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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3237953..3243807+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000423 ID=BlTCONS00000423|Name=BlTCONS00000423|organism=Branchiostoma lanceolatum|type=mRNA|length=5855bp|location=Sequence derived from alignment at Sc0000000:3237953..3243807+ (Branchiostoma lanceolatum) AGAACACGTGCACACGTGTAAATATGTACGAGTTACCGCCTTAGACCATC
CCTACCCTGAAGCTATGTAACCCCTGGATTGCATACCTGAACGTATGTAA
AGCCGGGGACGCGTCGGTTTCTGACATTTTCACGTTGGGATCAGTCGACG
ATAGACGTACACGGAGTCGGTGCGCTTCGGGGATCCCACCATGAAAGCTC
TGGGCCTTCTGATCGTGCTGGCGGGATGTTTCTGCAGCTGTGACGCTCAA
TTCCCGCGGGTGTGCACCAGGGATGACTTGCTGGCTAGTAAGGAGTGCTG
CCCGATCCCGGATGGTTTCCCCGAGCCGTGTGGCGGACCCGGGCGGGGTC
ACTGCGCCGACACTCCCGACCTCAACGTGGAGGACCCCGCCTGGAAGAAC
ATTAATGCCTACAAGGTTGACGACAGGCGTCACTGGCCGACAGTGTTCTT
CAACAGAACCTGCGAGTGTGAGGGCAACTTCAGCGGGTACGACTGCAGTA
AGTGCAAATGGGGATATCGCGGGGAGAACTGCGACACGAAGCAGGAGCCC
GCTGAGCGCAAAAACATCAAGGGTCTAGGCCTCAAGAAGATAAAGCAGTT
CCGGGACTACTTTGACAAAGCGAAGAACACTAACAGCGACTACGTCTACG
CTATGGAGTTCAAAGATAACATCAGGGGAAGCGAAGACTTCGGCAACGTC
TCAGTTTACGACCTCTTCGTGGCGACGCATTACTACGCCAGCCGTGCAAC
CATGCCGCCCTCCATTACAGGTATGTAACGTTATAATGATTGGTTTGTTT
CATTATTTCCACCATACAAACTGGACAGATTCGCACTGCAACTATGGATC
AAATTGATCAGGTGCTCAGGTGTCAACATCCTATCAATTATTAAAGATCA
TTCACCATATTTTGATAGACGAAAACTCACAATTATTCTACATAAACTAC
AAAATAACACCGCTCGTATTTCAACTAAAAGGCCACACCGATTTGATTTT
TTGGATGACATCCGCACTCCTACCGATTTCTACCGTTTTTTACAACAAAA
AAAAGGAGAGGAAATAGTGCTGTCCTTGGAACTACAGGCAAGGATTTTCT
GTAATAACGAGGTTGAATCTAGCCTGGGTCCCAACCTTGTTAGTATATCA
GGGCTCCTATACGCCCCTAACCCTCAGGCTAGGTGGAATCATCATCGACT
ATGTCACCCATGTTGGGCAGCGCTGGGTTGATTTCAATCAACGGTAGTTG
GCGTTTATTCGTTGCGTTTTTCAGTTAGAGTCAAGTGACACCAATCTGGC
AAAAGGGTAGACCATAGTTCCTTTCTGTTACATGGCGATACTATAGATTT
GCTTGTCATTTGCCACTAGCATATGCTATCAATGCCCCTGTGTATAAAAA
CAACGAATATAAGTACACAACGAATAACAGTCAGCTAACGATAAAGCTAA
CGATTCTTTGAAATAATTTTTTGCACTCACATCATTGATCATATCAATTT
GAGGTGTCCAGAGATTAAGTCAGTGTAGTCTTAGCCTTGTATCCAAACCT
ATCATAGCTACGAGAGAGGACAATATAGACTCGGCAGCTGTGATATGTCT
GGACACCAGGCTAGCGGGGCCTAACTAAGAACAAATTAACATTACATTTA
ACGGGTATGATTTCATTCGTCATTCAAGTACAAATTGAATTTCTCCAACT
TTAATATCAAATCCAACAGGCATCTGTGACGATGGGAAGGATTGTTACCT
GGACTTCGCGCACGAAGGTGTCAGCTTCCCCACCTGGCACCGTGCGTTCC
TTCTGGAGTTTGAGCGGGCTATACAGGAGGCGAACAACGACCCTGACTGG
ACCTTACCGTACTGGGACTGGGGCGCGGCGAAGGATAACCAGTGCGACAT
CTGCAACAACGAGTACGTCGGGAAGAACGACGAGAACCGCAAACTGGACG
AGGACTTTGTCTTCGGGAAATGGAAGATTATCTGTGCTATAGCTACCAAA
TTACCGTGGGAAAAAGCCACAGCCAGGAACCACACCAAGCCGTGCAATGT
GACCAGACACATGGGAACGTTGAGGAGGAGCCCCGGGACGCAGGACCCGA
ACAACCTTGGGGAGTCGATGAGTCACCTGCCCCTGCCGACTGAGGTGGAC
TTCGCCCTGCGTTTTTCCGAGTACGACACGCCTCCTTACACCAGGAAATC
GAACTGCAGCTTCCGGAACCTACTGGAGGGGTACGCCGACACCGAAACTG
GCATGACCCGGGATACCGAGTGAGTAGATTCATTAATACTTTTTGTCAAC
CTTAGTTTTGTGCCTCACGTTGTCGCTAAGCCGTAAAAGTGCAGCATGAT
GGAGATGATAAGTCAACCATTCAAATGCATGAGGTTTACTTTTTGTCAAT
TCAAACTAAGGAGATGAATAAATGTCAATACGGGGCGTCGTAATTCGTGC
TTTAAGTAGAACTGGCAACTTGTAGATATGGTAACAGTACGCGCCGTAGC
GGCATTTTAACTAAGAAGGACTCGGTGAATGAAATGGTCAGTATGAAATG
TCGTTATTTGGGAGTGAAGTAGATCGACGGCCCTAATGGGCGTGTCTGTC
TCAAGGCTGCGTCCGGCCCTGCTGTAATTCTTCTCATTTTACTCTTTCTT
CGTTTACTTCTTCTTTCACATTAACTAACTACTAATCTTAAAAAGACATG
AAGAAGGCAAAAGATTCCTTTTGCTTCCAAATATTATTGGTCATGATTAA
GTAGGTTTGTCTCGTCCATGTCTAACTGCCACGTCCTGAGGGCAAATCTA
ACTTCGTAGTCTCTGTCGTCGCGTGATCTCAAATGTGCATTTCATTGGAA
ATAATAGGCAAAATTAGAGGTCTGCTACCTCATGCATTCGGCAAATGACG
TTAATCTTTACAGTTGATGTAGTTCAAAGGTTTCTAATTGGTATTAAAAA
CAAACAGGTATTAATTTACAAAGTTATTCAGTTAATTATCTTCTCTACCC
AAGTGACACAAGTTCTTGAAGGCGGATGTGGCATTGTTTCTATCACCTGT
ACAGCTGACGTCCTGTTTTGCTTGATTTATGGCTAATAATGGCACCTCAG
GCTCCTTAACAGGCTCCGTGAGTCGTTTTATGCAAATTAGATCCGGATTT
ACTTATAACGTCAATCATCAAATAAAGCTACCCAAATATCACGATGATTC
GTCCGTACACTTTCTTGGCTTTTAGATTTTTATAAAAATGACCCTGAAGT
TCCAGGTATGACCTTAGAACTTGACCGTACATCTGCAAATGTCCCTGTCT
GTCCAGCTATATCATGAATTGTGTGAATATCACTGAACTCTAAATTACCC
CTCCATGCTCAGAAAATTCGACAATGGCACAGTAAAGGTCCATGGAGCTC
ACACTCTGCACAACCAGGTGCACATTTACATGGACGGCACGATGAGTGAC
ACCCCCTTCGCGTCAAACGACCCCATCTTCATGCTGCACCACTGCAACAT
CGACCGCTTGTTCGAGTCGTGGATTCGCCTATATGGGTGGGTGTCCTCCA
CTTAAGGAGCAACTTTCCATTTCATTGTCGGGCACAGGGGTGAATGTTGT
GTCTACTGTTTCTAATGATATTTGTTTGTTATCTTTATTCTCGTCTCAGC
CGAAGAAAGTTTGAATTGATCGATTGGTTGATCGATCGATTGATTGATTG
GTTGATTGGTTGATTGGTTGATTGGTTGATTGGTTGATTGGTTGATTGGT
TGATTGATTGATTGGTTGATTGATTGGTTTATTGGTTGATTGATTGATTG
ATGTGTTTATTTGTTGACTGATTGATTGATTGGTTTGTTGGTTTATTGGT
TGCTTGATTGATTGATTGATTGATTGATTGATTGATTGTTTCATTATCCA
GCACCCCTGCCTCTGCCCTGCCAGTGAAAGGTGCCCCGCCGGGCCACAAC
CGCTATGACCACATCGTCCCGTTCTTCCCACCCTACAGCCACGCCAGCAT
GTTTAAACTGTCCACGGAGTTTGGCTATGACTACGAGGATCTTATCGGTA
CGTTTTGTTTGCTACTGATACAAATTTTGTTCATGCGTCTTTACTTTCAA
CCTGACCAAACTATTCAGCTTACAACTGACTTGACGTTAGTGTGACGTAA
GCAACAGACAAAGTTGGTTCATGCTAATTATATTCATGTGCATCCCATGT
AGAATCGGATGGAGGGAGCGACTTGGGAGAGTGCAGCTCACCAACGCCAG
AAGGCGTGTCTCCGGGAGTGATCGGAATGGGAGTTGGCATTGCGCTCGGG
CTTCTGGTTGTAGTCACGGTCGTTGCAATTCTGTTGTTTATCAAGTTCGG
TCCCAAAAAGCCACAGTATCTCGCCGCCGACACAGGCATGGGGATGTCCG
AGCGGACATAAGCAGTGGAATTTTCACCAGGCATTTTTCAGGCCTTAAAA
TTCTTCAAGCAGATGTTGGGGTGAAAGATGGCCAAAGATTGTATTGGTTT
ATTGGTTTATTGAGAAAATCCATTAGTGATGTGCCCTAAGGCACACCGCT
AATCTTCCTGGACTTCTAACATCACAATAAATACATGTATGATTTTCTGA
TAGCCGGCCTTTTCTGATTACCATAGAAAGCCATTAGAAAATGCTAAATT
CACCCCAACGTCTGCTGGAAGATTTTGTTGAAAAAAAGGCTTTCATAAGA
TATCAACGCACAGCCTTAACTTATGTCCGCCCAATTAGATGTCTTTATTC
TCAAATTCTTTTCAGAAAATAAATAAAGTGGGTGGGTGGGTGGTTGGATT
TTTGAGTGAAACAAAAAAAAGAGTTCTAATACTTGAAATACTTGAAATAT
TTTTCTGTAAATTTTCGGACATACGGAGCACCCACAAAGGCAGTTTCATT
AAACGAATTGAAATCGTCAGAACCACAATTGCAGTACAGGGTACTACATC
AATCTTGTTGACAGATTGTTTACAATATAGCCTGACAGAGCAGACAAAAG
TTAAAGAAGAACTTTATTGCATAACAATTTTACACGGTACAATGTGAGGC
GACAACTATTAAACCTAGTACAAAATAGAACGAGATGTACCCAAGTTATG
TAGATTATGAGTAAAAAACTTAAAGTAGGGATTGCTTTGAGACTCAATCT
GGAAATGAATTAATGATAGAATGTACAACGGACAGACCAAGCACAGGGCT
TCATAGGTAAATCCACATCATGGTGACTTAAGAATGACAAGTGATAGCTT
GATCAAGGGCTTAGCGTGGTAGCATAACACCTAGAGCTACATAAACTACA
AAATGTATGTTATAACTGGAGTATCTCGTATCACTACTAGACTAGAGTGC
TTAGCGTGGTATTAATGGCTGATAGGGAAGATAAATCGTGGTTATACAAG
AATAGAAGTATCTACCACCCATACTTAGCTATGTATCGTCACGAGACTTA
TAAGCGTTGTTTTAAGTGTGCTTAGCATGGTAGCATTATGAGACAGGCTA
CATAAGAATAAGAATATATACTAGACTATGCATCGTCAGGAGTGTTGTTA
AAGGGCCTGTGATAATCTGGGGAGGGGAGGTTAGAACTGAAACTAGAAAT
ATTACAGATAGAAGAAGAAGAACTTTATTGCGCGACAATTGTAGCTGGTA
CAATGTATGGCAACTTAAGTACATGAGAATTGAGCTATTGCTAATTGTGG
ACAGATGTAGAGAATCTAGATAAGAGGGACATTTGCAAGGTACTAAGGAG
ACCTGTACATTTATTGTGGGTGGGGTACTTTCAGGGGGATTACAAACACC
CCATTCCCCACGATACGTTCCTGGTCCACTCCTGAAAAAAGAATAAACGG
TGAAA Coding sequence (CDS) from alignment at Sc0000000:3237953..3243807+ >BlTCONS00000423 ID=BlTCONS00000423|Name=BlTCONS00000423|organism=Branchiostoma lanceolatum|type=CDS|length=1659bp|location=Sequence derived from alignment at Sc0000000:3237953..3243807+ (Branchiostoma lanceolatum) ATGAAAGCTCTGGGCCTTCTGATCGTGCTGGCGGGATGTTTCTGCAGCTG TGACGCTCAATTCCCGCGGGTGTGCACCAGGGATGACTTGCTGGCTAGTA AGGAGTGCTGCCCGATCCCGGATGGTTTCCCCGAGCCGTGTGGCGGACCC GGGCGGGGTCACTGCGCCGACACTCCCGACCTCAACGTGGAGGACCCCGC CTGGAAGAACATTAATGCCTACAAGGTTGACGACAGGCGTCACTGGCCGA CAGTGTTCTTCAACAGAACCTGCGAGTGTGAGGGCAACTTCAGCGGGTAC GACTGCAGTAAGTGCAAATGGGGATATCGCGGGGAGAACTGCGACACGAA GCAGGAGCCCGCTGAGCGCAAAAACATCAAGGGTCTAGGCCTCAAGAAGA TAAAGCAGTTCCGGGACTACTTTGACAAAGCGAAGAACACTAACAGCGAC TACGTCTACGCTATGGAGTTCAAAGATAACATCAGGGGAAGCGAAGACTT CGGCAACGTCTCAGTTTACGACCTCTTCGTGGCGACGCATTACTACGCCA GCCGTGCAACCATGCCGCCCTCCATTACAGGCATCTGTGACGATGGGAAG GATTGTTACCTGGACTTCGCGCACGAAGGTGTCAGCTTCCCCACCTGGCA CCGTGCGTTCCTTCTGGAGTTTGAGCGGGCTATACAGGAGGCGAACAACG ACCCTGACTGGACCTTACCGTACTGGGACTGGGGCGCGGCGAAGGATAAC CAGTGCGACATCTGCAACAACGAGTACGTCGGGAAGAACGACGAGAACCG CAAACTGGACGAGGACTTTGTCTTCGGGAAATGGAAGATTATCTGTGCTA TAGCTACCAAATTACCGTGGGAAAAAGCCACAGCCAGGAACCACACCAAG CCGTGCAATGTGACCAGACACATGGGAACGTTGAGGAGGAGCCCCGGGAC GCAGGACCCGAACAACCTTGGGGAGTCGATGAGTCACCTGCCCCTGCCGA CTGAGGTGGACTTCGCCCTGCGTTTTTCCGAGTACGACACGCCTCCTTAC ACCAGGAAATCGAACTGCAGCTTCCGGAACCTACTGGAGGGGTACGCCGA CACCGAAACTGGCATGACCCGGGATACCGAAAAATTCGACAATGGCACAG TAAAGGTCCATGGAGCTCACACTCTGCACAACCAGGTGCACATTTACATG GACGGCACGATGAGTGACACCCCCTTCGCGTCAAACGACCCCATCTTCAT GCTGCACCACTGCAACATCGACCGCTTGTTCGAGTCGTGGATTCGCCTAT ATGGCACCCCTGCCTCTGCCCTGCCAGTGAAAGGTGCCCCGCCGGGCCAC AACCGCTATGACCACATCGTCCCGTTCTTCCCACCCTACAGCCACGCCAG CATGTTTAAACTGTCCACGGAGTTTGGCTATGACTACGAGGATCTTATCG AATCGGATGGAGGGAGCGACTTGGGAGAGTGCAGCTCACCAACGCCAGAA GGCGTGTCTCCGGGAGTGATCGGAATGGGAGTTGGCATTGCGCTCGGGCT TCTGGTTGTAGTCACGGTCGTTGCAATTCTGTTGTTTATCAAGTTCGGTC CCAAAAAGCCACAGTATCTCGCCGCCGACACAGGCATGGGGATGTCCGAG CGGACATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000423-exon-Sc0000000-1564993656:3237953..3238722 | BlTCONS00000423-exon-Sc0000000-1564993656:3237953..3238722 | Branchiostoma lanceolatum | exon |
BlTCONS00000423-exon-Sc0000000-1564993656:3239672..3240221 | BlTCONS00000423-exon-Sc0000000-1564993656:3239672..3240221 | Branchiostoma lanceolatum | exon |
BlTCONS00000423-exon-Sc0000000-1564993656:3241315..3241488 | BlTCONS00000423-exon-Sc0000000-1564993656:3241315..3241488 | Branchiostoma lanceolatum | exon |
BlTCONS00000423-exon-Sc0000000-1564993656:3241854..3241999 | BlTCONS00000423-exon-Sc0000000-1564993656:3241854..3241999 | Branchiostoma lanceolatum | exon |
BlTCONS00000423-exon-Sc0000000-1564993656:3242155..3243807 | BlTCONS00000423-exon-Sc0000000-1564993656:3242155..3243807 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:3237953..3243807 + |
Properties
Property Name | Value |
GeneID | BlCUFF000220 |
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