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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:2481178..2487894+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000331 ID=BlTCONS00000331|Name=BlTCONS00000331|organism=Branchiostoma lanceolatum|type=mRNA|length=6717bp|location=Sequence derived from alignment at Sc0000000:2481178..2487894+ (Branchiostoma lanceolatum)
AGAAAATGGCGGACGAACTGAAACGGTAGTAGCGTCTCTGCTAACATTTC
ACGCTTTTCCGGACATATTTCGTCCCATTTCGTGCTAAAACTTGCCTGTA
CAGAAACGACAAGATGGGAGCGGTTATTACACGCTTCAAAGTAAGTCCAG
ACCTTTTNGTCTCTGCTAACATTTCACGCTTTTCCGGACATATTTCGTCC
CATTTCGTGCTAAAACTTGCCTGTACAGAAACGACAAGATGGGAGCGGTT
ATAACACGCTTCAAAGTAAGTCCAGACCTTTTTTGTGCGATGTCACGGCG
CTGACATATTGTCGAGCGGAAGTTTGAATGACTTATGTATGATGTTGTTC
CCAAAATATTATAATATTTTGCTTTGTCAAATTATACTTATAAACAATGC
CAGTTTTAAAGACAAAAATTAGAGCTTAAACAATAATTAAAATTTGTTTA
AAGATTTTTTGTTAACGTTGTATTTTGCGTTAGAGATATNATTTTGCGTT
AGATATATTCTGTGTTGAAATGTTTTGAAAGCGTTTTGCTTGTGTAGCAA
TTTGTGACTCCTATTATAATATTCATAACGTTGACGTCAGCAAAAAAGTA
GATGAAAATTCATGTGTTGAACTGTATATTCCATGATCCTGTTTTTTTTT
TCTTCCATAGAAAAAGCAAACTACAGTAGAAGTGCTTGAAGGGCTAGATA
AGGTATGTATCATAAGACAAGACAAGACAAGACTATAACTAACGTTAGTA
TAACTATAAGTATAGTCTATTTTCATAAATTGTCAACATCAATATTGTCG
TATTAACAAGAACATGTCAAAAACTGCTTGATAGTATTGTAACATAATCC
ATTTGTGGCAGTATGCTAGCCAGTACATTTGCCAGTTGATGTCATACAAA
ATATATTCAAGTTGCCATCATTTGATTTCTTTGTAAAATTCAATGTCAGA
CAGTTTTGGTGTTTCCATTTTTGTGTGTCATGTCATGCAATTATGATGGT
CATGATGTCATTCAAAAGGTATTTTTGGTGATTTGGGTAAAAAAACTGAT
TTGGGAAAATATTGGTCATGCAAGGAGACGTGTTGATTTTTGCATATTCT
AAGTAAGGTAAAAGAATATTTTATTATATGTTGACGAGCAGCCAAATTAT
GAAAAATCATGTTAAATTGTTTTATTTTTTCCTCACAAAAAGAGATGGCA
GAGAAAAGATTTTTGTAGCAACAATTTAACCATTGGATTCAGTGGGCATG
TCTTGACCTAAATTCCTTGTGGGAAGTTTAGAAAGGAATTTAGGTCAAGA
CATGCCGACTGCATCTATACTTAGCGGGCCTAAGTAAAACCTTGTTCTAT
CTATGTCATGTAGGCCAGAGCTGTAGACAGTGACTCTAACTGTAAATGTT
TGCAGTGGTATTATTTTTGCATTAAGGTCTCCACTGCGAATATGCCTTCC
CGATGTATAGATACTGAACTACTTTCCAACTGCAAACTTAGAACAGTGTG
AAAATCTCTTTTCACTTTATACTGCAAAGTTATACATTAAGTCCCCACAA
AAATAAAATCAATCTACAATTGTTGGGACTCAGATCTAGACTGCTGTGAA
ATCAACTTGTAATGTTGAAATTTTCGCTGTGGCTTAATGTTTGCTGGTTC
CAATTAGTTGGTAACTGGGAGACCCCCGGTACAACCCTGGGTCAGGACAT
CTCAGTTGGAGCTGCACTCGTCTTCCAAAAGGGACGTAAAATGGGGGACC
CATGTTCAAGTAGGCACCTTGAAAATTTTGAAGGGGAAGGACTACTAGTA
GCAATTCCTACATGTAAAGATATATCCCTTCGACAGAAACAGTAAGGAAA
CTTGCTGCCATAGATACCACTAGGTACTACTGGGTGAACAATGACAACAA
CACAAAACCATTTCTTCCTGCATATTTTGAATACCAGACAGGTAATTTGA
CAGTAGACAGGATCAAGTGTCTAGAACAGTGATAACCTTTCACACCCTAA
ACGTGATTAAATGGAAACTATGCTCATGTGCTTTTATCCATAAATCTGTA
GGCATTGGAGAAATGTGTTTTTTCCTGTTAGTGTTACTGAGAGGTTATGT
CAACATAGCATTCGATCCCTCTGTTATTGAAATACGCTAATTATAGAATG
ATGGGATGGGTTGACATGGGGTGAATCAAGGACAGTGGTGTTCAATTCAA
TTGATTAGCAATATCATGTAAAACTTAAGCCACTAGCTATATAGCTGACT
TGATATGTGCTTTATTTTATTTGCTTTTAACTTTAGAACTGACAGAAATT
GAATCCGTTTCTTTCTTTAATGTATTTAAAATAAATGAAGGAGGACAATA
TAACAAGAAAAATGTTACCACGAAATTGTTCACAATGCCATTGATTATAC
ATAAATGCTTGTTTACAGTTATGCACTTTTTTCTTAAAGTGGACAAAACC
TGAAAGGTGGTGCACCTAACCTGAAGATTTAGATGCACAGAAAAAATGTG
GTTGTACAACATAAAATAAAGTAGAATGTCAGCAAAACATAATTACAAGC
TTAAAGTTACTGCCTCTCTCCAGAGCTGGAATCTTCAATTCTATATAAAA
GCTAACTTCAAATTCTAAACATGTACAGCAAAGGTTTTACTACTTTTTCT
TGATACTTGTACAATTAGTCAATACCTAACCCTACAAAAAATGTTTAGGT
GAACCAGGGCACCCACAGTCAAAAATAAGGTACATAGCTTTAATTTTTGG
TGCACACAAGTGCATATGCACCCAGTATTTCAAACCCTGGAAGCATTAGA
AAAGATATGAATTTTTGATCGTGCAGTATTTTTTTCCAGGAAATCCAGAG
CTTGATATTAGAGCAGTTCAAACAAGGTGCAATTTTGGTGGGTGCATATG
CTCTCAGTATTTTGAGCCCTTGACGTTTGAAAAAAGTTTTGATCGTGCAA
TATTGTTGTTTCAGGAAATCCAGAGCTTAGAGCAGTTCAAACGTCACAAT
GAGGAGTTGCAGAGACGTTACGTGGGCGGGCTGCTGATCTACTCCATCGT
GTTGTACATCGCTGCTGCCGTCATGTTCTACTTCCTGTTCTTCCCCGAGG
GCTGGCAGGAACGCGTCGTCCGATCACTACCTCTGCTCACCTTCCCACTG
CTGTGAGCACTTGTTTGGTTGCTTGTTTGTTTTTTTTGTTTTTTTTGTTG
GTTCGCCTAATGCTTTGGTCCCATTTCCAAAGCGGGGCCCGGCCCGCAGC
TTGTGGGAATGAAAAATGTGATACATTGTATGACAACAAAAGACACAAAA
CGTAAGAAAAATTACTTGAAATGCATTTTTTATTTTTCGTATTCGTAAAA
CAGCCCGGCCGGGCCCCGGATTGGAAATGGGACCAAAGCATAACCAGTAA
GTCACCAGAACACACCAGTTTTGTACTGTATATACAAGCTGCAAAAGATC
CGACCATTTGATCCAGGAAGAATGCCTACTGTTATCGATAGGTGTGGTGG
GTACTTGAGCTGTGGCTTCCTTCAAACAAGTCAACAATCATAACCACAGG
GCCATCATACCACCAAAGTTCTTTAAATGGGATACATTTTGTTGATATAA
TGATGTGTCCATATTGGCCAAAGTGGTCAGTTTGTAAAGTTTTCTTCTTC
ATTGATTTTTTTCAGAATATGGGCCGTCAAGAAGCTACTTCATTGGTACT
TTGTAAGAAGAATCACAAAGAAAGGTACTTAAAAGAGATTGAAGATCAAG
ATATGTTGATATATGTGTTGTGTTTGCTTTATTTGTAGTTGTAACTGTAA
GATGGCAAAAAACATGTAAAAATATAACATCATGTTTGATCTTCGAATTT
TAATTTACAGTGCTTTTCAATAATCCATCAGATGATAGGCACACTACGTC
TTTATGTGAAATGTTTGTTTTTACTGTTGTCTTTTTCTAGAAAGTCAGCT
TGGAGACCTGAGAGAAAAGAAGAAAGGCATTGTAAGTTCCTATTGGTTAA
ATCTGTTACATTCATGAAACTAGAGCAAATCTAGAAAATACTCTTGTATA
CATTGACCCCAAGTCTATGAAACAAATGTACATATTTCAGATTCTATTTC
CTTGTCCTCAACTTTTCCTTGTTATGGTGTGCAGGTTTAGCATTTGTAAG
CACATGTTTATTTTATGTTGTTTTGTATACCCAGTAAACCACCTTTTGGC
ATAACACATCTGTTTTGTACTGTACTAGCTAGTAGGTACAAGCTACGTGG
AACCTCTCATTGGGATGGATCCCTTCTCTTTTTGCAAGTGTGGTGGGATC
TATCTGTATAGCCGGTATAACCGCCCTTCGGCATGACACACCAACTTCGC
AGGCATGCAGCGCGGCAGCAGCTGGTTATATCACACCGAACGACCTGTCA
AGTCTTTAACATGCTCAAGGTGTTGGTCTCCTCAAAAACGGGAATCCTAG
ATTTACGTCCCATCCGAGAGGAAGATCCTAACCAAAGCTACTTTCACCTG
AGTCAAGTGAGGAAATAGGTGTCTTTCTCAAGGGCACAGCATTGGGACCT
GCCTAGGATTTGGCCAAGACCTTTAGATTTATTAGACAACATCCCTTTTG
TTTTCACAAGACCATCTTGCCACCTGCTATGTGAACTTAAGAACTTCAGA
ACAACATAATTTATCTTTCTGCAGCTAGAAGATGTGATGGAACATGAGAC
GTACAAGGCAGCCAAGGAAATTCTGGAGAGATTTGGACCAAGTAAAGAGG
AGGTAAAACGCTTTCTCTCAAATAGCCTGCCATGATACACAAAAATGTGC
TTATGAATATGTAAAACCCTTAAAGTAAGATGCTACACATAGGAATGAAT
GAACAAACGAATGGATGAACGAACGAATGAATGAATAAATAAATGGATGA
ATGGATAAATGAAGAGGTATCTGGGGTGTGGTCTTCCTACCCATAGTCAA
ACATTAGATCACCTGGTTCCAGACTGTATTGATAGAGATGTGCCTTGAGG
TGATTTTTTTCTAGTGCCTGTATTATTTTCCCCAGGCGACTCCTGAGACT
CCACCAGGCAGCCCCAGAAGACAACCCGGGCCCCCCGTCCCCACCCCAGT
ACCTCCTGGGCAAGGTAGGGCAACGCTTTGTCCACATGTATTGTGATCCT
TGTGTATTATGTCTTGGCATTGTATTTGTATCCAGGGAGCCTGAAAAACA
GGTCAAGAGACCTGAGTGTGTCCGCTGGTTAAATAGATAAATGAAATGAA
TGAATGAATTGTAGATATTGTAACAGTGTAGTTCAAGCGCCACTTACTGA
CCAGTCTAACTGGTCCTGACCTTTTAGCCTAGTGGTAAGTGCGTTGGGCG
GTGCGCTGGCTGGCCCGGGTCTGATCCCCGGGAGTCAGGAGACTGTGCTA
CTCGATTCGTCCGTTTCAATATGCATGGTTTCATAATACAGAGCTAAAAC
TTCCAACACAATAAGTAAGACCATCACATTTTGCATGGTCCTATGCAGTC
TTCTTCAGAATCCAATGGATCTATCAAAGGACTTTACTTACAAAATTGTC
TCTAATTGTTTCTTGCATATACCAAGAGAATGCTAATTCTGTAAAGGAAA
AACACAGGTTTGGCATGTTAGGATTTTAAACCCTTGATTGACGTCGACAA
AAATAAATGAATATTTTCACAGCTATCTTAATATTGACCCCAAAAATGGC
AATTTTTATACTATAGCCTGACATTGATCAAAACAGGTGAAACTTTATAG
TATTTCTATACACCCTAGCTGAAAGAAGTGACAAAGCAGACAAACCAGTG
CCCAAATCCCTCAGAAACCACCTACACAGACATAGAGGTATGACATTAGA
TCACAGGTACTACTGGTGACTAACCTGGGAGGTGGTTTCCCTTCTTTTAC
TAAAGATACATTTGTCTAATAAGCTGGACACACTGGTGGCAGTTGTTAGG
CCAGACAAATATGATTTTATGGATGACATCCTCTGGAAACCTAAATCTGA
AAGAACAGCTTTTTTTTGCACTTAAGAGGGTATTCTGTGGCATGTTTTTA
TCTTGATGACTTTTTCATGTGAATTCAGTTTTAGAAAGGATTCACATGGA
GTCAAAAAAGGGCCATATTTTTTGCTAAAAAAAAAAGGCCCAAGTCAACT
CATATGGATGTTATCCATAGAATGGTGCGGCCTATTGCCTCTGCACTTTC
ACTATACCGTAACAACATTTCAGTAAGGGACGGTTTCGCACCAGACTCAC
ACATACTTACAACATGTTGGTTCAGCCACACATCACTATTACCACAAGGT
TCTCTTGGTGGGTAAACCTAAGGAACACCTTTTGCACTGGTGTGGTTGAA
TGTGGTGGTGAATAGATTTAGCTTGGGTGCTGTCTTCCGTAGTAACTGCT
GGCTAAATCTTTTCGCTTGCTAACCGCGGAGTCTGAATTGTGGTTAACAA
ACAAAAACATTGACCCAGTGGTTACTACTGTAACAGAGGATGGCACCCAG
GCTATGGGTTTAGCACTCTTACTCATACACTTGCAGTTACGTGTTCCGAA
ACGGCATCCAGTGATACCGTATTTGTCTTTCTTGCAGAGTTGCGCCAGCG
GCGAACGCCGGCGCCGCCACCTGCCCAGCCCAACATCCCCCGCTTGGCGG
TGGCCCCTACGAGAGTGGAGACTCCACCCCAGGGTACCCCTGCACTCCCC
CGACCCCCTGGGCACCT Coding sequence (CDS) from alignment at Sc0000000:2481178..2487894+ >BlTCONS00000331 ID=BlTCONS00000331|Name=BlTCONS00000331|organism=Branchiostoma lanceolatum|type=CDS|length=711bp|location=Sequence derived from alignment at Sc0000000:2481178..2487894+ (Branchiostoma lanceolatum)
ATGGGAGCGGTTATTACACGCTTCAAAAAAAAGCAAACTACAGTAGAAGT
GCTTGAAGGGCTAGATAAGGAAATCCAGAGCTTAGAGCAGTTCAAACGTC
ACAATGAGGAGTTGCAGAGACGTTACGTGGGCGGGCTGCTGATCTACTCC
ATCGTGTTGTACATCGCTGCTGCCGTCATGTTCTACTTCCTGTTCTTCCC
CGAGGGCTGGCAGGAACGCGTCGTCCGATCACTACCTCTGCTCACCTTCC
CACTGCTAATATGGGCCGTCAAGAAGCTACTTCATTGGTACTTTGTAAGA
AGAATCACAAAGAAAGAAAGTCAGCTTGGAGACCTGAGAGAAAAGAAGAA
AGGCATTCTAGAAGATGTGATGGAACATGAGACGTACAAGGCAGCCAAGG
AAATTCTGGAGAGATTTGGACCAAGTAAAGAGGAGGCGACTCCTGAGACT
CCACCAGGCAGCCCCAGAAGACAACCCGGGCCCCCCGTCCCCACCCCAGT
ACCTCCTGGGCAAGCTGAAAGAAGTGACAAAGCAGACAAACCAGTGCCCA
AATCCCTCAGAAACCACCTACACAGACATAGAGAGTTGCGCCAGCGGCGA
ACGCCGGCGCCGCCACCTGCCCAGCCCAACATCCCCCGCTTGGCGGTGGC
CCCTACGAGAGTGGAGACTCCACCCCAGGGTACCCCTGCACTCCCCCGAC
CCCCTGGGCAC
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000331-exon-Sc0000000-1564993656:2481178..2481317 | BlTCONS00000331-exon-Sc0000000-1564993656:2481178..2481317 | Branchiostoma lanceolatum | exon |
| BlTCONS00000331-exon-Sc0000000-1564993656:2481838..2481879 | BlTCONS00000331-exon-Sc0000000-1564993656:2481838..2481879 | Branchiostoma lanceolatum | exon |
| BlTCONS00000331-exon-Sc0000000-1564993656:2484142..2484329 | BlTCONS00000331-exon-Sc0000000-1564993656:2484142..2484329 | Branchiostoma lanceolatum | exon |
| BlTCONS00000331-exon-Sc0000000-1564993656:2484843..2484901 | BlTCONS00000331-exon-Sc0000000-1564993656:2484843..2484901 | Branchiostoma lanceolatum | exon |
| BlTCONS00000331-exon-Sc0000000-1564993656:2485118..2485158 | BlTCONS00000331-exon-Sc0000000-1564993656:2485118..2485158 | Branchiostoma lanceolatum | exon |
| BlTCONS00000331-exon-Sc0000000-1564993656:2485852..2485929 | BlTCONS00000331-exon-Sc0000000-1564993656:2485852..2485929 | Branchiostoma lanceolatum | exon |
| BlTCONS00000331-exon-Sc0000000-1564993656:2486213..2486291 | BlTCONS00000331-exon-Sc0000000-1564993656:2486213..2486291 | Branchiostoma lanceolatum | exon |
| BlTCONS00000331-exon-Sc0000000-1564993656:2486946..2487014 | BlTCONS00000331-exon-Sc0000000-1564993656:2486946..2487014 | Branchiostoma lanceolatum | exon |
| BlTCONS00000331-exon-Sc0000000-1564993656:2487765..2487894 | BlTCONS00000331-exon-Sc0000000-1564993656:2487765..2487894 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:2481178..2487894 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000185 |
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