|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:2847936..2853699+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000365 ID=BlTCONS00000365|Name=BlTCONS00000365|organism=Branchiostoma lanceolatum|type=mRNA|length=5764bp|location=Sequence derived from alignment at Sc0000000:2847936..2853699+ (Branchiostoma lanceolatum)
GGAAGACAGCCATCGCATGGTCAGCAAACTGATGAAGTCGAAATGGGAAA
GTCATTCGGAAAGCTCAAGTGCCTCGGAAAAGTCTGGCAGCGACGAAAGT
GAGCCAGAACAGATGAGCAAGAACAAAAGCAAGAAAGCGTCCCCATCAAA
ATCATCTGACAAAAGTCCTGCAACTCAAAAAGCCAAAGTTGCCCTCAAAA
CATCAGGGAAGCATAAGGGAGCATCTTCCTCACCACATGTTACAGAAAGC
AGCGGCCAGAAATTACCAAGGAAGAAAGGTAGGGATAAGTCTTCCAGAAA
TGGTGAGAAACAGGTTCACAGGAGAAAACAGCAGACTAAGTCTGAGTCCG
AAAGCCAGCAAGAAGACTCAGACGACGAGAAGCATTCTCACAGCAGTAAG
GTGTCAAGGAAGTCTAGAGAAGATACCAAAGAAGGCAGTAAGTCAACGCA
TAGAACAAGGTCCTCCTCAAGGAGCAGCCAGTCGTCTGATGGGGGTAAAA
AACACAGGGAGAAACACTCAGCAAAGGTGGAGCATGCCAAAGGAGGGAAG
GACAAGGAGAGATCTGGTCGTAAAGGTGAAGACAACACAGACAACAGCAG
GGCGAGACGCCACAGCATCTCCAGCGAGTCAGAACACAGGAGGAGAAGCG
AGAAGCAGAACGTAAAAGATAAGGTCGACAGGCCGCAAGGGAAATGGAGC
TTTCTATTCGGGAAAGACAGGGCTCCTCCAAGGAGGTCTGAAAGCAACCT
GGAACGGCAGGACGACACCTCTGAGAAACAGAGCAGAAGCAGCAGGCGCA
GTCAGAGTGAGGAGAAAGAAAAACACCAGTCCTACCGGAAATACTCCTCT
TCTGAGTATTCCAGCAACGAAGGCAGTGGCTCTGACCATGGGGGTAGCAG
GCGGAGAAATAAGGAGGATGGGCACCACAGCAGGAGGGACTATTCCTACA
ACAGCTACTCTACTGAAAGGGACGAAAGCCACAGAAGGCAGCCAAGGGAG
TACACAGACAGCTATTCTTACAGCTCTGAAGAGCGACACAGGAGGTCTCG
TGACAGGCACAGCGATAGGAGGAGTAGGAGGAGGCACACTCGACATTCAT
CTTCAGACTACTCGACATCAGGGGAACACAGCGACTACGACAAACATCAT
GCAAGTAGGCGAGGACATAAACGTCGCTACTCGGACAGCGAAGACAGGTA
CAGCTCAGACAGGAGCTACTCAAGACACTCGAGGAAGTCTTCCCGCTACT
CTCCAAGGAGATCCAGAAGCATCGACAACAGACGCCAAAGTCGGGAGAAT
TCTGAAAAACGAGACGACTCCAGGAGCAGGGAAAGGGATTATGACTCTCA
CCACCAGGCAAACAGAAGTACCACGGTGTCCTCACAACAAATAATCGAAG
ATGTAGCCGAGACCGTCTCAGCGCCTATAGCTCTGGTCAAGAGTGAACCC
AACAGCAAAGAAGTTACGTCCCCAGTGGACAGACCTCACAGCGAAGCCAT
GGCAGCCATCGCCAAGCAGCTCCTCCAGAAGGCCAGGAACAAGAAAAGTG
CCTCCGACGAATCAGCAGATGCCGCAGTTCGAGCAGGAATCAAGCTGAAG
AACCCTCCTGCCGGCTACTTCGGTCCAAAACTACCCCCATCTCTGGAAAA
GAAGGCTGTTCTCCCCATCATCGGGAAGATTCCTATTGTCAGGAAAATGA
TGACAACGAAGAAAGAAGCTGTGTCACCAGTATCGGGGAAGAAGGATGAC
GTTGCAGAAGCCATCTTTAAGTTAGAAGAACCTCCAACTGAAGAGATGGC
TGGGAACAGCTTCCCTCTCACTGATGCTGCTCCCACGGATGCTTCTCGAG
CTGATGGAGGTGTTCTTGGCAAGATCTCCTTCACCATGAACCAAACGCCG
AGGATTGTCCGACCAGATGTTCGAAAGGAAGCGAGCCAAGAGGTCGCAAA
GGAGAGCAAAGAACAGGATAAGAGAGACGACGGTGCCGGCCAGGCTAAAG
TTCCTCCGGCTATCTCACCTGAGGAGATGGACAAATACAGGTAAATATAG
AATACAACACAGGGTATTCCGTATCACCCGAGGTTCCAGCCCGACTGCAG
GTTGGATTGCCCGACGGTCATAGGCCGGAGGGCGATCCGACCCACAGGAG
GGCTGGGACCGAGGGTGATACGGAATACCCCGTGTTGTATTCTATTTATG
TCATACCCACCCAAGAAAACACACATTTTAATGCGAAATGAAGTTGAGAA
AAGTTGGTGTTCTCGAACATTTCAATGCCTGAATCCAGTATTTAAATTTT
CGATAGCAGCGCACTCAAAATGCATTCCAAATATTCTATGAAAGCCCGGG
TGGTAACCCAAAGTTATCACCCGATCCAGAACACCCATATCGAATGTTTT
TGCGCTACTAGTATATGACATAAAAGAAGTTATATTATGTTCTGCCCTCT
ATTGTGAAGCTTTGGCCACACCAATTTAATTTTTTGTTTCTCGGATTTAA
GAAATATGCTGAGCTGGAAAACAATAATGAAACAAAAGCCCGCAGACCAG
GTTTATGCCTTGTTGCACTCAGTTTCATGGAGCGAATACACTCATGATTA
AGTTTTCCCCCCTGCACTCTGCTTTTGTTAATTTATGATGTCCGCTAGCT
AGTTTTTCACTTTAGAATATCCGAGAAGCAAGAAAATAAATGTGTGGCCT
TCTAATAATTTTACTGCCGCCTTTGTCTTTTGACTTGGACTCCTTTATCT
TTGTTGTACACATTGCTGATGCCCGTAGCTATCATCATATACCTGAGAAG
TTGTCTTGTACTGGTGGATCTCGTAGATACCCAAAGGCCTTCATTGGTGT
AGCTGTGCTTATCTTGAGATAATACAAGTAAGGAGAGTCTTTGAGTAAAC
GCTTTTTGATAAGTGAGGGTCTGCATGCTCTTTTCTGTTAGACGTAGGTA
GCCTATTTCGATTTCCCGTAAGTTGTAGGGAAAGTAATCTTATTCATGGA
ATTCATAGCAAGGCGGACAAATTTTGTGTGATTGCCTTCCTTGATTTGGG
GGTGATGTTTAGGGGGTTCTTCTGAGTTTAGCATAAAGCGTTTTTGGGAC
CCCCCTCACAGACCCTTTTAAATCCTTTGACTTACATGTATTCCCGTAGG
AGGTTGCAGGAGCAGGCCCAACTGCACATCCAGAAGCAGCTGGAACTGCA
GCAGAAACAGAAGGAGCAGCAACACGAGCGACAGCAGCTGCACAACGTGA
ACCCCCCACCACAGCCTCAGCAGNCTGATGGAGGTGTTCTTGGCAAGATC
TCCTTCACCATGAACCAAACGCCGAGGATTGTCCGACCAGATGTTCGAAA
GGAAGCGAGCCAAGAGGTCGCAAAGGAGAGCAAAGAACAGGATAAGAGAG
ACGACGGTGCCGGCCAGGCTAAAGTTCCTCCGGCTATCTCACCTGAGGAG
ATGGACAAATACAGGTAAATATAGAATACAACACAGGGTATTCCGTATCA
CCCGAGGTTCCAGCCCGACTGCAGGTTGGATTGCCCGACGGTCATAGGCC
GGAGGGCGATCCGACCCACAGGAGGGCTGGGACCGAGGGTGATACGGAAT
ACCCCGTGTTGTATTCTATTTATGTCATACCCACCCAAGAAAACACACAT
TTTAATGCGAAATGAAGTTGAGAAAAGTTGGTGTTCTCGAACATTTCAAT
GCCTGAATCCAGTATTTAAATTTTCGATAGCAGCGCACTCAAAATGCATT
CCAAATATTCTATGAAAGCCCGGGTGGTAACCCAAAGTTATCACCCGATC
CAGAACACCCATATCGAATGTTTTTGCGCTACTAGTATATGACATAAAAG
AAGTTATATTATGTTCTGCCCTCTATTGTGAAGCTTTGGCCACACCAATT
TAATTTTTTGTTTCTCGGATTTAAGAAATATGCTGAGCTGGAAAACAATA
ATGAAACAAAAGCCCGCAGACCAGGTTTATGCCTTGTTGCACTCAGTTTC
ATGGAGCGAATACACTCATGATTAAGTTTTCCCCCCTGCACTCTGCTTTT
GTTAATTTATGATGTCCGCTAGCTAGTTTTTCACTTTAGAATATCCGAGA
AGCAAGAAAATAAATGTGTGGCCTTCTAATAATTTTACTGCCGCCTTTGT
CTTTTGACTTGGACTCCTTTATCTTTGTTGTACACATTGCTGATGCCCGT
AGCTATCATCATATACCTGAGAAGTTGTCTTGTACTGGTGGATCTCGTAG
ATACCCAAAGGCCTTCATTGGTGTAGCTGTGCTTATCTTGAGATAATACA
AGTAAGGAGAGTCTTTGAGTAAACGCTTTTTGATAAGTGAGGGTCTGCAT
GCTCTTTTCTGTTAGACGTAGGTAGCCTATTTCGATTTCCCGTAAGTTGT
AGGGAAAGTAATCTTATTCATGGAATTCATAGCAAGGCGGACAAATTTTG
TGTGATTGCCTTCCTTGATTTGGGGGTGATGTTTAGGGGGTTCTTCTGAG
TTTAGCATAAAGCGTTTTTGGGACCCCCCTCACAGACCCTTTTAAATCCT
TTGACTTACATGTATTCCCGTAGGAGGTTGCAGGAGCAGGCCCAACTGCA
CATCCAGAAGCAGCTGGAACTGCAGCAGAAACAGAAGGAGCAGCAACACG
AGCGACAGCAGCTGCACAACGTGAACCCCCCACCACAGCCTCAGCAGCAG
CCTCAAGTCATCTCACAACCCCCTTCAGCCCCTCCACTCCCCCCACCTCC
ACTCACTGCACCTCCTTTTTCATTTTCCGGGTACCAAGCCCCACCCCCTC
CCATGTACGTGTCTGCCTTACCCCCTGTCCCTGTCCCTCCTCCTGGGTTC
CTACCCCCTCCTGTGCTCCCCCCTCCCCCAGGAATGCCGTTCGGAGGCAC
CCTACCCCCTCCCATGAGGCATGCCCCCATCCCATTGCGTCAACCAAGAC
TCGCTCTTACTAAAGACGAACCTCCCCCTCCCGGAACATAAGCAACTCTT
CTATTTTTTACATTTTCACACAAGTCTCATAATCATTCATGCTGCTCAAG
GAATTTCGATAATTAGTCTATGGTATGAGTATTTAGAACGTTTGAGCTTA
GAAATGAAAACATCTGTAGTTGAACCAACCAAACAAAATATTGTTCATAT
TCTGATTAAGTATTATTACGGCTATGAGTTCAGTGTTTGATTGTATATCA
TTCACTTGCTCCATTGCAAGCAATTTAGCCATTATAGATGCTGTCTATAA
AAAAGCAACAGTATCTCGTTTGATATTTACTTTGATATTACCTCTTTATT
TTAAAAGTTATACATGTTGTGCACATGGATTTGAGTAGATGAGAAAAGTT
GCTGATAGAATAGGCATTTGGGTTCATAAAGTTTGCAGTTAAGTTTCAAG
AATGTATAACTTTAGTTAGAAAGCTACAATAAGCTAGATGCACTCATAGT
ATTATGCATGGTATTGTATTTAGAGTATGGTTTATTTACTCGAGTTAAAG
TTTGTTAAGTCTTTAAGGTGTTCTGCTACAGTGGTTCTTAGACTGCTGTC
AGCTGTGTATCAGGTCTTAAGATGCTTAGATATGATAGTTTCTTTATTTT
TTCTTTAAGTTGTATTAATGTATTTCCTTCAGTAGGCCACATCAATTTAA
TTTTTTGGTTCTTGGATTTTCAAAAATTATGCTTAACTGGGTAAATAAAT
TAAAAAGATACAAAAATTGAAGTTCTGCTGCAGTACCAAGGTCACATACC
AGGGGGCCCAGAAT Coding sequence (CDS) from alignment at Sc0000000:2847936..2853699+ >BlTCONS00000365 ID=BlTCONS00000365|Name=BlTCONS00000365|organism=Branchiostoma lanceolatum|type=CDS|length=2772bp|location=Sequence derived from alignment at Sc0000000:2847936..2853699+ (Branchiostoma lanceolatum)
GAAGACAGCCATCGCATGGTCAGCAAACTGATGAAGTCGAAATGGGAAAG
TCATTCGGAAAGCTCAAGTGCCTCGGAAAAGTCTGGCAGCGACGAAAGTG
AGCCAGAACAGATGAGCAAGAACAAAAGCAAGAAAGCGTCCCCATCAAAA
TCATCTGACAAAAGTCCTGCAACTCAAAAAGCCAAAGTTGCCCTCAAAAC
ATCAGGGAAGCATAAGGGAGCATCTTCCTCACCACATGTTACAGAAAGCA
GCGGCCAGAAATTACCAAGGAAGAAAGGTAGGGATAAGTCTTCCAGAAAT
GGTGAGAAACAGGTTCACAGGAGAAAACAGCAGACTAAGTCTGAGTCCGA
AAGCCAGCAAGAAGACTCAGACGACGAGAAGCATTCTCACAGCAGTAAGG
TGTCAAGGAAGTCTAGAGAAGATACCAAAGAAGGCAGTAAGTCAACGCAT
AGAACAAGGTCCTCCTCAAGGAGCAGCCAGTCGTCTGATGGGGGTAAAAA
ACACAGGGAGAAACACTCAGCAAAGGTGGAGCATGCCAAAGGAGGGAAGG
ACAAGGAGAGATCTGGTCGTAAAGGTGAAGACAACACAGACAACAGCAGG
GCGAGACGCCACAGCATCTCCAGCGAGTCAGAACACAGGAGGAGAAGCGA
GAAGCAGAACGTAAAAGATAAGGTCGACAGGCCGCAAGGGAAATGGAGCT
TTCTATTCGGGAAAGACAGGGCTCCTCCAAGGAGGTCTGAAAGCAACCTG
GAACGGCAGGACGACACCTCTGAGAAACAGAGCAGAAGCAGCAGGCGCAG
TCAGAGTGAGGAGAAAGAAAAACACCAGTCCTACCGGAAATACTCCTCTT
CTGAGTATTCCAGCAACGAAGGCAGTGGCTCTGACCATGGGGGTAGCAGG
CGGAGAAATAAGGAGGATGGGCACCACAGCAGGAGGGACTATTCCTACAA
CAGCTACTCTACTGAAAGGGACGAAAGCCACAGAAGGCAGCCAAGGGAGT
ACACAGACAGCTATTCTTACAGCTCTGAAGAGCGACACAGGAGGTCTCGT
GACAGGCACAGCGATAGGAGGAGTAGGAGGAGGCACACTCGACATTCATC
TTCAGACTACTCGACATCAGGGGAACACAGCGACTACGACAAACATCATG
CAAGTAGGCGAGGACATAAACGTCGCTACTCGGACAGCGAAGACAGGTAC
AGCTCAGACAGGAGCTACTCAAGACACTCGAGGAAGTCTTCCCGCTACTC
TCCAAGGAGATCCAGAAGCATCGACAACAGACGCCAAAGTCGGGAGAATT
CTGAAAAACGAGACGACTCCAGGAGCAGGGAAAGGGATTATGACTCTCAC
CACCAGGCAAACAGAAGTACCACGGTGTCCTCACAACAAATAATCGAAGA
TGTAGCCGAGACCGTCTCAGCGCCTATAGCTCTGGTCAAGAGTGAACCCA
ACAGCAAAGAAGTTACGTCCCCAGTGGACAGACCTCACAGCGAAGCCATG
GCAGCCATCGCCAAGCAGCTCCTCCAGAAGGCCAGGAACAAGAAAAGTGC
CTCCGACGAATCAGCAGATGCCGCAGTTCGAGCAGGAATCAAGCTGAAGA
ACCCTCCTGCCGGCTACTTCGGTCCAAAACTACCCCCATCTCTGGAAAAG
AAGGCTGTTCTCCCCATCATCGGGAAGATTCCTATTGTCAGGAAAATGAT
GACAACGAAGAAAGAAGCTGTGTCACCAGTATCGGGGAAGAAGGATGACG
TTGCAGAAGCCATCTTTAAGTTAGAAGAACCTCCAACTGAAGAGATGGCT
GGGAACAGCTTCCCTCTCACTGATGCTGCTCCCACGGATGCTTCTCGAGC
TGATGGAGGTGTTCTTGGCAAGATCTCCTTCACCATGAACCAAACGCCGA
GGATTGTCCGACCAGATGTTCGAAAGGAAGCGAGCCAAGAGGTCGCAAAG
GAGAGCAAAGAACAGGATAAGAGAGACGACGGTGCCGGCCAGGCTAAAGT
TCCTCCGGCTATCTCACCTGAGGAGATGGACAAATACAGGAGGTTGCAGG
AGCAGGCCCAACTGCACATCCAGAAGCAGCTGGAACTGCAGCAGAAACAG
AAGGAGCAGCAACACGAGCGACAGCAGCTGCACAACGTGAACCCCCCACC
ACAGCCTCAGCAGNCTGATGGAGGTGTTCTTGGCAAGATCTCCTTCACCA
TGAACCAAACGCCGAGGATTGTCCGACCAGATGTTCGAAAGGAAGCGAGC
CAAGAGGTCGCAAAGGAGAGCAAAGAACAGGATAAGAGAGACGACGGTGC
CGGCCAGGCTAAAGTTCCTCCGGCTATCTCACCTGAGGAGATGGACAAAT
ACAGGAGGTTGCAGGAGCAGGCCCAACTGCACATCCAGAAGCAGCTGGAA
CTGCAGCAGAAACAGAAGGAGCAGCAACACGAGCGACAGCAGCTGCACAA
CGTGAACCCCCCACCACAGCCTCAGCAGCAGCCTCAAGTCATCTCACAAC
CCCCTTCAGCCCCTCCACTCCCCCCACCTCCACTCACTGCACCTCCTTTT
TCATTTTCCGGGTACCAAGCCCCACCCCCTCCCATGTACGTGTCTGCCTT
ACCCCCTGTCCCTGTCCCTCCTCCTGGGTTCCTACCCCCTCCTGTGCTCC
CCCCTCCCCCAGGAATGCCGTTCGGAGGCACCCTACCCCCTCCCATGAGG
CATGCCCCCATCCCATTGCGTCAACCAAGACTCGCTCTTACTAAAGACGA
ACCTCCCCCTCCCGGAACATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000365-exon-Sc0000000-1564993656:2847936..2849975 | BlTCONS00000365-exon-Sc0000000-1564993656:2847936..2849975 | Branchiostoma lanceolatum | exon |
| BlTCONS00000365-exon-Sc0000000-1564993656:2851085..2851399 | BlTCONS00000365-exon-Sc0000000-1564993656:2851085..2851399 | Branchiostoma lanceolatum | exon |
| BlTCONS00000365-exon-Sc0000000-1564993656:2852509..2853699 | BlTCONS00000365-exon-Sc0000000-1564993656:2852509..2853699 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:2847936..2853699 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000198 |
|
