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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:2599925..2607950+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000348 ID=BlTCONS00000348|Name=BlTCONS00000348|organism=Branchiostoma lanceolatum|type=mRNA|length=8026bp|location=Sequence derived from alignment at Sc0000000:2599925..2607950+ (Branchiostoma lanceolatum) GAGAAAGAGGAGGAGGCTATAGAAGAAGGGGAGACGGAAAAAGAGGAGGA
GACTGCAGAAGAGGTGGAGATGGAGAAAGAGGAGGAGGCTATAGAAGGGG
AAATGGAGAAAGTGGAGGAGGCTATAGAAGGGGAAATGGAGAAAGAGGAG
GGGACTGCAGAAGAAGTGGAGATGGAGAAAGAGGAGGAATCTATAGAAGA
AGGGGAGATGGAGACAGAGGAGGAGACAACAGAAGAAGCGGAGATGGAGA
AAGAGGATGCGGAGACGACAGAAGCAGACCCAGAGAAAGAGGAGGGGCAG
TCTACAGATATGGTAGACCTTGAGGAAGACACGGTAGAAGTGGCTGATAC
GGAGACAGAGGAGACGACAGAGCTTGCTCCTGTTGGTGACGTTGCAGAAG
CTGAGGTAACAGAGCAGCCAGAGGCAGAGGGCCTCCCAGAGATCGAAGAG
GGCACTGTGCCAGAGCTAGAGGAAGAAGAGACAACAGAAAGCGAGGAGAC
GACGACAGTTCCTACTCCTGTTGAGGTCGTTGCAGAAGCTGAAGTAACAG
AGCAGCCAGAGACAGAGGGCCTCCCAGAGATAGAAGAGGGCATTGTGCCA
GAGGAAGAAGAGACAACAGAAAGCGAGGAGACGACGACAGTTCCTGGTCC
TGTTGAGGTCGTTGCAGAAGCCGAAGTAACAGAGCAGCCGGACGCAGAGG
GCCTCCCAGAGATCGAAGAGGACATTGTGCCAGAGCAAGAAGAGACAACA
GAAAGCGAGGAGACGACGACAGTTCCTGGTCCTGTTGAGGTCATTGCAGA
AGCTGAAGTAACAGAGCAGCCGGACGCAGAGGGCCTCCCAGAGATCGAAG
AGGACATTGTGCCAGAGGAAGAAGAAGAAGAGACTACAGAAAGCGTGCCA
GTAGTCGAGGTTCCGCTGGACGGGACAGAGAGTGAGACAGAGGAAGAGGC
AACGGCGCTACCCGACGAACCCGGGGAAACGGCTGCGGAAGTGAAGGTTT
GGTTAATGCTTTGGCTCTTTGAAGTTCGGTTGTTCGTTTGATCTGTTTGA
GCCTTTGTTTATTCATAAGAATCTAAAATCAGCCTGTATGTCACTTTTCC
TTGAGCTCATGAGAAAGGAGGTAAGGATCAGACTAAGTTCTACAATCAGG
CTAAGTGATGAATGATGTGGAACAGATTTATGATATGCATATAAAACATC
GCTGTAGCTACGGAGCAAAAAACTGAAACCACCGCCCTACAGGTAGAATT
ACTACGTCTACATATGCATGCTAGTACAACGACATGGAAGGGTGTACAGG
AATATCGTTGCCATGGGCAATGTAGACCCAATACTTTGTTTCTTATAAAA
TTTAGTACCTCTAACACAGCTGGAATATAACATTTTTGAACGGATTTGTT
GCTGAAGCTTTTTGCAAGATTCGTGAAGACATTTAATCAAACAGTGAACA
TACAATTCATGTAACATCTACTACCATAATTCCACATGGGTTTCCGCCAC
CCTGAAAAGAGATCTCCATTGAACCCAACATCCCCCAGCACAATGCACTA
CTGACAGTACTGTATATCTATACTGGGCACACCTGTAGGGGGGTCATGTG
GGGTTTTGCAACACCAGAGATCTATAAAACCCACTGTTTTTCAAAGTGGC
GGATTTACGTAACCCGGCGGATTAATGTTAATGGCGGTTATCATGTATGT
TTGCAGCCCGAGGAAGCAATGCCAGAGGCTGAAGCTGAGGAGGGCGAGGC
TGACGATCGGACCCACCAGGAAGCCAGCGAGGAGGAGACCAACGTGATCG
GACTGGCGGAGTTACGTCGACTCGGCTCAGACGCAGATCCCAATGGCGAT
ACAGGTCATATATCAGCATATGTTATGCTATTACTTTATTAGTGCTTAGA
GGTATTTCTAAAATACGTTAGTAGATTACGAGTCACTGACTCTGTCGTGC
TCAACTGGTTTCCCAGTTACATCTAATGTACAAAAATATAGTATTGACTT
GTTCTGCCAGGTCATTCTAGTGATGCTGAAGAAGAGTGATGGATGTCACT
CGGAACGTCCGGAAGTAAATCTCCGTATCTTATCCGGTTGTAGGAATGTA
CATGATAGTAATACATTAAGAATTGTGCTTGTCAACGAGTATATTTTGAA
ATGACAATTTTGGGCGAATTTTTTAGGAATTTTTTTGTGAAAAATTCGCC
AAAAATCTTCATTTCAAAATATAATCGTTGATACGCATAATTCTTGATGT
ATTACTATCGTGTACATTCCTGCAAAGTTATATTAATAAACATCGAAGTA
CAAGCCAAGGAGAGCCTTTTTCTAAAAATGGGCGTGGCCTTGTAAATCTT
GATGACGTAATCATGACGTCAAACTAATTCACATAAATTATCACCCTGCT
ATAAGGTACTACCTGAAAAAAATTAAGGTTGAGGAAGATATATAAAACCT
AAGAAGGGTTGTTTTTTTTAATAACATCCCAAAAATCCTCAGCCACCCTT
CAATAGTACCTTGAATAAAGTTTCTAGAGAAGTCTTGGCGAATATTTTGT
CGTCTGGCTAAGGTTTGTTTGAAGCCTGTCTCAATAAACAATCTCTGTTA
CTGCTACTTTTACCAACTTGTAAGATATCTTTTTGGATATGTGATTTTAT
TTCTTTCTTTCTCCTGTAGATGTTGAGAAAGGGGAGCCGATTGTTGTGTT
TGAGTCGGAGGTGATTCAACCAGCTTCAGTTGAAGAGATAGTGGCGGAGT
CAGAGGAATCGGAAGAAGGTAACGTTGTTGATAAAACTGTACATAGATAT
GGAAACAGGACTTAAAGCCCTCCATTCTGCCCATGCAATCATCTTGTGGT
TTGCAAACCCCTTCTGGATCACAAAAGTGTGGGGTTTGAATCCCAACATT
ACACTCGAACCCAGTTCTGAGCGTTCACAATTCTCGAAAACGGAAGTAAT
GCGTCCTCATTTGGTAGTTTGAACTTTTTCATAACTGCAGGGTTATATCA
TCGATATACCACTGTTTCTAGTAGATTCGTAACATGTATGTATACGAATT
AGCCAAGCAGAGGTTGGTGGGGAAGATTGTGACTGGCATAAAGAAAGCGG
GACAGATGATAAAAAAAGTGACAATGAATCCCAACAGAGCTCNTGGAAAC
AGGACTTAAAGCCCTCCATTCTGCCCATGCAATCATCTTGTGGTTTGCAA
ACCCCTTCTGGATCACAAAAGTGTGGGGTTTGAATCCCAACATTACACTC
GAACCCAGTTCTGAGCGTTCACAATTCTCGAAAACGGAAGTAATGCGTCC
TCATTTGGTAGTTTGAACTTTTTCATAACTGCAGGGTTATATCATCGATA
TACCACTGTTTCTAGTAGATTCGTAACATGTATGTATACGAATTAGCCAA
GCAGAGGTTGGTGGGGAAGATTGTGACTGGCATAAAGAAAGCGGGACAGA
TGATAAAAAAAGTGACAATGAATCCCAACCGAGCTTTGCTTGGAGAGTAA
CGCTAACGTTATATACAAATATCACACCGTCCACTGTTTTCCTAATAGAC
CTGGGATATAAGAATCTCAGATATAGGGATCTAGGATATAAAAATCTCAG
TTATAAGAATCTAGGATATAAGAATCTCAGATATAAGAATCTAGCATATA
AGAATCTCAGATACAAGAATCGCAGATAATTACGAGAATCTCAGATATAA
GAATCTAGGATAAAAGAATCGCAGATATAAGAATCTCAGATATAAGAATC
TAGGATAAAAGAATCGCAGATATAAGAATCTAGCATATAAGAATCTCAGA
TACAAGAATCGCAGATAATTATGAGAATCTCAGATATAAGAATGCAGGAT
ACAAAAATCTTAGATCCTCCACTGTTTTCCTAACAGACCTGTGATATAAA
AATCTCAGATGTAAGAATCTAGGATATAAGAATCTCAGATCCTACACTGC
TTTCCTGACAGACGTGGGCTGTGCGTCGTTCGTCGCTGTCGAGTTCAGCA
CCTGTTACGCACGGTACCAGCACCGGGCATACAAGATCAGGAGAAGTGGA
AGGTTATCGCACAGAGCTTTCTGTCTGTGAGTATGGAGTTCATTTCCTTG
TTTATAGTAACACAATAGAAACAAACACATAAAGGATGCACAGATGAAAA
GTAACAGCCAGCCAAAAGGCTTTTTTGTCTCTTCCAACTTACTAAAGCCA
AAGATAACTAAGACATGCCTGTATGTTTTACGATAGTAGAGAGGCATTGC
ATCACATCAGTATCCGTATTACGATATTTTTTGTTGCAATTGAATTTATG
TCAGGAGGGAAATATCCTGACTTTTCTTGAAAATACAGCCTGTCTAGTTT
TATATCGCTTTCATATTCTTTACATCTTGTTTTATATCTCCAGGGCCCAC
TACGACTTGTACTCGTGCTACACCACTGCCTTACAGGAGTGCATCGAGAC
CGGGTTCACCAGATTCAGAAATGTCCTGGAGGCAGAGGCTAAGCTTATTC
TCCACAGGTGTCCACCTGCAGGTGTCTTACCCTGAGGAGCATCCACAGGC
TCTGTTCACACTACAGGGCTCGAAATTCGTTTTTGGAAAAAGGTACACTG
GTGCACCCAACCCAAACAATTAGGTGCACAGAAAGAATTTTCGGTGCACC
ACATAAGATAAACTTTATTAAGTTGAATGTCAGCAAAACATAAGTTTAAC
GCTACTGCCTCTCTTAAGAAATTTCAACCAAGCACTACATCAAATAAAGG
TTATTTTGCTTTTTCTGATACTTACATTTCAAGAATATTCTGCATTACTA
GTGTACAAGATCAAACCTTTACCCAAAAGAGTACAAAAATATCCAGGTGC
ACCAGTGCACCCACAGTCAAAAATTAGGTGCAGAGCCCCAATTTTGGGTG
CTCACAGGTGCACATGCACCCACTATTTCGAGCCCTGCACTAGCATGTCA
TGCTTTTATTGCCTGTTAACTACTGACTTTCAAATGAATGTTGCTTGCAA
ACATTATAACCAGAATGATTTGAATTACGGCATATATAAGGCTTCATACT
TTACCTTCATCCGCCAAAATTTGAGTTGGTTTCTAGGAGAGGCTGAAAAT
TATTGAATGCCCCTCGTATAGCTGGCGAATTGCTCTAGAAAATCATTCTC
TACTTGACCAATGTTTACTATCTTTTAGCAATCCAATAAGAGTCTGGTAG
GGTGTCTAGTGGTACCTATAGAAACCATTAGTTAGCAAGTTATGGCATCT
GTACCAGGCAGAGCTGGAAACTTGATATGAAGGCTATGTACGGATGATGT
TAGTAGCTATGCGAATTAATGTAAAACTTAAAATGTCTAAGTACAGTGTA
TATGCCGTTATGTGTGTAAGGAAAGATTGCATACGGCTCTTTAGTAGAAG
TGTTTGGTCATGATTATGCATTATGATGTATCTATATTGCGATTAAGTCG
GCCATCGGCAACATTCTCAATGCGTTGACCTACTAGTCTTAAATCATAGC
TATTAAGGTACTAATACTCATAACAGATTGTAGTACAGATACAATCTATG
TTAATAGATAAGTAACAATTTCAACATTACTGATAAGTTAGTGCTTAAGA
AAGTATGTTTGTTTAAGTGATGAGAATGATAGGTATGACTGTTTTGTGAA
TCCAGTGTAGACTGAGAATGTTAGACTGAATAAGCAAATAATTCAGATCT
TAATTACTTGTAAAGAAATATACAAGACGACAATATTGATGACAACAAGG
CAGTTTTTTTCTTTCATCATTCCAGTACATTTTTAAGTTGAACCAAAGCT
CATTACATTACAAACATTATTATAAAATCACCAAGACCAAAGCTGCTCAT
TTACAAAGCTTTCAATATTATCACGTACAGAAATAGCAATGATCAGTACT
TGTACGTTAAACAGAAATGCTCATTAATACCTTATTTACACTTATAAGCC
ATCAATACATAAAAACAAATTTATCAATGATCTAACAACAAACTTTGGAA
CGGACCAAAAAGGATAAATAATGGGGTTGAAATGACACTTGATGATCAAG
ACTAAAGACTGCAAATAATCATCCCCAAAAGTCAGTTAGATGTATATCTT
TTTAATGAGATCCTTGTAAAATTTTCCCCTGAAACTTTCATAATCGGATA
TTTAAATTCCTGTTTCCATACAATTTCTCTTGACCTTATACAAGAATTTT
TTTGCTGTTAGACAAAGTACTAACCTTAAGCTACCTGCGTTCTTTTTTAT
AAATAAGGACAAGCATTTGTTGTCAGTCAGCCAAAAATATACATAGTTCA
CAAACGGAAAGTTTCTAGGCTTTTACAACTATACGGGCAAGCAAGCTCAT
ATTACTTGGCATAGACAACATAATAACATTCATATTTTGTGATTTCCATT
TCCTCTTGGACAATAGAATCTGTCACAATAAAAACTAACTTTCTCTATTT
TTTTCCTTTGTCTTTATTTGTGTAAAACAAAGTTATCTCTTTTGAAACTT
CTTTTCAAAGCTATGTTTTGGTCTATATCCTACTGACATAATCAGTTTTT
TTATTGAATTTCCTTCATTTCACTGCAATTGAACCATATTAAATAGTTAG
TCCAGACATAGAAATACTGGCCATCATGGGGCAATTGTCGGATTACATGT
AGAGCTTCTTTCTTTTCAAGCAGCTACCCATTTTGGTATGTCTTCTTATA
AAAAGCACCAAAGAAATGAAATTAAGGTGGGGTACAGGCATGTGGCAGCA
CATTTTCAACAAAAATATTTTGACAAAATAACCATCTGATTTGTTAGATG
TATAGGTCTATTTTCATTATCTAGCATCATTTTCCTACAAAGGTTATCAG
TTTACCGCAAACTTCAAGGGCAAAGTTGCAGTTTCCAACGTCCTGGCTGG
GTGCCGATACCTTTTGGAACAGCCTGACCAATCAGGGGCCTCCATTTTGG
CTATTCCCTCCCTCCCTCTGGAAAGCTGGATTCTCTGGCCTGGCTGTAAA
CACTGCTCTGACTGTCAGATAGTGTGTTTGCAGAGGTTATTGACCCGTAT
GTCACTGTTAGTGCTTGCGTGATTGGGAAAAAAGCAAATAATGGCGATTT
GGGGTCATTTTACGATTACTAAATGCCAATTTTATTAATACTACCTCTAC
AGCATGATTTTAAAAGCAAAAGTTTGACAAAACTGTATATGATAGGGCAG
AAAAAGAAATGCTGTTCTGAGGTTTACCACCTGATCTTGCCTCTCACGGG
TGGCATAAGCATTTTGATACTTTGATAATGTGTGAGGGCCCACAGAAGGA
GGTTCTCATTAAATTATTGAAAAAAATTCATCAAAATTAATTCAAAAAGA
TATCAAAAAAGGAGCCCGTGTATTGACCAATGGCATTATTATGCATCTGT
CCCTAAAATATTAGCTTTGTACATTGGATCGTTAGCGAGGAAAAACCACT
TTTGTAAAAAGGGGCGTGGCCCTGTAATTGTTGATGACGTCATCATGACG
TCATAAAAATTTGCATAAATTATTGTCTTGCACAGAGGTACTTGGAGAAA
AAAAATCAAGAGCCACAAGTAACACTATATAGTATTTTCAAGACACCCCA
GAAGTGCTGCCGCATGCCTGCACCCCACCACTGACATTCAAACAAGCTAC
TTTTCATAGATTTAATCTTTACAATTTCTTGTATCATGAAATTTTTCCCT
GCTAATGGTTTAGTCTGTCTGTATCTGTATAGCCGCCCTTAGGCACAACA
TACGGAGTAATTATTGATATGTTTTGTAAGAACCGTTAGTGTCTACAGTT
AAGTCAGTTGAACTGGAATATACCATCTCTGGAAATGTATGAGGATTGTT
GTACAAAGTGGCAATACAATGTTCAGCAAAGGCAGTGTTAATGTCTAATG
TTGAGCCATCCCTGAGAAAAACACAATGAAGCACTTTTTTCCTGACTGTA
TGCTCTTTGTTTCTTTGATAGACGTGGTGTTTTCTGTTTCAGAAGAATAG
CGCTCTCTTATCTAAATACAATCAAG Coding sequence (CDS) from alignment at Sc0000000:2599925..2607950+ >BlTCONS00000348 ID=BlTCONS00000348|Name=BlTCONS00000348|organism=Branchiostoma lanceolatum|type=CDS|length=1026bp|location=Sequence derived from alignment at Sc0000000:2599925..2607950+ (Branchiostoma lanceolatum) GAGAAAGAGGAGGAGACAACAGAAGAAGCGGAGATGGAGAAAGAGGATGC GGAGACGACAGAAGCAGACCCAGAGAAAGAGGAGGGGCAGTCTACAGATA TGGTAGACCTTGAGGAAGACACGGTAGAAGTGGCTGATACGGAGACAGAG GAGACGACAGAGCTTGCTCCTGTTGGTGACGTTGCAGAAGCTGAGGTAAC AGAGCAGCCAGAGGCAGAGGGCCTCCCAGAGATCGAAGAGGGCACTGTGC CAGAGCTAGAGGAAGAAGAGACAACAGAAAGCGAGGAGACGACGACAGTT CCTACTCCTGTTGAGGTCGTTGCAGAAGCTGAAGTAACAGAGCAGCCAGA GACAGAGGGCCTCCCAGAGATAGAAGAGGGCATTGTGCCAGAGGAAGAAG AAGAAGAGACTACAGAAAGCGTGCCAGTAGTCGAGGTTCCGCTGGACGGG ACAGAGAGTGAGACAGAGGAAGAGGCAACGGCGCTACCCGACGAACCCGG GGAAACGGCTGCGGAAGTGAAGCCCGAGGAAGCAATGCCAGAGGCTGAAG CTGAGGAGGGCGAGGCTGACGATCGGACCCACCAGGAAGCCAGCGAGGAG GAGACCAACGTGATCGGACTGGCGGAGTTACGTCGACTCGGCTCAGACGC AGATCCCAATGGCGATACAGATGTTGAGAAAGGGGAGCCGATTGTTGTGT TTGAGTCGGAGGTGATTCAACCAGCTTCAGTTGAAGAGATAGTGGCGGAG TCAGAGGAATCGGAAGAAGACGTGGGCTGTGCGTCGTTCGTCGCTGTCGA GTTCAGCACCTGTTACGCACGGTACCAGCACCGGGCATACAAGATCAGGA GAAGTGGAAGGTTATCGCACAGAGCTTTCTGTCTGGCCCACTACGACTTG TACTCGTGCTACACCACTGCCTTACAGGAGTGCATCGAGACCGGGTTCAC CAGATTCAGAAATGTCCTGGAGGCAGAGGCTAAGCTTATTCTCCACAGGT GTCCACCTGCAGGTGTCTTACCCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000348-exon-Sc0000000-1564993656:2599925..2599939 | BlTCONS00000348-exon-Sc0000000-1564993656:2599925..2599939 | Branchiostoma lanceolatum | exon |
BlTCONS00000348-exon-Sc0000000-1564993656:2600150..2600515 | BlTCONS00000348-exon-Sc0000000-1564993656:2600150..2600515 | Branchiostoma lanceolatum | exon |
BlTCONS00000348-exon-Sc0000000-1564993656:2600780..2600920 | BlTCONS00000348-exon-Sc0000000-1564993656:2600780..2600920 | Branchiostoma lanceolatum | exon |
BlTCONS00000348-exon-Sc0000000-1564993656:2601631..2601778 | BlTCONS00000348-exon-Sc0000000-1564993656:2601631..2601778 | Branchiostoma lanceolatum | exon |
BlTCONS00000348-exon-Sc0000000-1564993656:2602594..2602692 | BlTCONS00000348-exon-Sc0000000-1564993656:2602594..2602692 | Branchiostoma lanceolatum | exon |
BlTCONS00000348-exon-Sc0000000-1564993656:2603886..2604000 | BlTCONS00000348-exon-Sc0000000-1564993656:2603886..2604000 | Branchiostoma lanceolatum | exon |
BlTCONS00000348-exon-Sc0000000-1564993656:2604318..2607950 | BlTCONS00000348-exon-Sc0000000-1564993656:2604318..2607950 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:2599925..2607950 + |
Properties
Property Name | Value |
GeneID | BlCUFF000196 |
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