BlTCONS00000341 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000341
Unique NameBlTCONS00000341
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:2512223..2514630+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000341 ID=BlTCONS00000341|Name=BlTCONS00000341|organism=Branchiostoma lanceolatum|type=mRNA|length=2408bp|location=Sequence derived from alignment at Sc0000000:2512223..2514630+ (Branchiostoma lanceolatum)
CCGACATGCTGAGCCAGATGATGAAGAACATTGCTGCGGAGAACCTGGCG GTGACACAGGAGCAGCGGGAGGAGGAGGAAATCATCCGGAGACAGAGCAA GCCTCTCCACGTCTGCGTCGTCAACACCTCGCGGTCCCCCGCCTACCACG TGCTCCCGTCTCTCGTGAACGGCGAGATTCTACGCGAGGAAGAGATTGCC TTGCACCTGCACGACTCCGAAGAGAACTTGGAGAAACTGAGAGGCTTGGA GATGGAGGTGTTTGACCTGTCGTACCCGTTCCTCAAGGAGATATCGGTGA CAACAGACCTCCTCACGGCATTCCAGAACGCACACGTGGCCATCGTATTT GACGATTTCGACCAAGGTGGAAAGGAGGATGCTATCGGAGACATGGAGGC TAAAGTGTCGTTCTACAAACGTGTTGCGGAAGCGATCAACCAAACTGCAA ACAAAGACATCCGAGTGCTTGTAGCAGGTACGGGGCCTCTGAACTCGTTG GTCGGTATCCTCATTGACCACACCCCCTCCATCCCCAAACAAAACATTGC AGCCGTGGCACAAGTGAAAGAGAGGCAAGCGAAGTCGCTGCTGGCAAAGC GGCTGGCGGTTAATTCTGCCGGAGTTTGTGACGTCATCGTGTGGGGGAAC GTTGGAGGCACCACGTATACAGACGTGTCGCGAGCAAGAGTGCATGGCTA CGATGGAGCTATCTGGGGACCACCGAGGTAAGACTGACTGGTCAAACTAG AGGGATGTACTTGTAGGTCACACAGATTTCACTAGATGTGAAAGATAAGG AACAGTGCTTGGTTGACAGGTGGTTAAGAAGTGCTCTTTTTGAAAGTTAC CAGTTGCTATAGCTCGTTGGATGTCTAGTCAACCTGTGTAACTATATCTT TGTAACTTTCCTTCAGCCTACGAGCTTAGCAGGCAACTAGAAGCATTTAG CTAACTTTCTACACCAAATGACTTGTCCTTGCAATCTAACTTCCAATGTT GTGTAAGGCTAATTAGTAATTGCTCTCTGGACCTTTTTTTTGGGGGGGGG GGGGTTATAATACACTTTTTGCTGATGACTTCTTTTTGTACTGGGTCGTT TGTGCAGCTGGACCGTACAAACAACCCAGTACAAAAAGAAGTCATCAGCA AAAAGTGTATCATGAGCCCCCAAAAAGGCCCAAGAGAGCCTGCTATGGAG GCTACACATTCTATAACACTGTTCACTTTTCCCAGCTACTCCTGTTCAGT GTCGGAGATGGTTCACGACAACAAGTGGCTGGAGGTAGAGTTTCTAGAAC AGCTACAGAGTCGCTCCAACACCACCCAGGAATCCTTGCAGCACGCCGCG GACCTCTCCATGGCTGCTGCCATCTCCAACACTCTCGGCTACTGGTGGAA TGGATCGCCCGAGGGACAGCTCTTCTCTCTGGCCGTCTGCTCAGAAGGTG AGCTAACTCAGAGTCTGAGAGCTACTTTTTAACCTTTGGCATACTGAAGC TGCCCTTTGGCTACCAATTCTCTTTTGGTTACGAGGTTAGGCAGCAGGGA GAAGGTTTAAGAACATTTATAGCAAAGCACAAAACAAATACTAGTAAACT GTTCATGCTTTAAAAAATTGCTGTAGTCCCTTGTTGAGTTTCTTTACATC ACAATCTCAGTGATAGTTCACAAAATCACACCGCCCAGCTAGCCAGAGAA ACATAATAAGCTCCAGCAAGGTACAATGCAATACAAAAAGTGTAGAAGAT AGTCAAACCTGTACAAGTGACCATTTCTACATAAAGACTACTTTGCGAAT GAGACTACTTTTTGCTGGTCCCTTAGATAATTTTCCTCATACACACAAGC ATTAAGAATCCTGTGTATAGTGACCACCTGTCCACGTACATTGTAGACCA TATTATGACGGTCCCTGAGTAGTTTTCTTGGGCAGTTTTGACTATGATAC ATTTCCAAGTATAAAATGTGATAGATAGACATCGAGTTTGAATTGTGATT GACAGATGTTGCTTCCTTTGAATGACAGGTTACTACAATGTCCCGGAGGG CGTGGTCTTCTCCTTCCCGGTCATATTCCACAAAGGCTCATGGGAGGTCG TGCAGGACATTGACATGAACGAGGACATGAGAGTCATGCTATCCAGCATC ACCGCTCAACTTTTAGAGGTGACTTTTGTTTGTTTGTATTGCATAACCGG TAAATCGCCTCATGGCGTAACACACCAGGTTTGTACTGAACAAGCTGCAT CTGCGGATAGATTTAATTGATCTACTCACACCGGGAAAGACCCCTGCTCT AATCTTTTCGATAAGCGTGGTGGGTTCTTTTATGTGCTAGAGGTGTGGCT CTCCTCCAACATGGGACCTTCATTTAACGTCCTATCCGAGGGATGTCCCT AGCAGAAG

Coding sequence (CDS) from alignment at Sc0000000:2512223..2514630+

>BlTCONS00000341 ID=BlTCONS00000341|Name=BlTCONS00000341|organism=Branchiostoma lanceolatum|type=CDS|length=1179bp|location=Sequence derived from alignment at Sc0000000:2512223..2514630+ (Branchiostoma lanceolatum)
GACATGCTGAGCCAGATGATGAAGAACATTGCTGCGGAGAACCTGGCGGT
GACACAGGAGCAGCGGGAGGAGGAGGAAATCATCCGGAGACAGAGCAAGC
CTCTCCACGTCTGCGTCGTCAACACCTCGCGGTCCCCCGCCTACCACGTG
CTCCCGTCTCTCGTGAACGGCGAGATTCTACGCGAGGAAGAGATTGCCTT
GCACCTGCACGACTCCGAAGAGAACTTGGAGAAACTGAGAGGCTTGGAGA
TGGAGGTGTTTGACCTGTCGTACCCGTTCCTCAAGGAGATATCGGTGACA
ACAGACCTCCTCACGGCATTCCAGAACGCACACGTGGCCATCGTATTTGA
CGATTTCGACCAAGGTGGAAAGGAGGATGCTATCGGAGACATGGAGGCTA
AAGTGTCGTTCTACAAACGTGTTGCGGAAGCGATCAACCAAACTGCAAAC
AAAGACATCCGAGTGCTTGTAGCAGGTACGGGGCCTCTGAACTCGTTGGT
CGGTATCCTCATTGACCACACCCCCTCCATCCCCAAACAAAACATTGCAG
CCGTGGCACAAGTGAAAGAGAGGCAAGCGAAGTCGCTGCTGGCAAAGCGG
CTGGCGGTTAATTCTGCCGGAGTTTGTGACGTCATCGTGTGGGGGAACGT
TGGAGGCACCACGTATACAGACGTGTCGCGAGCAAGAGTGCATGGCTACG
ATGGAGCTATCTGGGGACCACCGAGCTACTCCTGTTCAGTGTCGGAGATG
GTTCACGACAACAAGTGGCTGGAGGTAGAGTTTCTAGAACAGCTACAGAG
TCGCTCCAACACCACCCAGGAATCCTTGCAGCACGCCGCGGACCTCTCCA
TGGCTGCTGCCATCTCCAACACTCTCGGCTACTGGTGGAATGGATCGCCC
GAGGGACAGCTCTTCTCTCTGGCCGTCTGCTCAGAAGGTTACTACAATGT
CCCGGAGGGCGTGGTCTTCTCCTTCCCGGTCATATTCCACAAAGGCTCAT
GGGAGGTCGTGCAGGACATTGACATGAACGAGGACATGAGAGTCATGCTA
TCCAGCATCACCGCTCAACTTTTAGAGGTGACTTTTGTTTGTTTGTATTG
CATAACCGGTAAATCGCCTCATGGCGTAACACACCAGGTTTGTACTGAAC
AAGCTGCATCTGCGGATAGATTTAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000341BlTCONS00000341-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000341-exon-Sc0000000-1564993656:2512223..2512949BlTCONS00000341-exon-Sc0000000-1564993656:2512223..2512949Branchiostoma lanceolatumexon
BlTCONS00000341-exon-Sc0000000-1564993656:2513458..2513669BlTCONS00000341-exon-Sc0000000-1564993656:2513458..2513669Branchiostoma lanceolatumexon
BlTCONS00000341-exon-Sc0000000-1564993656:2514251..2514630BlTCONS00000341-exon-Sc0000000-1564993656:2514251..2514630Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:2512223..2514630 +
Properties
Property NameValue
GeneIDBlCUFF000191