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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:2939028..2946774+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000399 ID=BlTCONS00000399|Name=BlTCONS00000399|organism=Branchiostoma lanceolatum|type=mRNA|length=7747bp|location=Sequence derived from alignment at Sc0000000:2939028..2946774+ (Branchiostoma lanceolatum)
GGCGCACGGTACGACAAGGAGGTGATCCCGGCCAGAATCGACACGGCGAA
GGAGGCCAGGATGAAGTTCCTGCAGGGACAGGTGTCCAATGCCGAGCTGG
ACGACCGGACCCGCCAGGAGGCGCTGGCGGAGCTGGAGTCGGTCCGGTCC
GCCCGGCTACAGATGGAGGAGGTGCGACAGGAAGTCGGCACCAGGTAAGC
CGAACGAAAAATTACATTACCGTCAAAGCTAGTCTGAAATGTCAAACAAT
ACGACTAAGGTTTGCTAGCCTCCATAGCAAGCTCTCTGGGCCTTCTTTTG
GCTTTTGCTGATGACTTCTTTTTGTACTGGGTCGATTGTGCAGCCAGCCC
GTAACCATTAGGCCCAGTAGAACTGGCTTCACAAACGTCCCAGTACAAAA
AGAAATCAGCAGCAAAAGCCCCGAAAAATGCCCAGAGAGCCTGCTATTGA
GGCAAGGTTTTCCTGTGTATTGATGTACGTGCTTGTATCACCCAAATTCA
ACATTTCCCGATTACATTTCATTTGACAGGAGGTCGGCACCAGGTAAGCT
GAACGGACAATATGATGAAAGTTTTCTTAAGCATAACTATTAAACTATCT
CAGGACAGCAAAAGACTTTAGAATGAATTGTCCGGTATGTCATTTTTTCA
AAGGTAGGCAAGAAAATTTCAGATGATGCAACAAAGATGAAGCCATAGCA
TAATATGTTGGTATTATTTCTAGGTATAAAACTCTTTGTATGTCATTCCC
AGGTATGACAAGGATATTCCACCACCCGAGTGCTGCCAAGTCAAGAAGAT
TGGAGCGGCGAAGTTCAAAGAAGGAGACGTTCACAACGCCGAGCTGGACT
TCCGATCCAGACTCGAGGCAGAAAAGGTAGATGGATACATTTTAGATGCC
TTGAAACTACACAGTTAATTCATTTATCCATTATCCAGTGGGCTAAACTG
CATCCAGGTTCAAATTTCCGTTTTCTGCTTCGTCATCAGGAAATATTGGT
GGCGAGTTGGCGTAACGGTTATGGTGTTAAATGGGTACATCACTTCGGTT
GGGCAGGTAAAAGGCGGTGGAAGGGCAGGGATGGGCTCCGCCTTCCAATA
CCGTACCCTAGACAACAGTGGATTAGCAGCCCATTAACTTTACCATTTTG
ACCAACAGGAAATCGAGCGTGTTCTGGTGGAGCGGCAGCAATACGAGGAC
GAGGTACTTCCGGTGGGCACGGTGGTGGAGAGGGAGCGTGCGGACCTGGT
CTGCAAGGACGCCTCGCGACAGGTCAAAGGTCGATTCGTCAACGGAGTTG
TCGAGGACGAGCACGAGCATGACCCAGGCCTGAAGGAACGGGAGGAAATC
ACTGAGGTATTAATTTCTTCTGCTTTATGTCTAATACCGTGGCCTGGCAG
CTTATGCTAAGACAAGCGAAGCAGTCTATGTCAAGTGTCATCCGACACTT
GATGTTCTTCCACTATGTTCTACTTTTCTCCTGACAGCTTACCTTTTTTG
TTTCCCAATTTCCTCCCATTGTAAACTGTAATAATATTCTGTATTTCCTT
GCCTTTCTAGTTGCATAAGCCTCAAGCGTCAAACCTCTGCACGTAAAAGA
ACCCAACACACTAATCGAAAAAAGTAAGGGTGACCCGGTGTGCTTGGCCA
AAGAACGCGATGCCGCATTGCACTACCACTAGCTACTTGAAAAAGCTTCA
TGACTTCTTTACCTTTTACCTGCTTGTAAACTGTTTTTTTCCTCACCATT
TTTAGGAAATCCTGATGATCCGGCAGAGACAGCTTGAGGAGGAAGAGCGG
CTGATCAGAGAGCGGTTCGAGCGCGGCGAGATCATCAGCGAGGAGGTGAT
CCAGAGGCTGAGGGAATCCCGCAGGAGGATCCAGGAGGAGATCGAGGTAC
CGTTTGGCTCAGGTGTCAATCATGTCGCACAGAATGGCGCTCATTGGTTG
AGATCATGCCCGTACTGACCAATGAGTAACATGCTTACTGTGTGTACTCA
CTGAAAGGTTTTTTAAAGTGGTAAATTATGAGTTATGTCTTTGAGCGTCT
TCATACAAGATGACTACGATCTGAAACTCAATCTATACTATGGGTACCAT
ATGAGTTTTGAATAGAATGCACCAGGATACATGGAAAATAATCGACACAG
AAATCTTTTCACACCAACATTGCAGCCCTGCTCTTATTTTGTTGCAATGT
AAACAAACTCAATTCTACAATGATAGATTCAATTGCATTCTAGGAGGTGA
TAATCCTTACTGTGTACAGATAGGGATATACATCAAAGAATGTCTGGACA
TAAGAACAAGTATACAACACGTTAAATTTCAATATGTCACTCTATCCCAT
ATGATTGTATGTAAACAATATCATTCGTATGCACATATTTGTTTGTGTGT
GTGTATGTATGTGTGTATGTATGTATAGATGAAGTAGACCATACCATACG
AAATTCGTTGTACTTTTGTTGTGTTAATAAAGATTGTAAAGATTGATTGA
TAAAGAAAAATTTTGACATTTCAGGAGTACGTGCTGACGACTCCCACGGA
GTACCGAGTGGTGTACGAGTCTGAGCCGACCGACAGCGATCTGCCCCACG
AAGGCGACATGGAGGACGTGCCCGTGGTGCTCGGCAAGTCCCGGAACTTG
AAGCAGAGGTTCGAGAGCATTGGAGACGAAGAGGAGCTGGTCATCATGCA
CGTGCCGAAGGATAGGGTCTGGGTACGTGGTCATTAGTACCTTCGCTGAG
GAGATTATGTTTATATTTCACTCGACATACCATAGGTATGGGTAGAGTGA
AAAATATTGTTATATTTCACTCCCCATACGGGTAGAGTGAAATATATTGT
TATATTTCACTCCCCATACCATAGGTGTGGGTAGAGTGAAATATGTTGTT
ATATTTCACACCCCATACCATAGGTGTGGGTAGAGTGAAATATATTGTTT
TATATTTCACTCCCCATACCATAGGTATGGGTAGAGTGAAATGTATTGTT
TTATTTCACTCCCCATGCCATAGGTATGGGTAGAGTGAAATGTATACTTA
TATTTCACAACCCATACCATAGGTATGGGTAGAGTGAAATGTATACTTAT
ATTTCACAACCCATACCATAGGTATGGGTAGAGTGAAATGTATAGTTATA
TTTCACACCCCATACCATAGGTATGGGTAGAGTGAAATGTATTGTTTTAT
TTCACTCCCCATACCATAGGTATGGGTAGAGTGAAATGTACACTTATATT
TCACACCCCATACCATAGGTATGGGTAGAGTGAAATGTATAATTATATTT
CACACCCCATACAAGAGGTATGGGTAGAGTGAAATGTATTGTTATATTTC
ACACCCCATTCCATGGGTATGAGTAAAGTGAAATATATTGCTATATTTCA
CTCCCCATATGTGTAGAGTAAAATATATTGCTATATTTCACTCCCATATG
TGAAATATAATGTTTTTGTCCATGTTCTTCTTCTTCTCCGGGTAAATCTT
CAGCCGGAGGTATGGGTAGAGTGAAGTATATTGTGTTTTTTTCATGTTCT
TCTTTCTAGTTTGCGCAGCGTTCGTGTGTGTGTGTGTTTTAGTGTGTGCT
TGTGTGTGTATGTATGTATCTTTGTGTGTGTATGTGTGTATCTGTGTGTT
TGTATGTGTGTGTGTGTATCTGTGTGTTTGTATGTATGTGTGTTTGTGTC
TGTGTCTGTGTGTGTATCTGTGTGTGTGTATCTTTGTATCTCTCTCTGTA
TCTGTATGTGTGTATGTGTACATGTGTGTGTGTGTGTGTGTGCGCGCGCG
CGCGCGTGTGTGTGTTGTGCGTGTGAGTGTGTATCTGTTTGTCTGTCTAT
CAAGACAATTGCTCGAGATCGATCGTCTTTATATTTGGTAGGTGGGCAGG
TCTTGATGAAACATCGACATATTTAGATTTTGGGCCCCCTGGCGGCTTGT
TTATTTATTTCATCACAAGACGACTGACTTGCCCCTTCAACTTGTAAAAG
TTGATTTCCAAGGGCGCCCAGCTCATACAAGACAAGACATGTTTCCTTCA
GTGAGGAGACAAAAGTGGACAACATTAACTTTTCTACAGTGTTTCTCATT
TGTTACGCAAGAAAACAGTTGCACAAAGCAACTGAATTAATTTTGGAAAC
GGTCAGACATTTCAGGCACCACCCGAGAAACCATGGACGACACCCACGGA
GCCCAGGGTCTTTAAGAAGGTGACATATACCCCTGCATCTGGACCTGCCA
AGAAACACCAGGTAAGTTGCTGGGGGCAGTCGTAACAATAGTATTCTCAT
ATGCCATGTGTTAGAAACTTGGTGGAAGTGCATTGTATGGAACTGCGTGT
ATGCCGTAATTTGCATACACCGTACCTGAAGTGAGGCACCCACGTTGTGC
CGTGTTCATTTTAATGTAGATGAAAATGATTACGAAGTACTAGTAAGATT
CTGCTTTACTGTGTATGCAATGTTTACTTTGCTGTAAGTGTTTTGTCTTT
CTCTGTTGTTGCATGTCAGCGTTTTCATGCATTGTAACACTGTTGTAGAT
TTCTAGAAAAAAAAGTCTCAAATCTAGGATAGCTAGTAGCTACATCAGTT
AGAATAAGAGCTACTTTTAGTAGTAAAACGTTGTTTCAGTTTGCTGTTTT
GTAGTCTAGAGCGGCTATATACACAGCTAACCCGTACCTTGAAGAAACGA
TTTTTGAATCACTCTAACATAAAGGTGCGGGTTCGCTCTAAATGCAGGTT
GCTAAAGTGGAGATGGTACGGAGCGCCAGGGTTCAGTTAGAGGATCAGAG
CGGCCTTTCTGCGCACCAATTCCTCCCTCAACTCCCTCCCCGGAAACCGC
CCCCAAGGATCGAGCCGCCAAAGGTAAAAGCCCATGGCGCATCGCTGTGG
TCCATGCGTCAACTGAGTTGTTCATGGTTGTCCCAACATGCATGTTTTGT
TCTTTTTTCTTTCTTTCCAGTTTTGTAACTCAGACCTTTCAAGACATTTC
AGGATTGGTAGATAAAATGTTGAAACCTGCCATTTGTGTCTAAAAATATA
TATATATCTTTTACTCATGAGTTAAACTTCTAAGAAAGAGTGAGCGCATG
CGGTTTGTCTTGGACTCTATATGGACCTACGATGTCGAACAATAAAGTGA
TCCAACAGTTTAAAGTACAGATAAATGAATTCAGAATAAAGCACATACAG
GACAAGACATGTTACATTCAACCAGGCGACAAGCGTGGACAAAATTCCCT
TTTCTACAGTGTTTCTCATTTGTAACGCAAGAAAAGAGTTGCACAAAGCA
ACTGAATTGATTTTGGAAACGGTTCAGAGGTTTCAGGTACCAGCCCCCGA
GAAACCAGTGACGCCACCCCCGCAGCCAAAGCCCAAGAAGGTGGACTTTA
CCCCTGCGCCCGCACCCCCGCCTCCCAAGAAACACAAGGTAGATTGCTGG
TACAGCAGTCGTAACAATGGTATTCTCACATATACTGTGTTAGAAACTTG
GCGGAAGTACAGGGTATGCAACTACATGTATGACGTGATTTGCATACACC
ATACCTGGAGTGAGGCACCCACGTTTGGCCGTTGAAGTAAGATTATGCTT
TATCCTCCCCTCTAAATTTCCAACCAATAGATGCTGTATGCCCCAGTTGT
TCCATGGACGTTGAGTACCCACAGAAAAAAAATGATATTAATGTAAACGC
TTTCAATGTTGTAATGTCGCTTTGCCCGCATTTTATATCGTAGATATGTT
TAATCTGTGCATCAGAACACAATGTTGCTATTCCTTGTGCAGTGTTTGCT
TTGCTGTATGCTGTTTTGTTTTGTCTTTGTCCCTTGTTGCATGTCAGCGT
TTTCATGCTACAGTTTTGTAGATTTCTAAAAAAGCCTCTTCTTCATATAT
CTAACACTATATCCCTGTGACGTCATGTATCTAAATCCTGACGTCACAAG
CTAACTGATACGTTGGTAGGAACGCAATAACAAGAGCATGTCATGAGAAA
ACATTGTTGTAGCTGACATTACGTTGTCCAAATATGTTGCCATTGTCATA
ACTTCACTAACACTATACACAATATTTTTTATGAATTGGACAATCCAGCA
TCTGTAGATGTGCTGTTGTGAAACAATTTATTCATGATCAAATCTAGGAT
AGTTTGTAGCTTCATCGGTTAGAATAGAGAGCTACTTAGTGGTAAAACTT
AGTTTGGGTTTCCTGTTGGTTTGGTAGTCTAGAGCGGCTATATACACAGC
TAACCCGTACCTATTAGAAACGGTTTTTCACTCACCTATGGTTTGGGGAT
TTTCGAGTTACTCTAACTCACAAAAAAAAACCCAAAAAAACAATAAAGGT
GCGGGTTCGCTCTAAATGCAGGTTGTTAAAGTGGAGATGATAAGGAACGC
CAGAGTTCAGTTAGAGAAGCCAGGTGGTCAGTCTCCGCATCAATTCATCC
CTCCACACGCTCCCCCGAAACCACCCCCAAGGATCGAACCGCCCAAGGTA
AAAAAACCATGGCGCATCGCTGTGGGGGATGCGTCAACCGAGTTGTTCTC
ATGCACGTTTTTTTCTACTGTTTTCTTTCCAGTTTTGTTACTAAACCCTT
TAAAGACATTTCAGGATTGGTAGATAAAATGTTGAAATCTGCCATTTGTG
TCTAAAAAGATATGTATCTTTTACTCATGAGTTAAACTTCTAAGAAAGAG
TATGAGCGCATGTTGTTTGTCTTGGACTATATATTAAATGGGCATGGACA
TACAATAAAGTGATCCAACAAATTAAATACATATAAATGAATCCTGTGTT
TTCTCTGCTTACTCTAGAGGTTTCTTTGTTCTTTGACGACCGAAACGTTC
TCTGACTTGCCAGGAGAACAACAAAAAATGACAGCAAAGAAGTGTTTTTA
TGAATCTTAGTGATGTTTTTTATCATCCAAAACAGGTGAAGTTTGAAGAG
CCAACCCTAGTGCCCGCGGCTGTGCCACGTAAGGTGACCGTGGGTCCCAT
GACCGAAACCAAGACTGTGACTAAGGCGGTCGTCGCCAAACCAGTAAAAG
GCCCGAAGACCGTAGTCATCGGGCCCGTCGTAGAGTCCCGAGGAGTGTCG
ACCGCTGGCCGAGAGGTCTCGACCGCTGGCCGAGAGGTGTCGACCAAGCG
CGAAGAAAGCCGAGACGTTACGATCAAACGCGACGAAACCCGAAAGGCAT
TCGTCGGCCCAGCCCAAGTCACGACAAAGGTTGAAACAGTGGTAAGTTGA
AAATATTGCAAGAAAATTGTAACTTTGTCAATCAATTCAGAAGTCAAAAA
GGAGGAAAATTACGGTTCATAGAAATAGGCCTAAAATACCATGTCTCACA
GAAAAAAAAAATTACAAAAGATATTCAGGACCTTCTGTACTTACTACCTT
AAATCAAAACGTCGTTGAAGCAAGATAGCCTTGTATGCCAAAATACGATT
AAAAAAAATTCTTTGTTGTTTCATTTTCATACAGGCATATGCTACTAGGC
GCCCAGGCCATTAAGCACATATGCCACTAGTCACGTCAGAACGAACTAAA
CCTGAACTAAACCTGAACCGCTATTTTCAGAGAGGGGATCCAAGCGTGCA
GCGCCACGTGGAGACTGGGCCCGTGGAGGAGGTACGGGAGGTCATCACGG
ACCCCGACGGCACCAAGCGCACCATCATCCGCCGCCGCGTCGTCAAGACT
ACGAAGACTACCACCAGCACCCCCGTCATCACAAAACGCGTGGAAAC Coding sequence (CDS) from alignment at Sc0000000:2939028..2946774+ >BlTCONS00000399 ID=BlTCONS00000399|Name=BlTCONS00000399|organism=Branchiostoma lanceolatum|type=CDS|length=1557bp|location=Sequence derived from alignment at Sc0000000:2939028..2946774+ (Branchiostoma lanceolatum)
GGCGCACGGTACGACAAGGAGGTGATCCCGGCCAGAATCGACACGGCGAA
GGAGGCCAGGATGAAGTTCCTGCAGGGACAGGTGTCCAATGCCGAGCTGG
ACGACCGGACCCGCCAGGAGGCGCTGGCGGAGCTGGAGTCGGTCCGGTCC
GCCCGGCTACAGATGGAGGAGGTGCGACAGGAAGTCGGCACCAGGTATGA
CAAGGATATTCCACCACCCGAGTGCTGCCAAGTCAAGAAGATTGGAGCGG
CGAAGTTCAAAGAAGGAGACGTTCACAACGCCGAGCTGGACTTCCGATCC
AGACTCGAGGCAGAAAAGGAAATCGAGCGTGTTCTGGTGGAGCGGCAGCA
ATACGAGGACGAGGTACTTCCGGTGGGCACGGTGGTGGAGAGGGAGCGTG
CGGACCTGGTCTGCAAGGACGCCTCGCGACAGGTCAAAGGTCGATTCGTC
AACGGAGTTGTCGAGGACGAGCACGAGCATGACCCAGGCCTGAAGGAACG
GGAGGAAATCACTGAGGAAATCCTGATGATCCGGCAGAGACAGCTTGAGG
AGGAAGAGCGGCTGATCAGAGAGCGGTTCGAGCGCGGCGAGATCATCAGC
GAGGAGGTGATCCAGAGGCTGAGGGAATCCCGCAGGAGGATCCAGGAGGA
GATCGAGGAGTACGTGCTGACGACTCCCACGGAGTACCGAGTGGTGTACG
AGTCTGAGCCGACCGACAGCGATCTGCCCCACGAAGGCGACATGGAGGAC
GTGCCCGTGGTGCTCGGCAAGTCCCGGAACTTGAAGCAGAGGTTCGAGAG
CATTGGAGACGAAGAGGAGCTGGTCATCATGCACGTGCCGAAGGATAGGG
TCTGGACATTTCAGGCACCACCCGAGAAACCATGGACGACACCCACGGAG
CCCAGGGTCTTTAAGAAGGTGACATATACCCCTGCATCTGGACCTGCCAA
GAAACACCAGGTTGCTAAAGTGGAGATGGTACGGAGCGCCAGGGTTCAGT
TAGAGGATCAGAGCGGCCTTTCTGCGCACCAATTCCTCCCTCAACTCCCT
CCCCGGAAACCGCCCCCAAGGATCGAGCCGCCAAAGGTGAAGTTTGAAGA
GCCAACCCTAGTGCCCGCGGCTGTGCCACGTAAGGTGACCGTGGGTCCCA
TGACCGAAACCAAGACTGTGACTAAGGCGGTCGTCGCCAAACCAGTAAAA
GGCCCGAAGACCGTAGTCATCGGGCCCGTCGTAGAGTCCCGAGGAGTGTC
GACCGCTGGCCGAGAGGTCTCGACCGCTGGCCGAGAGGTGTCGACCAAGC
GCGAAGAAAGCCGAGACGTTACGATCAAACGCGACGAAACCCGAAAGGCA
TTCGTCGGCCCAGCCCAAGTCACGACAAAGGTTGAAACAGTGAGAGGGGA
TCCAAGCGTGCAGCGCCACGTGGAGACTGGGCCCGTGGAGGAGGTACGGG
AGGTCATCACGGACCCCGACGGCACCAAGCGCACCATCATCCGCCGCCGC
GTCGTCAAGACTACGAAGACTACCACCAGCACCCCCGTCATCACAAAACG
CGTGGAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000399-exon-Sc0000000-1564993656:2939028..2939221 | BlTCONS00000399-exon-Sc0000000-1564993656:2939028..2939221 | Branchiostoma lanceolatum | exon |
| BlTCONS00000399-exon-Sc0000000-1564993656:2939780..2939903 | BlTCONS00000399-exon-Sc0000000-1564993656:2939780..2939903 | Branchiostoma lanceolatum | exon |
| BlTCONS00000399-exon-Sc0000000-1564993656:2940186..2940383 | BlTCONS00000399-exon-Sc0000000-1564993656:2940186..2940383 | Branchiostoma lanceolatum | exon |
| BlTCONS00000399-exon-Sc0000000-1564993656:2940783..2940923 | BlTCONS00000399-exon-Sc0000000-1564993656:2940783..2940923 | Branchiostoma lanceolatum | exon |
| BlTCONS00000399-exon-Sc0000000-1564993656:2941552..2941749 | BlTCONS00000399-exon-Sc0000000-1564993656:2941552..2941749 | Branchiostoma lanceolatum | exon |
| BlTCONS00000399-exon-Sc0000000-1564993656:2943184..2943288 | BlTCONS00000399-exon-Sc0000000-1564993656:2943184..2943288 | Branchiostoma lanceolatum | exon |
| BlTCONS00000399-exon-Sc0000000-1564993656:2943775..2943900 | BlTCONS00000399-exon-Sc0000000-1564993656:2943775..2943900 | Branchiostoma lanceolatum | exon |
| BlTCONS00000399-exon-Sc0000000-1564993656:2945963..2946268 | BlTCONS00000399-exon-Sc0000000-1564993656:2945963..2946268 | Branchiostoma lanceolatum | exon |
| BlTCONS00000399-exon-Sc0000000-1564993656:2946608..2946774 | BlTCONS00000399-exon-Sc0000000-1564993656:2946608..2946774 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:2939028..2946774 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000203 |
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