BlTCONS00000391 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000391
Unique NameBlTCONS00000391
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:2911360..2912944+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000391 ID=BlTCONS00000391|Name=BlTCONS00000391|organism=Branchiostoma lanceolatum|type=mRNA|length=1585bp|location=Sequence derived from alignment at Sc0000000:2911360..2912944+ (Branchiostoma lanceolatum)
CGCAGAGGTTACCCAAGAGGTGGCTGAACCTACAGCTGTTGAACAAAGTC CAGTTGTTGCCCAAGAGGCGGTTGAAACGCCAACAGTTGTGGCGGAACCT CCCATAGAACCACCTCCTGCAGCCGCAGTCGAAGAGGCCGCACCAGAGGC AGCACCTACAGCTACTGAACAAAGTCCAGTTGTTGCAGAAGCTGTAGATC CTGAGAGTGCACCTCCCCCTCAAGAAGTTACACAAGTTGCTGAAGTTGCA CCTCAGACTGCTGAAGTTGCTCCGACGGAAGCACCGACAGCTCAGGCCAC AGTTGCTGAAGAAAGTCCTGCCCCTGTTGTTGAAGAAGCTGCTGCAGTCA CTGACGTTGCACCGTCGTCTCCAGAAACGGCACTTGAAGCGGTTGAAGCA CCGACAGCTCAGGCCACAATTGCTGAAGAACGTCCTGCCCCTGTCGCTGA AGAGGCTGCTGCAACTGCTGAGGTGACACCGTCTACTCAACAAGCTGCGA GTGGAGAAAGTCTAGCCCCAGCCGTTGAAGAAACACCTCCATCGGTACTG GAAGCGCCCAAGGAACCAGCCGAACCTCTTGCAACCGAAGAGAGTTCTGC AAAAATAAAGATGGAAGTCACGACTAGCGAAGTGGCGCCTGCCGCGCCAG ACGTCACCGAGGAAGCAGTAGTACCGGTGGTGTCCTGGAGTGTTGCCGAT GCTTATGTGGATGCATCCGAGGTGACAGCAGACGTTTCAGTACCGAAAAC CGAAGTAACTCCAGCACCTCCACCGTCTCCTACACCAGCCGAAGCTCCTC AAGCTGAACCCAAAGAGAAACCCAAAGCTGAAGTCGCACCCCCTCCAGCC CCCATAGAAAAGCCCAACGCCAAGGTTGCACCCCCTACATCAGCTGTAGA GAAGCCCAAAGTCACACCCCCTCCAACAGAGAAGCCCAAAGCCAAAGTCA CACCCCCTCCAACAGAGAAACCCAAAGCCAAGGTCGCACCCCCTCCAGCA CATATAGAGAAGCCCAAAGACGCACCCCCTCCTCCAGCAAAGAAGAAGAA GAAAGCCAAAGCTCCTCCGGCGAAACCTGTTCCTGTCGAAGTAAAGGAGG AGACGAAAACGGTGACGTTCGCACCCGGAGAACCCGAGGTCATTTCTGAA ACCTTTATTGAAATGTCTGATCCCATCTTTGAAACGGCCGAAGCAGTGCA GGTGTGTGCTGTGTGCGCTACTACTACGATGTGCTACTCCGTGGTCGTAT GGTAGTAATGCCAAGTGAACATGACAGAAAAAAGAACCAAGTGACATATT CATTGACGTTGAATGAGTACCAGAACTACAAAAAAGAAAACATGTTCAAT TGTCCAGAGCTCTTTCGAATAAACAGGTGTTTTCAAAAATGACATGCCAT TTACAGCAGACAATATGAAAAGAAAATACAATTTAAAAAAAAAAACCTAT CTACGNGGAAGCACCGACAGCTCAGGCCACAGTTGCTGAAGAAAGTCCTG CCCCTGTTGTTGAAGAAGCTGCTGCAGTCACTGACGTTGCACCGTCGTCT CCAGAAACGGCACTTGAAGCGGTTGAAGCACCGAC

Coding sequence (CDS) from alignment at Sc0000000:2911360..2912944+

>BlTCONS00000391 ID=BlTCONS00000391|Name=BlTCONS00000391|organism=Branchiostoma lanceolatum|type=CDS|length=519bp|location=Sequence derived from alignment at Sc0000000:2911360..2912944+ (Branchiostoma lanceolatum)
GCAGAGGTTACCCAAGAGGTGGCTGAACCTACAGCTGTTGAACAAAGTCC
AGTTGTTGCCCAAGAGGCGGTTGAAACGCCAACAGTTGTGGCGGAACCTC
CCATAGAACCACCTCCTGCAGCCGCAGTCGAAGAGGCCGCACCAGAGGCA
GCACCTACAGCTACTGAACAAAGTCCAGTTGTTGCAGAAGCTGTAGATCC
TGAGAGTGCACCTCCCCCTCAAGAAGTTACACAAGTTGCTGAAGTTGCAC
CTCAGACTGCTGAAGTTGCTCCGACGGAAGCACCGACAGCTCAGGCCACA
GTTGCTGAAGAAAGTCCTGCCCCTGTTGTTGAAGAAGCTGCTGCAGTCAC
TGACGTTGCACCGTCGTCTCCAGAAACGGCACTTGAAGCGGTTGAAGCAC
CGACAGCTCAGGCCACAGTTGCTGAAGAAAGTCCTGCCCCTGTTGTTGAA
GAAGCTGCTGCAGTCACTGACGTTGCACCGTCGTCTCCAGAAACGGCACT
TGAAGCGGTTGAAGCACCG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000391-exon-Sc0000000-1564993656:2911360..2911771BlTCONS00000391-exon-Sc0000000-1564993656:2911360..2911771Branchiostoma lanceolatumexon
BlTCONS00000391-exon-Sc0000000-1564993656:2912835..2912944BlTCONS00000391-exon-Sc0000000-1564993656:2912835..2912944Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000391BlTCONS00000391-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:2911360..2912944 +
Properties
Property NameValue
GeneIDBlCUFF000205