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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:2481227..2487894+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000334 ID=BlTCONS00000334|Name=BlTCONS00000334|organism=Branchiostoma lanceolatum|type=mRNA|length=6668bp|location=Sequence derived from alignment at Sc0000000:2481227..2487894+ (Branchiostoma lanceolatum)
CACGCTTTTCCGGACATATTTCGTCCCATTTCGTGCTAAAACTTGCCTGT
ACAGAAACGACAAGATGGGAGCGGTTATTACACGCTTCAAAGTAAGTCCA
GACCTTTTNGTCTCTGCTAACATTTCACGCTTTTCCGGACATATTTCGTC
CCATTTCGTGCTAAAACTTGCCTGTACAGAAACGACAAGATGGGAGCGGT
TATAACACGCTTCAAAGTAAGTCCAGACCTTTTTTGTGCGATGTCACGGC
GCTGACATATTGTCGAGCGGAAGTTTGAATGACTTATGTATGATGTTGTT
CCCAAAATATTATAATATTTTGCTTTGTCAAATTATACTTATAAACAATG
CCAGTTTTAAAGACAAAAATTAGAGCTTAAACAATAATTAAAATTTGTTT
AAAGATTTTTTGTTAACGTTGTATTTTGCGTTAGAGATATNATTTTGCGT
TAGATATATTCTGTGTTGAAATGTTTTGAAAGCGTTTTGCTTGTGTAGCA
ATTTGTGACTCCTATTATAATATTCATAACGTTGACGTCAGCAAAAAAGT
AGATGAAAATTCATGTGTTGAACTGTATATTCCATGATCCTGTTTTTTTT
TTCTTCCATAGAAAAAGCAAACTACAGTAGAAGTGCTTGAAGGGCTAGAT
AAGGTATGTATCATAAGACAAGACAAGACAAGACTATAACTAACGTTAGT
ATAACTATAAGTATAGTCTATTTTCATAAATTGTCAACATCAATATTGTC
GTATTAACAAGAACATGTCAAAAACTGCTTGATAGTATTGTAACATAATC
CATTTGTGGCAGTATGCTAGCCAGTACATTTGCCAGTTGATGTCATACAA
AATATATTCAAGTTGCCATCATTTGATTTCTTTGTAAAATTCAATGTCAG
ACAGTTTTGGTGTTTCCATTTTTGTGTGTCATGTCATGCAATTATGATGG
TCATGATGTCATTCAAAAGGTATTTTTGGTGATTTGGGTAAAAAAACTGA
TTTGGGAAAATATTGGTCATGCAAGGAGACGTGTTGATTTTTGCATATTC
TAAGTAAGGTAAAAGAATATTTTATTATATGTTGACGAGCAGCCAAATTA
TGAAAAATCATGTTAAATTGTTTTATTTTTTCCTCACAAAAAGAGATGGC
AGAGAAAAGATTTTTGTAGCAACAATTTAACCATTGGATTCAGTGGGCAT
GTCTTGACCTAAATTCCTTGTGGGAAGTTTAGAAAGGAATTTAGGTCAAG
ACATGCCGACTGCATCTATACTTAGCGGGCCTAAGTAAAACCTTGTTCTA
TCTATGTCATGTAGGCCAGAGCTGTAGACAGTGACTCTAACTGTAAATGT
TTGCAGTGGTATTATTTTTGCATTAAGGTCTCCACTGCGAATATGCCTTC
CCGATGTATAGATACTGAACTACTTTCCAACTGCAAACTTAGAACAGTGT
GAAAATCTCTTTTCACTTTATACTGCAAAGTTATACATTAAGTCCCCACA
AAAATAAAATCAATCTACAATTGTTGGGACTCAGATCTAGACTGCTGTGA
AATCAACTTGTAATGTTGAAATTTTCGCTGTGGCTTAATGTTTGCTGGTT
CCAATTAGTTGGTAACTGGGAGACCCCCGGTACAACCCTGGGTCAGGACA
TCTCAGTTGGAGCTGCACTCGTCTTCCAAAAGGGACGTAAAATGGGGGAC
CCATGTTCAAGTAGGCACCTTGAAAATTTTGAAGGGGAAGGACTACTAGT
AGCAATTCCTACATGTAAAGATATATCCCTTCGACAGAAACAGTAAGGAA
ACTTGCTGCCATAGATACCACTAGGTACTACTGGGTGAACAATGACAACA
ACACAAAACCATTTCTTCCTGCATATTTTGAATACCAGACAGGTAATTTG
ACAGTAGACAGGATCAAGTGTCTAGAACAGTGATAACCTTTCACACCCTA
AACGTGATTAAATGGAAACTATGCTCATGTGCTTTTATCCATAAATCTGT
AGGCATTGGAGAAATGTGTTTTTTCCTGTTAGTGTTACTGAGAGGTTATG
TCAACATAGCATTCGATCCCTCTGTTATTGAAATACGCTAATTATAGAAT
GATGGGATGGGTTGACATGGGGTGAATCAAGGACAGTGGTGTTCAATTCA
ATTGATTAGCAATATCATGTAAAACTTAAGCCACTAGCTATATAGCTGAC
TTGATATGTGCTTTATTTTATTTGCTTTTAACTTTAGAACTGACAGAAAT
TGAATCCGTTTCTTTCTTTAATGTATTTAAAATAAATGAAGGAGGACAAT
ATAACAAGAAAAATGTTACCACGAAATTGTTCACAATGCCATTGATTATA
CATAAATGCTTGTTTACAGTTATGCACTTTTTTCTTAAAGTGGACAAAAC
CTGAAAGGTGGTGCACCTAACCTGAAGATTTAGATGCACAGAAAAAATGT
GGTTGTACAACATAAAATAAAGTAGAATGTCAGCAAAACATAATTACAAG
CTTAAAGTTACTGCCTCTCTCCAGAGCTGGAATCTTCAATTCTATATAAA
AGCTAACTTCAAATTCTAAACATGTACAGCAAAGGTTTTACTACTTTTTC
TTGATACTTGTACAATTAGTCAATACCTAACCCTACAAAAAATGTTTAGG
TGAACCAGGGCACCCACAGTCAAAAATAAGGTACATAGCTTTAATTTTTG
GTGCACACAAGTGCATATGCACCCAGTATTTCAAACCCTGGAAGCATTAG
AAAAGATATGAATTTTTGATCGTGCAGTATTTTTTTCCAGGAAATCCAGA
GCTTGATATTAGAGCAGTTCAAACAAGGTGCAATTTTGGTGGGTGCATAT
GCTCTCAGTATTTTGAGCCCTTGACGTTTGAAAAAAGTTTTGATCGTGCA
ATATTGTTGTTTCAGGAAATCCAGAGCTTAGAGCAGTTCAAACGTCACAA
TGAGGAGTTGCAGAGACGTTACGTGGGCGGGCTGCTGATCTACTCCATCG
TGTTGTACATCGCTGCTGCCGTCATGTTCTACTTCCTGTTCTTCCCCGAG
GGCTGGCAGGAACGCGTCGTCCGATCACTACCTCTGCTCACCTTCCCACT
GCTGTGAGCACTTGTTTGGTTGCTTGTTTGTTTTTTTTGTTTTTTTTGTT
GGTTCGCCTAATGCTTTGGTCCCATTTCCAAAGCGGGGCCCGGCCCGCAG
CTTGTGGGAATGAAAAATGTGATACATTGTATGACAACAAAAGACACAAA
ACGTAAGAAAAATTACTTGAAATGCATTTTTTATTTTTCGTATTCGTAAA
ACAGCCCGGCCGGGCCCCGGATTGGAAATGGGACCAAAGCATAACCAGTA
AGTCACCAGAACACACCAGTTTTGTACTGTATATACAAGCTGCAAAAGAT
CCGACCATTTGATCCAGGAAGAATGCCTACTGTTATCGATAGGTGTGGTG
GGTACTTGAGCTGTGGCTTCCTTCAAACAAGTCAACAATCATAACCACAG
GGCCATCATACCACCAAAGTTCTTTAAATGGGATACATTTTGTTGATATA
ATGATGTGTCCATATTGGCCAAAGTGGTCAGTTTGTAAAGTTTTCTTCTT
CATTGATTTTTTTCAGAATATGGGCCGTCAAGAAGCTACTTCATTGGTAC
TTTGTAAGAAGAATCACAAAGAAAGGTACTTAAAAGAGATTGAAGATCAA
GATATGTTGATATATGTGTTGTGTTTGCTTTATTTGTAGTTGTAACTGTA
AGATGGCAAAAAACATGTAAAAATATAACATCATGTTTGATCTTCGAATT
TTAATTTACAGTGCTTTTCAATAATCCATCAGATGATAGGCACACTACGT
CTTTATGTGAAATGTTTGTTTTTACTGTTGTCTTTTTCTAGAAAGTCAGC
TTGGAGACCTGAGAGAAAAGAAGAAAGGCATTGTAAGTTCCTATTGGTTA
AATCTGTTACATTCATGAAACTAGAGCAAATCTAGAAAATACTCTTGTAT
ACATTGACCCCAAGTCTATGAAACAAATGTACATATTTCAGATTCTATTT
CCTTGTCCTCAACTTTTCCTTGTTATGGTGTGCAGGTTTAGCATTTGTAA
GCACATGTTTATTTTATGTTGTTTTGTATACCCAGTAAACCACCTTTTGG
CATAACACATCTGTTTTGTACTGTACTAGCTAGTAGGTACAAGCTACGTG
GAACCTCTCATTGGGATGGATCCCTTCTCTTTTTGCAAGTGTGGTGGGAT
CTATCTGTATAGCCGGTATAACCGCCCTTCGGCATGACACACCAACTTCG
CAGGCATGCAGCGCGGCAGCAGCTGGTTATATCACACCGAACGACCTGTC
AAGTCTTTAACATGCTCAAGGTGTTGGTCTCCTCAAAAACGGGAATCCTA
GATTTACGTCCCATCCGAGAGGAAGATCCTAACCAAAGCTACTTTCACCT
GAGTCAAGTGAGGAAATAGGTGTCTTTCTCAAGGGCACAGCATTGGGACC
TGCCTAGGATTTGGCCAAGACCTTTAGATTTATTAGACAACATCCCTTTT
GTTTTCACAAGACCATCTTGCCACCTGCTATGTGAACTTAAGAACTTCAG
AACAACATAATTTATCTTTCTGCAGCTAGAAGATGTGATGGAACATGAGA
CGTACAAGGCAGCCAAGGAAATTCTGGAGAGATTTGGACCAAGTAAAGAG
GAGGTAAAACGCTTTCTCTCAAATAGCCTGCCATGATACACAAAAATGTG
CTTATGAATATGTAAAACCCTTAAAGTAAGATGCTACACATAGGAATGAA
TGAACAAACGAATGGATGAACGAACGAATGAATGAATAAATAAATGGATG
AATGGATAAATGAAGAGGTATCTGGGGTGTGGTCTTCCTACCCATAGTCA
AACATTAGATCACCTGGTTCCAGACTGTATTGATAGAGATGTGCCTTGAG
GTGATTTTTTTCTAGTGCCTGTATTATTTTCCCCAGGCGACTCCTGAGAC
TCCACCAGGCAGCCCCAGAAGACAACCCGGGCCCCCCGTCCCCACCCCAG
TACCTCCTGGGCAAGGTAGGGCAACGCTTTGTCCACATGTATTGTGATCC
TTGTGTATTATGTCTTGGCATTGTATTTGTATCCAGGGAGCCTGAAAAAC
AGGTCAAGAGACCTGAGTGTGTCCGCTGGTTAAATAGATAAATGAAATGA
ATGAATGAATTGTAGATATTGTAACAGTGTAGTTCAAGCGCCACTTACTG
ACCAGTCTAACTGGTCCTGACCTTTTAGCCTAGTGGTAAGTGCGTTGGGC
GGTGCGCTGGCTGGCCCGGGTCTGATCCCCGGGAGTCAGGAGACTGTGCT
ACTCGATTCGTCCGTTTCAATATGCATGGTTTCATAATACAGAGCTAAAA
CTTCCAACACAATAAGTAAGACCATCACATTTTGCATGGTCCTATGCAGT
CTTCTTCAGAATCCAATGGATCTATCAAAGGACTTTACTTACAAAATTGT
CTCTAATTGTTTCTTGCATATACCAAGAGAATGCTAATTCTGTAAAGGAA
AAACACAGGTTTGGCATGTTAGGATTTTAAACCCTTGATTGACGTCGACA
AAAATAAATGAATATTTTCACAGCTATCTTAATATTGACCCCAAAAATGG
CAATTTTTATACTATAGCCTGACATTGATCAAAACAGGTGAAACTTTATA
GTATTTCTATACACCCTAGCTGAAAGAAGTGACAAAGCAGACAAACCAGT
GCCCAAATCCCTCAGAAACCACCTACACAGACATAGAGGTATGACATTAG
ATCACAGGTACTACTGGTGACTAACCTGGGAGGTGGTTTCCCTTCTTTTA
CTAAAGATACATTTGTCTAATAAGCTGGACACACTGGTGGCAGTTGTTAG
GCCAGACAAATATGATTTTATGGATGACATCCTCTGGAAACCTAAATCTG
AAAGAACAGCTTTTTTTTGCACTTAAGAGGGTATTCTGTGGCATGTTTTT
ATCTTGATGACTTTTTCATGTGAATTCAGTTTTAGAAAGGATTCACATGG
AGTCAAAAAAGGGCCATATTTTTTGCTAAAAAAAAAAGGCCCAAGTCAAC
TCATATGGATGTTATCCATAGAATGGTGCGGCCTATTGCCTCTGCACTTT
CACTATACCGTAACAACATTTCAGTAAGGGACGGTTTCGCACCAGACTCA
CACATACTTACAACATGTTGGTTCAGCCACACATCACTATTACCACAAGG
TTCTCTTGGTGGGTAAACCTAAGGAACACCTTTTGCACTGGTGTGGTTGA
ATGTGGTGGTGAATAGATTTAGCTTGGGTGCTGTCTTCCGTAGTAACTGC
TGGCTAAATCTTTTCGCTTGCTAACCGCGGAGTCTGAATTGTGGTTAACA
AACAAAAACATTGACCCAGTGGTTACTACTGTAACAGAGGATGGCACCCA
GGCTATGGGTTTAGCACTCTTACTCATACACTTGCAGTTACGTGTTCCGA
AACGGCATCCAGTGATACCGTATTTGTCTTTCTTGCAGAGTTGCGCCAGC
GGCGAACGCCGGCGCCGCCACCTGCCCAGCCCAACATCCCCCGCTTGGCG
GTGGCCCCTACGAGAGTGGAGACTCCACCCCAGGGTACCCCTGCACTCCC
CCGACCCCCTGGGCACCT Coding sequence (CDS) from alignment at Sc0000000:2481227..2487894+ >BlTCONS00000334 ID=BlTCONS00000334|Name=BlTCONS00000334|organism=Branchiostoma lanceolatum|type=CDS|length=774bp|location=Sequence derived from alignment at Sc0000000:2481227..2487894+ (Branchiostoma lanceolatum)
ACGCTTTTCCGGACATATTTCGTCCCATTTCGTGCTAAAACTTGCCTGTA
CAGAAACGACAAGATGGGAGCGGTTATAACACGCTTCAAAAAAAAGCAAA
CTACAGTAGAAGTGCTTGAAGGGCTAGATAAGGAAATCCAGAGCTTAGAG
CAGTTCAAACGTCACAATGAGGAGTTGCAGAGACGTTACGTGGGCGGGCT
GCTGATCTACTCCATCGTGTTGTACATCGCTGCTGCCGTCATGTTCTACT
TCCTGTTCTTCCCCGAGGGCTGGCAGGAACGCGTCGTCCGATCACTACCT
CTGCTCACCTTCCCACTGCTAATATGGGCCGTCAAGAAGCTACTTCATTG
GTACTTTGTAAGAAGAATCACAAAGAAAGAAAGTCAGCTTGGAGACCTGA
GAGAAAAGAAGAAAGGCATTCTAGAAGATGTGATGGAACATGAGACGTAC
AAGGCAGCCAAGGAAATTCTGGAGAGATTTGGACCAAGTAAAGAGGAGGC
GACTCCTGAGACTCCACCAGGCAGCCCCAGAAGACAACCCGGGCCCCCCG
TCCCCACCCCAGTACCTCCTGGGCAAGCTGAAAGAAGTGACAAAGCAGAC
AAACCAGTGCCCAAATCCCTCAGAAACCACCTACACAGACATAGAGAGTT
GCGCCAGCGGCGAACGCCGGCGCCGCCACCTGCCCAGCCCAACATCCCCC
GCTTGGCGGTGGCCCCTACGAGAGTGGAGACTCCACCCCAGGGTACCCCT
GCACTCCCCCGACCCCCTGGGCAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000334-exon-Sc0000000-1564993656:2481227..2481241 | BlTCONS00000334-exon-Sc0000000-1564993656:2481227..2481241 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2481367..2481442 | BlTCONS00000334-exon-Sc0000000-1564993656:2481367..2481442 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2481838..2481879 | BlTCONS00000334-exon-Sc0000000-1564993656:2481838..2481879 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2484142..2484329 | BlTCONS00000334-exon-Sc0000000-1564993656:2484142..2484329 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2484843..2484901 | BlTCONS00000334-exon-Sc0000000-1564993656:2484843..2484901 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2485118..2485158 | BlTCONS00000334-exon-Sc0000000-1564993656:2485118..2485158 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2485852..2485929 | BlTCONS00000334-exon-Sc0000000-1564993656:2485852..2485929 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2486213..2486291 | BlTCONS00000334-exon-Sc0000000-1564993656:2486213..2486291 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2486946..2487014 | BlTCONS00000334-exon-Sc0000000-1564993656:2486946..2487014 | Branchiostoma lanceolatum | exon |
| BlTCONS00000334-exon-Sc0000000-1564993656:2487765..2487894 | BlTCONS00000334-exon-Sc0000000-1564993656:2487765..2487894 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:2481227..2487894 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000185 |
|
