|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3279510..3284865+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000428 ID=BlTCONS00000428|Name=BlTCONS00000428|organism=Branchiostoma lanceolatum|type=mRNA|length=5356bp|location=Sequence derived from alignment at Sc0000000:3279510..3284865+ (Branchiostoma lanceolatum)
ACCAAAATGGCAAACTGGACAACATATTTCGAGGGCTCGAACCCTCCGGA
AAAATACGACGAAAACAGGACAAGGATCCAGGAATTCGTCAGTAGACACT
CAAAGGAAGGACGAAGACTTGTCCTCGTAACTGTACGTATGGCTGTTGTA
TCTTGATTTTGACGAATTCGGAACAAAATTTTAGTCTTTTCTTTTGGGAG
ATAGGGGGCGGGGCATTGGGCAAACATAATTATTTGCGCATTCTACTACA
TGGCACTTTAGTATACCACAACTTCATACGTGAATGACGTCAGATTTAAA
CAGCTAGTTTGCATGTACGTGATTGCTTTTGCACTGTTTATGGTATCCAG
CGCATCACCCTCTTGTAATTAATACAATTTCATGCATAATTTCTTTGTAG
TTGCTAGTAACACAGTCTTGTGTGACCTTACTCTCCAAGCACAGGTTAGG
CCCCGGCTAGCTTGTTTTGGACGTCATTTTTTGTTGGCCTCTCTGGTAAA
TTTAAAGAAAAGCTGACGAAATAGAAAAGCCAACAAAAAGCTACTTTTTT
CTTAAAATCACAGAACCCACAAATTCTAGAAAAAGTGGGACTTTTCGTCT
TCCACTGCCTCCAAAAAAGAAGTCAAACCCAGCTTGTCTAGATGTAGCCA
ACAGTCGTATTTAGTATTAGTACTCTATTGTTACGACAAAGTCAGTAACT
GCCACATGTATGTTTTCCCCTATGTTTCTACAATGTATTTCCAATGAGCC
CAGGGGCAGGAACTTACAATAAACTTTATTTGATAATTCCAGTCAGGAGG
TACCCGAGTACCACTGGAGAGCAGGACAGTTCGCTTCATCGACAACTTCA
GTGTGGGAACAAGAGGCTCTGTCTCTGCCGAGTATCCTCTTTTGTGTATC
ATAAAGTTGTTTTGTGCCAGACATACATGTAAAATGTTTATGTCCGACAA
CACCTCATGTTTAGTATCCCCTTTGATGTTTCTATCAGCAAAATCTTTTT
GAAAATTCCTGTCTGATACAGGTACAGGTCAAGTATTTAACAAAAACTAT
GTGTTATTGAAATCAACCCTGACCATATACTAATAGTATTAGCATAGTAT
TGAAAACATACACCATGACCAACAATAATATATTAAGTATCAAAACCATG
TCACTTAGGATATTTTCCTTACAGTAATGCTGTAAACAATGTATTCCCAA
TATATTGTTACTCTATATTGTTAAAAGGAATATTAGAACATAAGATGCAG
TTATTGTAAAACTTTCCTTGACTGCTGTTTTCAGAAATTTTTTGGCACAG
GGTTATGCTGTGATCTTCCTGCATAGACTGAACTCCCTGGAACCCTTCAC
GAGACACTTCTCGCGAGTCAACTTTCTGGACCTTCTCAGTCTTACAACCA
CTGCAGATGGCAGTACAGGTGTACAAGGTACTGACAAATATATACCCTGG
GCGCCAGACTAGTACCGGGTCGCTAGCGATTTCCTTCGGTGGCCCAAGAA
CAGCCCGCCCGCCCGGTCTTAATCAACGCTCCGGGGAGTTGAGCCTGTGG
GAGTGAACCGCGCCCCCTTTGGTAGGGCCAGTCAACTCCCCGGCTAGAAA
TCCCCCGGTGCGCTAATTAGGGTTCTGCGGGCTGGGGTCTCTGTGCCACC
CGAGGAATTGGCTACAAGGTACCGGCTAAAGGGAACCGGCTAAAAGGCCC
GACAAACAGTCCGGAACCCAGGGTAACAGATATACTGTAAATGCATTGAA
GTTTGCGGTGGTTTTATGTTTGCATTTTTTGCAGTAAGCTCCTCGCCGCA
AAGTTAAAACCACTGCAAACTTTTTTGCCCTCCCACCCCATTGTCTACTT
TCCTCACTCCACCCAGGTGTAAATGGGTACCTGACTTTGATTGGGGAAGG
TCATATTAAGGTCACCTGGTGGCGCCGAATGGCGACAGTTCCACAAAATG
CAAGTGTGGAGCAAATAGTTCCTAGTATCTGTTGCCCATGTGTATTATGT
GATTGTAAACCCGGCACCAATTCAGCACTAGAAAGGCTGCCATTGCATGG
GTAATTTTTGACCAATTAAAACCATTATTTTTATTTCCCACAGTTGATCC
GCAGCACACATCAAAGCTTGTTCGTGTCATGGAGAGATACCAGAAGGAGA
CCGACACCCTCCTGTCAGTCAGCTTCCTGTCCCTGTCTGACTACCTGTAC
CTGCTGCGAGCTGCAGCCAAGGCTTTCAGCCACATCGGGCCGGCCGCTAT
GCTCTACCTCGCCGCTGCCGTGTCTGACTTCTACATTCCACACAATGAGC
TTGTAAGTCATATGTAAGAACAAAGCTCTCATAATCAATGCAAATTTAGT
CCTAAAAGGAATCTTATAATCAGACAGGTAGGATGGCAATGTCAGCTAAC
AGTGAAGCATACTGTGCTCTTACCATGGAACCATCTCTGTAGGTAGTAAT
CATAATACAATTCTTAACTTTCTTCCAACACTAAGGTATTCACGGATCAA
ATTTTCAAGGACCACTGTCGCCTTTTTCAGGATCACTAATGACCAATCAC
TACCAAACGAGAGTTACAGACATGTGACTTTATTGACACATGTCTTTACG
GATACGTGACGTCAGTAATTGGTCAAACGTGCCAGGAAGTTTAGAACGCC
CACTGTCTCTCTTAAGTGATGGGTGGAGTGCCCTGATGTGTATGGCCTCC
TTTATACCTCTCCTAAATACTGCACTCTTGTTTCCTCTTACAGCCAGAGC
ACAAGATCCAGTCAGCCAATGGTCCTCTACAAATCACCATGCAGATGACA
CCCAAGATGCTGTCCCCACTGGTTAAGGAGTGGGCGCCGCAAGCCTTTAC
CGTCTCCTTTAAGGTATGTGTATTTATTATGTATTCATTGAGAATAAGAC
AATTCATTACAAGTGGGTCAGCCAAGGCAGCTCTCGATGGTAACGGCTGA
CCCACAAAGGTGCAGTCACAAGTATTGTTGTGCCTGTTGCTCACTTTCAA
AGCACCTTGCTTCTATGGTATGTTTAAAGGTGCTTCCCGCATTTCGCTTT
GGTCCCCATCTTGTAACTGTAAATCATTGTGTTGTCTATATTTGCTATAA
CATACATGATTTTTTGCATGTTTGAGGTACATGTACTTTTCCTTACTAAG
TTGAAGGTCTCTCTCTCTGACTCTCTGAGTCCCTCTGACTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGATATCTCTCTCTCTCG
ATTGCTCACTGTCTCTCTCTCACTCACTCTTACAGGTTAGGTTAGAAATA
GGCCATGTAGCAATTTTGGATGTGAATGTACTTGTGTACATTCTATGCTG
AAAGCTCAGTCACAATAGATACAATTTGTAGCTACAACTACTATCCAACT
CATAGCTGTTTCTTATGTATTTGCACAGCTCGAGACTGACACCAGCATTC
TCATCAAAAAGGCAAAACAAGCTCTGCAGAAGTACAGTCATCAGGTACGA
AACTTACAGGAAAATCTTGAGTTTGTTTATAGTAAATAGCTATTGGTTAA
CAAGAGTTCTCTGACGACAATCGTGACATATTAACCTGCAAATGTTTTGG
CGATGCTGACTGGTTCTATATCCCACTGTCAGATGGCGCTGCAGTGGCTA
GGATGGGACTGAGCTTGTGTTCCCCCTCATCATAGTTCATACTTATTGCC
AGCATTCTATACACATATCTAATATAGAATCAGACTTCCATGGTTTCAGA
GCTTTGAGATTTGTTCAAAAATTTGCATTTTCCTAGACCTATATCAGAGT
TGAATTTGTATTCACTGGATTGGCTTTAAAAAACACTTGCAGCTAGATGT
GCAAAAGTTAGGTGTGAAAGGTTGTTCAGTGCAATATAACCAGCTGCTGC
TGCGCTGCGTACCTGTGAAGCTGGTGTGCTACGCATTCAGAAGGGCAGTT
ATACCTGGTAGTCAGATACAGATACTTTCACAAGTCATAAGGTCATTGTA
TGTAACTTTCTATATCTGAGAGCATTACACATTGTATTGGGATGAGTCAA
CTGCTATACTTCTAAAATCTAACAATATTTCAGGTTGTCATTGCCAACAT
CCTCGAAACGAGAAAGAAGACCGTAACCATAGTAACCAGAGACGAGGAGG
AGGTGGTACTGATGTCAGACTCCGAGCTTGATGCAGGGATGGAGATAGAG
GAGAAAATCATTGCAGACCTGGTCAGAAGACACCAGAAATTCTGTCAGGG
ATCGTGAGCAACTTCATAGAGTTTTCATGGAAGCTCATTTGTGTTGGTAG
TAATCATAGTACAATGTTAAATGTTCTTCTAACACTAAGGTATTCACGGA
TCAAATTTTCAACGACCACTTTCGCCTTCTTCAGGATCAGTAATTCCTGA
TCCTGAAGATGGTGACAGTGGTCGCTAAAAATTTGATCCGCAACATCAGC
TTGTCTGCCTGGCACTCCCAGTGTCTTGTTACAATTTTTTTAATAAAGAA
TACCTTAGTGTTGGAAGAAAGTTTAGCATTGTACTATAACTTCATAGAGT
TTTATTTTGTTTCCATAAACCTTTGTTTAAGACGTGTCATATTAAAATAG
CCGGTGATTATTTAGATCAATGAAATAAATAACAATGCCAATATTGTCTC
AGTATAAAGTACATGTACTTGTAGCAAATGAGACAGGCTTGTTGAAGGAT
TATTTGTTGCAGACTTGGTGGGCATGATGAGATTAGTATTCTACATTGAG
ATTCCTTCAGAGTTCTTGTTTGAAAGTTGATTTGTCTATCACATACAAAA
ATGTGCATTGTATTACTAATGCAATAATGATGAACAGCATATCTCTTACT
TTTTCATAAACACTTGTCTTGCAGTTCTAACCTTTTATACATCAGTGGAC
ATGTACTAATGTATCATATGCAGAAACAGAGAAGAAAGAAATTGGTTGGA
AATGAGTAAAATCGACAAGGACATTGTATAGGATAAGTCCTTGGAATCAG
CACCCTCTCTGTATACTAGTAGTGTAGATTTTCTACATAATGCAGGGATG
TAAATACCAAAGTACATGTCCTGATGTTAGACAATGTGCCAAGCCATCAT
TTTATCATATTAATATTCATTAATTGTAGTGCATATGTTGCATTTATTCC
AACAAAAAGTTAAGAATTGCAGATGTTCATTCCTATTGAATTAAAGGCAC
TACAAATATAGATGACACTGATGGTCTGTGTGTTTTATTTGTAATATATG
AATCCAAGTAGGTTTAACCGCCTTGATGATTTTAAGACTTTCATTGAAAC
AGAAGTTCATTACTGTGAATCCGAAATCAACTTTGTCATATTAACGACTG
TCATAC Coding sequence (CDS) from alignment at Sc0000000:3279510..3284865+ >BlTCONS00000428 ID=BlTCONS00000428|Name=BlTCONS00000428|organism=Branchiostoma lanceolatum|type=CDS|length=933bp|location=Sequence derived from alignment at Sc0000000:3279510..3284865+ (Branchiostoma lanceolatum)
ACCAAAATGGCAAACTGGACAACATATTTCGAGGGCTCGAACCCTCCGGA
AAAATACGACGAAAACAGGACAAGGATCCAGGAATTCGTCAGTAGACACT
CAAAGGAAGGACGAAGACTTGTCCTCGTAACTTCAGGAGGTACCCGAGTA
CCACTGGAGAGCAGGACAGTTCGCTTCATCGACAACTTCAGTGTGGGAAC
AAGAGGCTCTGTCTCTGCCGAAAATTTTTTGGCACAGGGTTATGCTGTGA
TCTTCCTGCATAGACTGAACTCCCTGGAACCCTTCACGAGACACTTCTCG
CGAGTCAACTTTCTGGACCTTCTCAGTCTTACAACCACTGCAGATGGCAG
TACAGGTGTACAAGTTGATCCGCAGCACACATCAAAGCTTGTTCGTGTCA
TGGAGAGATACCAGAAGGAGACCGACACCCTCCTGTCAGTCAGCTTCCTG
TCCCTGTCTGACTACCTGTACCTGCTGCGAGCTGCAGCCAAGGCTTTCAG
CCACATCGGGCCGGCCGCTATGCTCTACCTCGCCGCTGCCGTGTCTGACT
TCTACATTCCACACAATGAGCTTCCAGAGCACAAGATCCAGTCAGCCAAT
GGTCCTCTACAAATCACCATGCAGATGACACCCAAGATGCTGTCCCCACT
GGTTAAGGAGTGGGCGCCGCAAGCCTTTACCGTCTCCTTTAAGCTCGAGA
CTGACACCAGCATTCTCATCAAAAAGGCAAAACAAGCTCTGCAGAAGTAC
AGTCATCAGGTTGTCATTGCCAACATCCTCGAAACGAGAAAGAAGACCGT
AACCATAGTAACCAGAGACGAGGAGGAGGTGGTACTGATGTCAGACTCCG
AGCTTGATGCAGGGATGGAGATAGAGGAGAAAATCATTGCAGACCTGGTC
AGAAGACACCAGAAATTCTGTCAGGGATCGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000428-exon-Sc0000000-1564993656:3279510..3279641 | BlTCONS00000428-exon-Sc0000000-1564993656:3279510..3279641 | Branchiostoma lanceolatum | exon |
| BlTCONS00000428-exon-Sc0000000-1564993656:3280302..3280390 | BlTCONS00000428-exon-Sc0000000-1564993656:3280302..3280390 | Branchiostoma lanceolatum | exon |
| BlTCONS00000428-exon-Sc0000000-1564993656:3280794..3280936 | BlTCONS00000428-exon-Sc0000000-1564993656:3280794..3280936 | Branchiostoma lanceolatum | exon |
| BlTCONS00000428-exon-Sc0000000-1564993656:3281603..3281811 | BlTCONS00000428-exon-Sc0000000-1564993656:3281603..3281811 | Branchiostoma lanceolatum | exon |
| BlTCONS00000428-exon-Sc0000000-1564993656:3282253..3282372 | BlTCONS00000428-exon-Sc0000000-1564993656:3282253..3282372 | Branchiostoma lanceolatum | exon |
| BlTCONS00000428-exon-Sc0000000-1564993656:3282938..3283003 | BlTCONS00000428-exon-Sc0000000-1564993656:3282938..3283003 | Branchiostoma lanceolatum | exon |
| BlTCONS00000428-exon-Sc0000000-1564993656:3283593..3284865 | BlTCONS00000428-exon-Sc0000000-1564993656:3283593..3284865 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3279510..3284865 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000224 |
|
