BlTCONS00000356 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000356
Unique NameBlTCONS00000356
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:2626075..2629941+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000356 ID=BlTCONS00000356|Name=BlTCONS00000356|organism=Branchiostoma lanceolatum|type=mRNA|length=3867bp|location=Sequence derived from alignment at Sc0000000:2626075..2629941+ (Branchiostoma lanceolatum)
CGGGGGGCGTGTCAGTGTTTATTTGAAAAATGGCTGTCCTATTAAAGAAC CAGTTTCACGACTAGGCCCAGTGAAAGAATCGGTGTGTGTGGTATTAGGA CAGATCGGTAGTCGTTTACTGTGAAACAATGGAATTTCAAATTCATATTG TTGAAATTCCATTTGAAGGGAACATCCCACAATTTACTTGTTCATCTATT TTTTAACAATCAATACATACACTTTAAGAGTTATCCTGCTTCAAGTGCTT TGCAGTTTAATCAACCCTCAAACTAATTAAAAACTGCATTTCCAGAGAAA GCCGCTACAGGAGCCAAGATCTAGATGCGTCTCCACAACCCAAAAAGATG TAAACATTTAATATCAAATCTTAAAAATCCATTCATTTATATTTCACAGG TAACGACTCTCAATCTGTCCTTAGCTAATACCGATACAAGTCTGTGTTGT CTCATTCGTCTGCAAGATGGAAGCAGTTCAGAAGCAGAGACTGTCGGCAG TGTTGAGGCAGCTGGTACCGCTGAGGGAAGGGGAGGACAACCAGCTGCAC AAGGCAGCAGAGACAGGAGATCTGGATGGCTTGAGACAGCTGGTAGAAAG TGATATGAACGGGTAAGGGCATGAAACTTCATCTGTGTTCATACTTTACG TGATTGCTTTTCAGCACTTAGAACAGAGGACAGGAAAGGTTGTTAAGCAG TAAGGTACAAAGAAAGGGACAGGGGAAGGTCCTTCAGCACTAAGGACAGG GGGAATGTTCTTCAGTACTAAGGACAGGAGACAAGAAGGTACATAAGCAC TTAAGGTACCCATGGAAGGTACTTCAGCACTAAGGACAGGGGACAGAGAA GGTCCTTCAGTACTCAGGACAGGGAAGGCCCATCAGCACTAAGGGCAGGG AAGGTACTTTAGCACTAAGGACAGGACAGGGAAGGTTCTTCAGCACTAAG GACAGGGGAACAGGGAAGGTCCTTTTGTCACTTACTATAGGAGACAGGGA AGGTTCTTCAGCACTAAAGACAGGGGGTGGTAGATGGGTAGGGCTTTGCC AAAAGTATAAGTAGCTGAAACTTGGATATAGATAAGTTTCAGACTGTGGC ATTAAATGATTCATTCTGGTTGGACAAGACGAATTCAGTCAAGTCAAGTC AGCACTTTCAATTTGCAGAGGTATGTTGTTGCTGAATTTTATACATGTAT AACCTGTGGTACATAATACTGTGTTCCTAGGCAGATTGACAGTAAGAATC ATCTCGGCTGCACACCACTGAGGTTAGCAGCAGCTAAAGGCCATGTGGAC TGTGTGCAGTATCTGGTCTCACACGGTGCAGGGCTGGAGGTGGCAGACAT CAAGGTATGGTCTCAGCAAAGCAAAAGAAGAATTAATGGAGGAAAAATGA TGTTTCGTTTTTATGCCATGTCTGCTTTCAGTGCTTCTTTTGCCTTAATG CACTGTTATTGCGGTATCTCTAAAAATGACAGGATTTATACAGAACTTAC TGTAAATGCCTCAACGTTTGTGGGTAATTAATTTTGTCGCGTTGATAAAG GTTAGACATCCAGGTAATAAGATACGCCAAGAATAATTACTCAAGCAACT GGATAAGATTTTGAAACAGTCAGACGTTTCAGACAGTATCCACTGTCTTT CGTCAGTGACTTACGATAGGACAATTAATTTTGTCCTTGGAAGAAAATAG AGCATTCACAGTGGTGTTAAGTTTGGAGTTGAACCAATGGGGTAGGTGCA CTGAAGACATAACAAGCATTTTTGCAGTAGTTTCAAGTTTGCGATGGAGA GGTCATCACCAAAACTGCGAACATTGAACCACCATGAAAATTGCTACATC TTCAGTATGCTATGTCTGCTTTCAGTGCTTCTTTTTAATTGATGTACTGT TCTGTATCTGTATAGCTGGTGTAACACACCAGCTGTTATATACAATACAT GTATTTGCAGAAAAGATTTACAGAAAACTTACTGTTTTTTCTCAGTCACA GACTCCCCTGTATGCGGCAGTGCGGAGGAAACACCCAGACTGTGCCGAGG TTCTGTTAAAGGCCAGCGCCGTCCCTAACGGCGACCCGAACAACCTCGCC ACGCCTCTCTTCAGAGCAGCTCAAGATGGCTGCCTCCTGTGTATGAAAGT CCTGATCCGCTACGGAGCAGAACTCAACTTCTCCAAACCGACCATGGAGG AGGGTGCTCTCTGCAGTACTGTGCTGTACATCTGCTTGATTTATAAACAT TACGAATGCTGTAAGTTACTGCTCTGCTCTGGCGCTGATCCTGACTTTCA CATCAGAAAGAAGCTGAATCTAACAAACTTGGCAAAGGACGAGTCGCTTC TACAAGCTGTAGTAAAACATGACCTACCTGTTGAGTTTGCCCAACTACTC ATAGAGTTTGGAATCAATAGATTTCAAAGAAACTCCATTGGAAGGACAGC GGACCAGGACTCGGGGAATGAAAGTGCCAAATTTATCCAACTGAGTCTAG GTAATCCTTCATGACTTTTTCAGGGAGCTTACTCAACTGACCAGCACTAG TGATATACTGTAAATGGCTTTAACTTTTCGGGGATTAAATTTCACAGTAG GGAAAAAATGGAGTGTATTTGGTGATTATTAGTTTGCGGTTAAAACAAGG GTTTGGCAAATTATCATTTGCACTGTGGTTTTAAGTTTGCGGCAAAGAAG TTACAATGCAACAGATAAGATCTAAAGCAATTGTATCTGATAATAGACAT TTATGTTCATCTATTAGACTTCCTATATAAGGTTGCTTATAATTTGTTCT GTATTGTTTGTGTTTTCATACAGCATGTCCACTTCTCCTGCAGTCACAGT GCCGAATTGGAATCAGACGATTTCTTGGACTACACAGACTCCAACAGATT CCAGCACTTCCTCTACCAACCAAGCTCATCAACTATCTACTTTTTGCTGT GTGATAGAGTTTTATTTTGCAAGTTCTTGCCTGAGGACTAGTTGCAACAA AATAATACAGACAATGCAAATTAACAATAGCAACAAGTGGAACAAGTGAC TATTCTAAGAACTGTTATGGAATACAATCTAAGCTTTTCTTAATAGATAT TGCATCATCTGAAACACAAGAGGCAAGTAATAGCAGTGTAACAGTGGGGT TCAAGTGCCACCAACTGACCACTCTAACGGGTTCGGACCTTTCAGCCTAG CGGTTACTGTGGCGGATTGTGTGCTGGCGGGCCTGGGTTCGATCCACAGG AGCCAGGAGACTGTGCTTCTAGCCTCTTGTGTTTCACGTCAGTAAATATC GCATCATCAGTAATACTAAATATTAGCAATAAATGCTGTGAGTTTCCTTT ACAAGAGACTTATGAATATTATCAATTTGACAATGACTTATGCAGTAGAT CATGACTCTGAATAAAGAAAAACTTTTGAAACATCTTGTCAAACAGTAGA GTGTGGAATCAACTTGGCAAAAGTGACACCTTGCAGTATTGCTATGAACT GCATGTGCCAATAGGTTGTCCAGTCCTTGAGAAAGATATGACCTTGCACA GCTATGATAATTGGGTCCTGCCAAAACGGAGTAAATGACTTTCCTATCTC AGCTCATCAACTGGTTTGTAGTTTGCCCTTTGAAGAAGAAGGTTATGCAT GCCATGAAGTCTCGGGCCACTGTGTATGCAATCAATTGTAAATATCATAA TACAAGAAGTTGTGGATTGTGGATGGATCTTTATTATATTTCATATGTTG TTGTGTGTTGGCAAAATGAAGAAATTATTAAATCATGGGCCCCCTAGTGG GTTTCTAAGGTACTGCAGCATTCCTCCCTGTTTTGATATCTCATGTTCTG GATAAGTGCCATGGTCA

Coding sequence (CDS) from alignment at Sc0000000:2626075..2629941+

>BlTCONS00000356 ID=BlTCONS00000356|Name=BlTCONS00000356|organism=Branchiostoma lanceolatum|type=CDS|length=906bp|location=Sequence derived from alignment at Sc0000000:2626075..2629941+ (Branchiostoma lanceolatum)
ATGGAAGCAGTTCAGAAGCAGAGACTGTCGGCAGTGTTGAGGCAGCTGGT
ACCGCTGAGGGAAGGGGAGGACAACCAGCTGCACAAGGCAGCAGAGACAG
GAGATCTGGATGGCTTGAGACAGCTGGTAGAAAGTGATATGAACGGGCAG
ATTGACAGTAAGAATCATCTCGGCTGCACACCACTGAGGTTAGCAGCAGC
TAAAGGCCATGTGGACTGTGTGCAGTATCTGGTCTCACACGGTGCAGGGC
TGGAGGTGGCAGACATCAAGTCACAGACTCCCCTGTATGCGGCAGTGCGG
AGGAAACACCCAGACTGTGCCGAGGTTCTGTTAAAGGCCAGCGCCGTCCC
TAACGGCGACCCGAACAACCTCGCCACGCCTCTCTTCAGAGCAGCTCAAG
ATGGCTGCCTCCTGTGTATGAAAGTCCTGATCCGCTACGGAGCAGAACTC
AACTTCTCCAAACCGACCATGGAGGAGGGTGCTCTCTGCAGTACTGTGCT
GTACATCTGCTTGATTTATAAACATTACGAATGCTGTAAGTTACTGCTCT
GCTCTGGCGCTGATCCTGACTTTCACATCAGAAAGAAGCTGAATCTAACA
AACTTGGCAAAGGACGAGTCGCTTCTACAAGCTGTAGTAAAACATGACCT
ACCTGTTGAGTTTGCCCAACTACTCATAGAGTTTGGAATCAATAGATTTC
AAAGAAACTCCATTGGAAGGACAGCGGACCAGGACTCGGGGAATGAAAGT
GCCAAATTTATCCAACTGAGTCTAGCATGTCCACTTCTCCTGCAGTCACA
GTGCCGAATTGGAATCAGACGATTTCTTGGACTACACAGACTCCAACAGA
TTCCAGCACTTCCTCTACCAACCAAGCTCATCAACTATCTACTTTTTGCT
GTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000356BlTCONS00000356-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000356-exon-Sc0000000-1564993656:2626075..2626686BlTCONS00000356-exon-Sc0000000-1564993656:2626075..2626686Branchiostoma lanceolatumexon
BlTCONS00000356-exon-Sc0000000-1564993656:2627305..2627428BlTCONS00000356-exon-Sc0000000-1564993656:2627305..2627428Branchiostoma lanceolatumexon
BlTCONS00000356-exon-Sc0000000-1564993656:2628070..2628574BlTCONS00000356-exon-Sc0000000-1564993656:2628070..2628574Branchiostoma lanceolatumexon
BlTCONS00000356-exon-Sc0000000-1564993656:2628898..2629941BlTCONS00000356-exon-Sc0000000-1564993656:2628898..2629941Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:2626075..2629941 +
Properties
Property NameValue
GeneIDBlCUFF000197