BlTCONS00000339 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000339
Unique NameBlTCONS00000339
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:2510283..2511846+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000339 ID=BlTCONS00000339|Name=BlTCONS00000339|organism=Branchiostoma lanceolatum|type=mRNA|length=1564bp|location=Sequence derived from alignment at Sc0000000:2510283..2511846+ (Branchiostoma lanceolatum)
CTGGGCACGAGTTGCCTAGTAACCACAGTGTACACGGTGAACAAGATGGC
GAAGTTTGTGATTGCAGGTAAGAGTGCAAAAATTAGAGGTTTTCTCCGCT
CTACACGTTTGATGTCTGTTTTATGTACCATATCACGAAATTCTAGAGGA
AGATGGTCTCCTCTTTTCAAATATCTACTTATGTCGTTCATTTTAGAGTT
GAAAATCGAGATGTGATTTTACAGAAGTCCAGATCTAGAAAGGAAGAACG
CCCCCCACCCCCATGACAAAAACTAAGATGATATAGCCTACCCCTTGCTA
CTACTTCAATCAGAAACTCTAGGAGGTAATCAGGACAGTTTGCCTTGGTT
CATCCACAGAAGTTTAGGTGCCATAATTTGCAAGTCTCAAGCTTTTTTTA
CGTAAGTCAGGGCTTTTGTGCAATATCAGTTGGCTTCAACCAAGGAGCTT
TAAACAGATCTACTCTATTTTGCTATCCAACTGTAGGGACTACCCTTTTT
TAGATATTTAAGATCAATAACTAAATCAATCGATTTTTTTCTACACTTTT
TGACACTGCACATGCGTAGTTGGAATTACGAATGGGCTTATAAGTTAGCT
CTCAACCCAGTTCATTTTTTTTTTTGCATTGAAACTTGTATACTCTGTTC
CTTGTTGACTGCAGGCCAGGCTGACTGCCCCTACTATGCCAAAGTGGAGT
TGTTGGCTGACAGTTTACAGTCAAAGCTGGCAGACTTCCACGTCCACAAG
ATAGTAAAGACTCCAGAGGAATGGAAGGTATGACACAATAACTATGTTTC
TATTACCTTAGCACCTTAGTTCCTCCCGTGCCTTTGAGGCACATCGGGCC
ATTCTTTTCCACCTTCCTCGGTTCTGCGCTATCTATCTATACTATCAAAA
TAATGGTATTCATGTAACTCTGCGGTAGAGGTGGAGAAGACTTTTTGCGG
TGTGTACATAAACCCACCATGACAGTTGATTGAAAAAGAATTTAACAATG
AAGAGCGGTCTAAACTGGAACAGTCCTACCTGACCGAAAACTCTACTCTA
CTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTA
CTCTACTCTTCTCTACTCTACTCTACTCTACTCTACTCTACTCTACTCTA
CTCTACTCTACTCTACTCTACTCTACATGTATGTTCTTCAACACACACAC
ACACACCCACACACACACACTACATATGTACATGTACATTGTATACTACT
ATGCTGAATACACTCAAAGTCAAGTTCTCACTTGTTTTATGACATACGTT
CGTCGTAGTTCAGGGCTCTCCAGCGTTTGCAACTTGCACCGTGCTGACGG
CTATGCTTTGTATACTCAATACTTCAGTGTGCTAAAGGTTAAGTTAACAT
TAACCTCCATGCTGTGTTTCGTTGTGCAGCCCTGGCTGCAGCAGCTGTGT
GGAGACAACGGCTGGAGCCACGGCAGGTCCCCCATCATCTGGAGAGAACT
GGTGGACCGGGGAGGCAAGGGTCTCCTCATCGGTGGACACAACGACTTTA
TGGAGTATGCCAGG

Coding sequence (CDS) from alignment at Sc0000000:2510283..2511846+

>BlTCONS00000339 ID=BlTCONS00000339|Name=BlTCONS00000339|organism=Branchiostoma lanceolatum|type=CDS|length=315bp|location=Sequence derived from alignment at Sc0000000:2510283..2511846+ (Branchiostoma lanceolatum)
CTGGGCACGAGTTGCCTAGTAACCACAGTGTACACGGTGAACAAGATGGC
GAAGTTTGTGATTGCAGGCCAGGCTGACTGCCCCTACTATGCCAAAGTGG
AGTTGTTGGCTGACAGTTTACAGTCAAAGCTGGCAGACTTCCACGTCCAC
AAGATAGTAAAGACTCCAGAGGAATGGAAGCCCTGGCTGCAGCAGCTGTG
TGGAGACAACGGCTGGAGCCACGGCAGGTCCCCCATCATCTGGAGAGAAC
TGGTGGACCGGGGAGGCAAGGGTCTCCTCATCGGTGGACACAACGACTTT
ATGGAGTATGCCAGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000339BlTCONS00000339-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000339-exon-Sc0000000-1564993656:2510283..2510349BlTCONS00000339-exon-Sc0000000-1564993656:2510283..2510349Branchiostoma lanceolatumexon
BlTCONS00000339-exon-Sc0000000-1564993656:2510947..2511059BlTCONS00000339-exon-Sc0000000-1564993656:2510947..2511059Branchiostoma lanceolatumexon
BlTCONS00000339-exon-Sc0000000-1564993656:2511712..2511846BlTCONS00000339-exon-Sc0000000-1564993656:2511712..2511846Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:2510283..2511846 +
Properties
Property NameValue
GeneIDBlCUFF000190