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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:2891375..2896187+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000381 ID=BlTCONS00000381|Name=BlTCONS00000381|organism=Branchiostoma lanceolatum|type=mRNA|length=4813bp|location=Sequence derived from alignment at Sc0000000:2891375..2896187+ (Branchiostoma lanceolatum)
CAAAGATGATGACAGCGAAGACGAAGAGAAGACAAGTACCCCACCAGTTA
CTAACAAGAGTATGTTCACCTTTTTCAAATTTGTAATTTCTTCATTTCTC
TTCTACTTCTTCGTGGTGGTGGTCAGAAATGGTGTAACTTGTATGATATC
TCTTGTTAGGGGACACCTAATGTCTTATTCATTACATACTAATATATTCA
ACAGATTGTTATAGATAAGATATTTGTTTTGTAGCTGCACCTGCAAAGGA
AAAAGCTGACAAAAAATCCTCTTCACCAGAACACAGTATGGAGTTATTTT
CTAAGTTTGGTGATAGACGTAGATGTTTTAGTCTACTGTTGATTTCTACA
AAGGGACAAGGTTGCTACATTTCTAAGTAAATGGCTGACTATATTTGTTT
CCCCTCTTGTCCCCATTCTCAGGAGTCTGTCAGCTTCCAAATACTTCCAG
TTATCATATGTGTAGCATAAAGGCTGATTATTCCCGTATTTAGGTGAAGA
TGAAGATGATTTAGGTGAAGATGAGGATGAAAAGAAGACCCTTACAACAT
CGGGTACTAACAAGAGTATGTTGACACTTTTTATTTATTTCCTCACTTCT
CTTTAATTTACAAAATGTACATGGTGGTGGTTAGAAATGGTGCAACTTGA
ATAGCATCTCCTAAGCCTGTTAGAGGATAGTTAACTTATTCATTACCGAC
ATGTTATTATAAAGAAGATCTTTGTTTTGTAGCTGCAACTGCAAAGGAAA
AAGCTGAAGGAAAATCCTCCTCACCAGAAGACAGTATGAACTCATTTTGT
AAAATACCAGGTGATAGACAGAACTGTAGTTAGTGTAGTTACTGTGTAGT
CTGCAGTTGATTTGTGTAAAGGAATAAGGTTGCTACCTTTTTTTTTATAA
ATTGCTGGCTGTTCTGTCCTTTCTCCTCCATTTCTAGGGACCTGTCAAAT
ATCTGGTGATAGACAGTACTGTTAGTAGTAGTCCACTGCTGATTTGTGCA
AAGGAATAAGGTTGCTACATCATTTTGTAAATGTCTGACTCATTTGTGCA
ACATAAAGAATAATTGTTTCCATATTTAGGTGATGATGATGATGAAAGTG
AAGACGAAAAGAAGACGAATCCAGCATCGGTTACTAAGAAGAGTATGTTA
ACCCTATTTTGTGGTTTCTTCAGTTTTCTTCTAAAATGGTGAATGGTGGT
GGTTGTATAACCTCTCCTTCTAAAGAGATAACTTCTTTATTGCAGAACTA
TATCAAACATCATCAATAACATCTTTGTTCTGTAGCTGCAGCTCTAAAGG
AAAAAGCTGATGAAAAATTGTCTTCACCTCCACAGAGAGAAAGCACCAGT
GATGGTAAAACAAATCATGTTTAACTCTTTACAGTGTCTTATCTTCACTA
AAGTTAGACAAAAACTAACTTGTTTCTTTCTCCCTATTGATTCCTTAATT
CTCTGATCTTCAGTGTCTTCTACCGTCAGCTGAAAAGTGTTTTTATTTTC
CAGCTGTCTCCAAGAGTCGTAGAGACAGCAATGTATCCATGAAGAGTATG
TACATCTTCTTACAGCTTTTTGGTGACGTGGGTGAATGAAGAATTGTTGA
TATTCTAATTTATGCATTAAAATAGTCTGAAACGAATCTTGTGGTGGGTT
TAGGAATGTTTCAATGTTTCGTATTTGTGCAATAGTTCTTTGACCTGTGT
CTCATGATTGCCATGCAGAGGACTGTAGACAGGCAATATCAACAGAAGTT
CTTGTTTCTCTGAGTTTTTGAGATGAAACTGAAAGAGAATAAACTGGGAA
CTTAAGGCACAAAAACGTTGGTGACTGTTGGTCGGATCCTAACAATGCTA
TAAGCTATAAATATTATAAATGTTAAAGTCTATAAATTGTATACATCCAA
GATTTTAACATCTAGTCTCTTCAAGCTCTCTCAAGTTTTCTTGTTGAATG
TTTCAGAAATTTTAGGACAAGTTAAGAATAGTATTTTCTTGTTCGCAGCC
AAATTCTTCTTGGAGAAGATACAAGACAGCAAAGTTGATGGTCCACCTTC
AACAAAGAGCACATGTATGTGTTTTAATGACATAACCATGAGAGCTGCGT
ACCTAAAAAAATTTTAGGTACAGGTACAGGTACACGGGTTTAGGTACAGG
TCCGGACCTGAATCTGTACCTGTAGTACTTGACTGTTCAGAAAATGGTAG
ATTTTCAATAAGGACAAAAGCGTGTTTGAACTGGTAAAAACATAATATTT
GATTGTGCTAGGTATTATTTTTATAAAAACACAGATGAAAATTTGACTCC
AGCCATGCAAATGTGTTTTCTGTGCCTTAGAGTGGCTTTAGAGCACTGCC
ACAGTAATTTCATAGTAATTTTATCTTTCAAAGTGGCCATCCCCTGAGTC
AGGTCCAGTACCAATACAGCAGGGTCAGGTATTTTGGACCTGTACCTAAT
TGATTGTACCTGGCACTGTATCGGTACAGTGTACCAGTACACAGCTCTAA
TAACCATTACACAATGTGCTAAAAAAGATCACAAAATTGTGCTGACTTTC
ACATTTCTGAATTATATCTTTCTGAAAAATTATGGAAAAAGCTACAAGTC
TCAGGCTTCTAACTTGCAATATTTTTTTTGCCTTATACACACTATAGCTG
CTTCATCCGAAGTTACCAAGGAGAGCAAAGTCCGTTCGTTGAAGAGTATG
TTAGAAACTTTTGTGCTCCTTAAAGGCAGAGTGCCTTGATACACTGTACT
TTTATGTACTGGGTATAGAATTTTTTTTCTTCAAATTCATATTCATAATC
TATTTATTTGTGGTGAACTAAATTGTAAATGCCCAGCAAAACGTTCTTGT
GCATGGTAGTATACGTAAATGTTCGCATATTTTTACTACCAATTATAAAA
CATTTCCAATAATGTTAAAAATCATTACTTCAATTTAAAGCAAAAAAGAT
TATATATCTTCAATTTAAAGCAACATTCCTTCTTATACAGGCAGATTTGC
TGACAGATACAAAGAAAAAGAAAGTGGAGTCCCTTTCTCAAAGAAGGGTA
ACTATGTGATACTTGTTGCACACTTTTGTGTCAGGTATTAAGGTGTTCAT
TTCAGATTTATACGGACTATTCTACTGCATGGAAGGGGTGCAAGGGAGTG
GTATGATTTCTACTGTAATATTGCGGTTGAAGATTTTAGCGGTTAGGGAA
AGGGGGTAGTTCACAGCATTTAATCTTAACGGTGGGAACAAGCATTACTC
TCAAATATTGCAATGATGACGTTTTTGCAGTTGACTAGTGACCGTTTAAG
TAGCTGAAATTAAGTTAATAAATCAAAAATTACAGTATATTGACGAATGT
ATTTTTTTTTAAAGCATACACTGAAAAATCTAATGCTCATTTCCTACATG
TAGCCGAGTCCACAGAGAAGTCAAAGCACAAAGAGGAGCCCCTTAAGAGT
ACATGTATGTTTTTGTTTCTTAAGCTGTAATAATTTTTGTTCCTTTTACA
TTCAAATACGTGTCTATTAGTACCATAAACACGTACACTGTAGTTTCACT
CATGCCTGTTTGACCCACACCACGTAATTTGTTAAGCCGGGTAATCAGGA
AAATTGCGCTGGCAAATAGGCTTTGCAAAAAAAGCAGTTTCTACTGTACC
AAAAACAAACGTATATTAACTTACTAAGCTGCCTTTTTTTGTAGCAGCAC
CTGTAAAGGAGGACATAGACAGAAAGATCTCTTCTCCACAAAACAGTATG
CAATCTTTTTTTAACGGTATTTGGTGATGGACGAACTTTTAAATTCAATA
TTCAACACTCAACGTCTGAGTATTCAGAGAATTTCTGCACCGTATTTCCT
CATAGTCATAGAAAAATATCAAAATGGTGACGGACATAGATGTGTAAATG
CGCATTTTCTAAATTCATTCCATTCACAGCTGCGCCAGTAGACAAGGCAA
AAGACAGCAAAATTCCTTCTACACAGAAGAGTACATGTATGTGGATTTAT
ATGTGTTGGTGGTGGTTTTAGCTTTCAAAAAATATCATTTGATAGAATAC
AACACAGGGTATTCCATATCACCCGAGGTACATATCGCACGACAGCCGTA
GGCCTGCCTGTATATGCGTTAAAAGTATCACACGGTCCGGAACGCCTGTA
TCAAACGTTTTCACAGCCCAGGTATGACATAAAATCTGTTACAGTAGGAT
TCTTACCTGTATATTTTCTATTGTAGATAAATTTATCAGAGGGGTGAAAG
GAAGTGATTCAATTTGGTTATTTCACATAGCTACATGTTTGGTAGCATAG
ACTGACATTTTGTATAATTTCTCTCTCAGCTGACTCAATGGATAAGCCAA
AACCAAAGGACACCAAAGTTTCCACTTCACTGAAGAGTATGTGTCTATTT
CTTTGGAATGATGCAGTGATTTAAAAAATGTTTTATCGACCATAACTTAT
CATAATGCCATTTGTGTATGTTACATGTACCTATATGTATATAGGTCACT
GCAGACAGAAATGAAACTTTAAGCATTTTTTTTGTTACTTATAGCAACAA
CTGAGAAGGAAAAAACAGACACACAGTCCTTGCCTCGGGAAAACAGTATG
CCATGTTTTTTCCAAGTATTTGGTGATGGGCAAAACTGTTTCATATCAAA
ATCTAAACTCTAAGCATTTAGATTAGCATATATAGAATTTCTGCCTGATG
TTTTTATGTAAATTGTATGAAATGGGTTAAAGGCAGTGGTTTGACTTTTC
AGAGAATTTGACTGACAATTTTTCTCTCAGTTGCTCTCACAGACAAAGCA
AAGGACATCAAGG Coding sequence (CDS) from alignment at Sc0000000:2891375..2896187+ >BlTCONS00000381 ID=BlTCONS00000381|Name=BlTCONS00000381|organism=Branchiostoma lanceolatum|type=CDS|length=768bp|location=Sequence derived from alignment at Sc0000000:2891375..2896187+ (Branchiostoma lanceolatum)
AAAGATGATGACAGCGAAGACGAAGAGAAGACAAGTACCCCACCAGTTAC
TAACAAGACTGCACCTGCAAAGGAAAAAGCTGACAAAAAATCCTCTTCAC
CAGAACACAGTGAAGATGAAGATGATTTAGGTGAAGATGAGGATGAAAAG
AAGACCCTTACAACATCGGGTACTAACAAGACTGCAACTGCAAAGGAAAA
AGCTGAAGGAAAATCCTCCTCACCAGAAGACAGTGATGATGATGATGAAA
GTGAAGACGAAAAGAAGACGAATCCAGCATCGGTTACTAAGAAGACTGCA
GCTCTAAAGGAAAAAGCTGATGAAAAATTGTCTTCACCTCCACAGAGAGA
AAGCACCAGTGATGCTGTCTCCAAGAGTCGTAGAGACAGCAATGTATCCA
TGAAGACCAAATTCTTCTTGGAGAAGATACAAGACAGCAAAGTTGATGGT
CCACCTTCAACAAAGAGCACATCTGCTTCATCCGAAGTTACCAAGGAGAG
CAAAGTCCGTTCGTTGAAGAGCAGATTTGCTGACAGATACAAAGAAAAAG
AAAGTGGAGTCCCTTTCTCAAAGAAGGCCGAGTCCACAGAGAAGTCAAAG
CACAAAGAGGAGCCCCTTAAGAGTACATCTGACTCAATGGATAAGCCAAA
ACCAAAGGACACCAAAGTTTCCACTTCACTGAAGACAACAACTGAGAAGG
AAAAAACAGACACACAGTCCTTGCCTCGGGAAAACATTGCTCTCACAGAC
AAAGCAAAGGACATCAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000381-exon-Sc0000000-1564993656:2891375..2891433 | BlTCONS00000381-exon-Sc0000000-1564993656:2891375..2891433 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2891609..2891659 | BlTCONS00000381-exon-Sc0000000-1564993656:2891609..2891659 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2891868..2891939 | BlTCONS00000381-exon-Sc0000000-1564993656:2891868..2891939 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2892107..2892157 | BlTCONS00000381-exon-Sc0000000-1564993656:2892107..2892157 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2892454..2892516 | BlTCONS00000381-exon-Sc0000000-1564993656:2892454..2892516 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2892660..2892728 | BlTCONS00000381-exon-Sc0000000-1564993656:2892660..2892728 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2892878..2892919 | BlTCONS00000381-exon-Sc0000000-1564993656:2892878..2892919 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2893373..2893438 | BlTCONS00000381-exon-Sc0000000-1564993656:2893373..2893438 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2894022..2894069 | BlTCONS00000381-exon-Sc0000000-1564993656:2894022..2894069 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2894365..2894421 | BlTCONS00000381-exon-Sc0000000-1564993656:2894365..2894421 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2894778..2894828 | BlTCONS00000381-exon-Sc0000000-1564993656:2894778..2894828 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2895704..2895760 | BlTCONS00000381-exon-Sc0000000-1564993656:2895704..2895760 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2895919..2895969 | BlTCONS00000381-exon-Sc0000000-1564993656:2895919..2895969 | Branchiostoma lanceolatum | exon |
| BlTCONS00000381-exon-Sc0000000-1564993656:2896155..2896187 | BlTCONS00000381-exon-Sc0000000-1564993656:2896155..2896187 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:2891375..2896187 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000204 |
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