAAGACTTTATTTTTATCTTTTAAGAACTTCAAGGTCTTTATCATAA
AGGGACCCAAAATGTCTTTTATGTATTGGTATGTCTGATTTTGTGGTTTA
AGGAAAAAATAGCGTATGCTAACTTTATGTACAGGTTATGGTAGCTGTAA
AAGAAAAAAAAGAGTGCTTGAACTGTAGATTCATAAAGGTTTTTCTGAAG
AGGGTAACAAGGGTGCTGCACCCCCATGTCCTTCCCCCTTATCCTGAGCA
GAATCCTCTGACAAGCATAGAATTAAGATTGACCAGTGATATTACAAGAT
ATTACAAGGTGACATGCGGCTGCAGTCTTCAACTGTGACCTGTCTGACAG
AAGTTCCCCCCTCAAGAAGCCATAGCATACCTCATTTTAGATGAAAATCT
TCTAAAATTCTACATTGTAGAAGGGGGAAACCCACACCATTTCCCCATTT
GGTCGCTCTGACTTTTTGCAATACCCCCATACAATTTTTTCTAATCTCCA
ATATCATATTTCAGCTCCCCGCTAGTGAGCCCAGACAGACTACACTTTGT
CTTCAACATTGTGGACATCCCATCAGGCAATGGGAGGGCTGCTGCCTGCA
CAGGTGTGTGTACAGGGTGGCTGGACAGGCTCACCAGGCACAGGCAGACA
GGGGTGTATGGGGACTTGGCTGAGGAGGATAGGGTTGCTGAGAGAATGGA
CCAGATGTCGCTAAATAATCCATTGAAGGTAAGCCTGGTACTTTTTTATT
TCCCTCCTTACATCTTATGCTGTGAAAGTATGTCCCTGCAAAAATAGACT
AGAATTGACAGAACTTTATCTAAATTATGCTAGGGTCACATTTCCCAGCC
GGGATCCGGCCGGGCTGTTTGCGGAAACGAAAAATTAAAATGTATATCAA
TAAATATGCACAAGCTATGCTCTTGAATAATTTTTGGTACGTTTTGTGCT
TTTTGTTGTCTTTTATATCATACCTTTTGTTCTGTAACACTGACCGGCCG
GGCCCCGGATTGAAAATGTGACCCAAGCATAACATGTGGTCAGAAGACAC
AATGGGGTTTTCTTGAACAACTATAATGTTAGACCACTGTAACACTGGGT
TTCAAGCGCCACCAAATGCAACTGACCAGTCTAACCGGTCCGGACCTTTT
AGCCTAGTGGTTAGCGCATTGGGGTCATGAGCTGGCGGCCCTGGTTTGGT
GTGTGTTCAAAGCCCGGGAGCCAGGAGACTGTAAAAGTCGCCTCTTGTGT
TTCACTACTAGCTTTGTTGCATATGATGGAGCTTATAGCATATGGATACA
TCATTCATAGCATATTTATTCTTGACTTGTGAATTAGTGCAAGGTGATGA
TGCTTCAGTTCAATCCATGCACAAACACATTTCATGAAGGCTATGTTCTT
ATTCTCTACAGATTCCGATCTACCTGAGAACCAACACCCACTTCCGGCTG
CCCTCCGACCTCTCTGTACCCCTCATCATGGTGGGACCTGGCACGGGTGT
GGCACCTTTTGTAGGGCTCTTACAGCACAGGTAACTGTATTTGTATTTGT
ATTCATTGACAATGAAGACGAGTCATTACACTGGGTCAGCCTAGGCAGCT
TTCAGTGGTAACGGCTGACCCACAAATACAGACAAATATACAACTCATAT
ACATACACATGCAATCTGCAGTAAAGTCATTACAGTATACATAGTATAGA
ATACAATATAATATATAATGATAAATTGATAATACAGTACAAAATCATTG
GAATCAATAACCACCATGCAAATAAATGAACACATCGTCATGATTGACAG
TTAAAGCATATGGCGGCGTTGAAAATGTGACCTTTGCCAAGCAGCACCTG
TTCTGCCAAACATTCCACTTTATTGGAGAATCATAATGAATACTGATAAA
TAAATGAGTTGGTGAAGGTTTCATCATCATCATGTTTGCTGCATGTCAGT
AGCTGCATGTACTGAGGCAAGCTATCATTGTCTCTATCATCTGCTAGTCG
TTTGTGGCTAAAGGTTTAATTATTTTACACTTAGATGGCACTAGGTAAAA
ACTGAATATCTGATGTGCTTTGACTTTGTTAGATTTAGAGCTTTAGTTTT
GGTGTGTCATCTGCATGGTTTGCGAGTTGTATTATAATTTTTATATTCCT
CAGTTTCTTTTTTTTCCTCTTGTAAGGGGCACTTTGAGTTCAGAAGACTG
ACATGTACTGTTTGTTTGTTGTCATAGGGAGAAACAGAGAGAGCTATCCC
ATAATGCAGTGTGTGGACCCACCTGGCTGTTCTACGGATGCAGACACAGA
GACAGGGACTATCTCTACAGGTCAGCTGGAATGACTATTCAGTCTTAAAC
ATAATTCTGACACCCTGAACGATAAAGAAACAACCAAACGTCCCCCAGTA
TAATACACTCCTGTATATCTAAACTGTGCATACCGGTTGGGGAGGGGATG
CTGCACTAGAGATCTCTTAAATCCAATGTTTTTCAAAGTGGCTGATTTAT
GTAACCTGGTGGATTAATGTTCATGGAGGTTAAAGATTAGAAAGCATGTA
GAGAAACTAGTGACAGAAAGAAATTCAAAACCTTTGGTTCGTAAGTTGAT
AAAGGACCGGAGAATTTATAATATAGTTATTTTTCCCATGTTTGACATAT
GTTGCAAAGTGGTCTGGTGGTTAGGGTTGTTCACTTTGAATCTAAAGGTT
CTGGGTTCAAATCCCTGGCAGGCCCCACTGTTTCATTTCATTCATTTTAT
TTATTCATTTATTTAGCCAGCAAACACACTCAGGTCTCTTGACCTGTTTT
TCAGGCTCCCTGGATACAAACACAATGCACAGACATAATACACAATGATC
ACGATTATATACAATTTTAAAAACTTGGTGTCAGTCCTAATTCCATTCTT
AAAGTCCATTTCTAAAGGTCGATATGGCAGTGTTTTGCCCTTTGGAAAGG
CACTTGACAACATCTCGACTCAAAAAAAATGAGTACCTAGCTTTGGATAT
ATACATCCTCTTTTTAACAATTAACCTTATCGTTGATGATTGACTTGAGG
AGACTAGCCAACAGTAAGTTGAAATTTGGATCAAAAACCAGACTTGCAAG
TATAAAGCTATTCTAAAGTTGACTGATATTGACTCTGTAGGAAAGAACTG
GAGCGATTGGCAGCGGCAGGTGTACTGGACCACCTGGAGGTGTGCTTCTC
GAGGGACGAGCCTGTTGCCATGGAAACAGATGGAGCTCCACCCGCCCGTT
ATGTACAGGATAACTTGCGTCGCCATGGCGATGATGTGGGAAGGATGTTG
TTGGATGAAGGAGCTGTGCTATTTGTTTGTGGGTGAGCAAAAGTTTAGAT
ATTTTTTTTAGATAGAAATAAACAGTTTAGAATTTTTAGCTTGAAAAAAA
AAGTTGATAATTTTTACTTTTAGCAAAAAAAAGTTCAGATTTTTTGGCTA
GAAAAAATGTGATCCAGTATGAATATAAGGGGCTCGAAATTCTTGGAAAT
GTGTAAACTGGTGCAAAGAAAAAATTTGGGGTGTTCAACGTGAAATAAAG
TAAAATGTCAGAGTGTCAGCAAAACCTAAGTTCACAACTTAATGCCTCTC
TTCAGAGCTCGAATCAGAAAGTCTTTAGACATCTTCAAAATTGTTAGCAC
CAAAGTAAAACACCGAACTTTAAGGTTTATCTTTTTTTCTGACACATTCA
TGTGAAGAATATGTTCACTCCCACTTTCTTCATGGTATCTTTCTAAATCT
TATCCTCAGAGATGCCAAAAACATGGCCAAGGATGTGAATGAAGTCATCA
TTCAGATTGTGCAGAAATACAAAGGTAAGTTTTCAGTTGAAATGTGTTAA
TGAACAGTACCATTGATAGATTAACCTTTAAATTACAACATGTAGTGTTC
TAATATTATGAAAGAAATGAACAACTGCAGTATACTGTAAATTTTGTTAT
TTGCACAGGGTTTCATTTGTGTATTAAAGAAGGGGCAAGAAGGTGTTCAC
TGTGTTTTAAGTTTGCAGTTGAAACAATTATGTAGTACAGTAGCAATACA
TGTACATTGAAAACACATATTCATAGTGTCATCAATTCGTGGTGGAGAGG
TCATCACCAAAACAGGACAAATACCACACCTGACATTTCAATAACTACAT
TACAGTAAATCCTGTATAACAGTGACGGATACTTTGTTCGTGTTCAGGCA
GTGGGAAACATTTATGATATTGTTGTCCTTCAACAATTCATCTCAACAAC
TGTCCCCATTGCTTTAGGTCCTTTGCATTGTCTAACATTTTTCTTGCTGT
TTTTTCTCAGATTGTACCATCCAAGAGGCTAGAAACACAGTCTTTCAACT
CAGACAGGACAGACACTACATGGAGGATATCTGGACTTGAAGTCATCT Coding sequence (CDS) from alignment at Sc0000000:3290202..3297199+ >BlTCONS00000433 ID=BlTCONS00000433|Name=BlTCONS00000433|organism=Branchiostoma lanceolatum|type=CDS|length=804bp|location=Sequence derived from alignment at Sc0000000:3290202..3297199+ (Branchiostoma lanceolatum)
ATGCTGCCTAGGCTTCAACCAAGGCCATACTCTGTGTCAAGCTCCCCGCT
AGTGAGCCCAGACAGACTACACTTTGTCTTCAACATTGTGGACATCCCAT
CAGGCAATGGGAGGGCTGCTGCCTGCACAGGTGTGTGTACAGGGTGGCTG
GACAGGCTCACCAGGCACAGGCAGACAGGGGTGTATGGGGACTTGGCTGA
GGAGGATAGGGTTGCTGAGAGAATGGACCAGATGTCGCTAAATAATCCAT
TGAAGATTCCGATCTACCTGAGAACCAACACCCACTTCCGGCTGCCCTCC
GACCTCTCTGTACCCCTCATCATGGTGGGACCTGGCACGGGTGTGGCACC
TTTTGTAGGGCTCTTACAGCACAGGGAGAAACAGAGAGAGCTATCCCATA
ATGCAGTGTGTGGACCCACCTGGCTGTTCTACGGATGCAGACACAGAGAC
AGGGACTATCTCTACAGGAAAGAACTGGAGCGATTGGCAGCGGCAGGTGT
ACTGGACCACCTGGAGGTGTGCTTCTCGAGGGACGAGCCTGTTGCCATGG
AAACAGATGGAGCTCCACCCGCCCGTTATGTACAGGATAACTTGCGTCGC
CATGGCGATGATGTGGGAAGGATGTTGTTGGATGAAGGAGCTGTGCTATT
TGTTTGTGGAGATGCCAAAAACATGGCCAAGGATGTGAATGAAGTCATCA
TTCAGATTGTGCAGAAATACAAAGATTGTACCATCCAAGAGGCTAGAAAC
ACAGTCTTTCAACTCAGACAGGACAGACACTACATGGAGGATATCTGGAC
TTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000433-exon-Sc0000000-1564993656:3290202..3290233 | BlTCONS00000433-exon-Sc0000000-1564993656:3290202..3290233 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3290571..3290640 | BlTCONS00000433-exon-Sc0000000-1564993656:3290571..3290640 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3291004..3291092 | BlTCONS00000433-exon-Sc0000000-1564993656:3291004..3291092 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3292018..3292198 | BlTCONS00000433-exon-Sc0000000-1564993656:3292018..3292198 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3292748..3292791 | BlTCONS00000433-exon-Sc0000000-1564993656:3292748..3292791 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3293316..3293529 | BlTCONS00000433-exon-Sc0000000-1564993656:3293316..3293529 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3294213..3294331 | BlTCONS00000433-exon-Sc0000000-1564993656:3294213..3294331 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3295029..3295121 | BlTCONS00000433-exon-Sc0000000-1564993656:3295029..3295121 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3295942..3296133 | BlTCONS00000433-exon-Sc0000000-1564993656:3295942..3296133 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3296561..3296625 | BlTCONS00000433-exon-Sc0000000-1564993656:3296561..3296625 | Branchiostoma lanceolatum | exon |
| BlTCONS00000433-exon-Sc0000000-1564993656:3297112..3297199 | BlTCONS00000433-exon-Sc0000000-1564993656:3297112..3297199 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3290202..3297199 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000226 |
|
