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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:2481169..2487894+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000328 ID=BlTCONS00000328|Name=BlTCONS00000328|organism=Branchiostoma lanceolatum|type=mRNA|length=6726bp|location=Sequence derived from alignment at Sc0000000:2481169..2487894+ (Branchiostoma lanceolatum)
CCAATCTCCAGAAAATGGCGGACGAACTGAAACGGTAGTAGCGTCTCTGC
TAACATTTCACGCTTTTCCGGACATATTTCGTCCCATTTCGTGCTAAAAC
TTGCCTGTACAGAAACGACAAGATGGGAGCGGTTATTACACGCTTCAAAG
TAAGTCCAGACCTTTTNGTCTCTGCTAACATTTCACGCTTTTCCGGACAT
ATTTCGTCCCATTTCGTGCTAAAACTTGCCTGTACAGAAACGACAAGATG
GGAGCGGTTATAACACGCTTCAAAGTAAGTCCAGACCTTTTTTGTGCGAT
GTCACGGCGCTGACATATTGTCGAGCGGAAGTTTGAATGACTTATGTATG
ATGTTGTTCCCAAAATATTATAATATTTTGCTTTGTCAAATTATACTTAT
AAACAATGCCAGTTTTAAAGACAAAAATTAGAGCTTAAACAATAATTAAA
ATTTGTTTAAAGATTTTTTGTTAACGTTGTATTTTGCGTTAGAGATATNA
TTTTGCGTTAGATATATTCTGTGTTGAAATGTTTTGAAAGCGTTTTGCTT
GTGTAGCAATTTGTGACTCCTATTATAATATTCATAACGTTGACGTCAGC
AAAAAAGTAGATGAAAATTCATGTGTTGAACTGTATATTCCATGATCCTG
TTTTTTTTTTCTTCCATAGAAAAAGCAAACTACAGTAGAAGTGCTTGAAG
GGCTAGATAAGGTATGTATCATAAGACAAGACAAGACAAGACTATAACTA
ACGTTAGTATAACTATAAGTATAGTCTATTTTCATAAATTGTCAACATCA
ATATTGTCGTATTAACAAGAACATGTCAAAAACTGCTTGATAGTATTGTA
ACATAATCCATTTGTGGCAGTATGCTAGCCAGTACATTTGCCAGTTGATG
TCATACAAAATATATTCAAGTTGCCATCATTTGATTTCTTTGTAAAATTC
AATGTCAGACAGTTTTGGTGTTTCCATTTTTGTGTGTCATGTCATGCAAT
TATGATGGTCATGATGTCATTCAAAAGGTATTTTTGGTGATTTGGGTAAA
AAAACTGATTTGGGAAAATATTGGTCATGCAAGGAGACGTGTTGATTTTT
GCATATTCTAAGTAAGGTAAAAGAATATTTTATTATATGTTGACGAGCAG
CCAAATTATGAAAAATCATGTTAAATTGTTTTATTTTTTCCTCACAAAAA
GAGATGGCAGAGAAAAGATTTTTGTAGCAACAATTTAACCATTGGATTCA
GTGGGCATGTCTTGACCTAAATTCCTTGTGGGAAGTTTAGAAAGGAATTT
AGGTCAAGACATGCCGACTGCATCTATACTTAGCGGGCCTAAGTAAAACC
TTGTTCTATCTATGTCATGTAGGCCAGAGCTGTAGACAGTGACTCTAACT
GTAAATGTTTGCAGTGGTATTATTTTTGCATTAAGGTCTCCACTGCGAAT
ATGCCTTCCCGATGTATAGATACTGAACTACTTTCCAACTGCAAACTTAG
AACAGTGTGAAAATCTCTTTTCACTTTATACTGCAAAGTTATACATTAAG
TCCCCACAAAAATAAAATCAATCTACAATTGTTGGGACTCAGATCTAGAC
TGCTGTGAAATCAACTTGTAATGTTGAAATTTTCGCTGTGGCTTAATGTT
TGCTGGTTCCAATTAGTTGGTAACTGGGAGACCCCCGGTACAACCCTGGG
TCAGGACATCTCAGTTGGAGCTGCACTCGTCTTCCAAAAGGGACGTAAAA
TGGGGGACCCATGTTCAAGTAGGCACCTTGAAAATTTTGAAGGGGAAGGA
CTACTAGTAGCAATTCCTACATGTAAAGATATATCCCTTCGACAGAAACA
GTAAGGAAACTTGCTGCCATAGATACCACTAGGTACTACTGGGTGAACAA
TGACAACAACACAAAACCATTTCTTCCTGCATATTTTGAATACCAGACAG
GTAATTTGACAGTAGACAGGATCAAGTGTCTAGAACAGTGATAACCTTTC
ACACCCTAAACGTGATTAAATGGAAACTATGCTCATGTGCTTTTATCCAT
AAATCTGTAGGCATTGGAGAAATGTGTTTTTTCCTGTTAGTGTTACTGAG
AGGTTATGTCAACATAGCATTCGATCCCTCTGTTATTGAAATACGCTAAT
TATAGAATGATGGGATGGGTTGACATGGGGTGAATCAAGGACAGTGGTGT
TCAATTCAATTGATTAGCAATATCATGTAAAACTTAAGCCACTAGCTATA
TAGCTGACTTGATATGTGCTTTATTTTATTTGCTTTTAACTTTAGAACTG
ACAGAAATTGAATCCGTTTCTTTCTTTAATGTATTTAAAATAAATGAAGG
AGGACAATATAACAAGAAAAATGTTACCACGAAATTGTTCACAATGCCAT
TGATTATACATAAATGCTTGTTTACAGTTATGCACTTTTTTCTTAAAGTG
GACAAAACCTGAAAGGTGGTGCACCTAACCTGAAGATTTAGATGCACAGA
AAAAATGTGGTTGTACAACATAAAATAAAGTAGAATGTCAGCAAAACATA
ATTACAAGCTTAAAGTTACTGCCTCTCTCCAGAGCTGGAATCTTCAATTC
TATATAAAAGCTAACTTCAAATTCTAAACATGTACAGCAAAGGTTTTACT
ACTTTTTCTTGATACTTGTACAATTAGTCAATACCTAACCCTACAAAAAA
TGTTTAGGTGAACCAGGGCACCCACAGTCAAAAATAAGGTACATAGCTTT
AATTTTTGGTGCACACAAGTGCATATGCACCCAGTATTTCAAACCCTGGA
AGCATTAGAAAAGATATGAATTTTTGATCGTGCAGTATTTTTTTCCAGGA
AATCCAGAGCTTGATATTAGAGCAGTTCAAACAAGGTGCAATTTTGGTGG
GTGCATATGCTCTCAGTATTTTGAGCCCTTGACGTTTGAAAAAAGTTTTG
ATCGTGCAATATTGTTGTTTCAGGAAATCCAGAGCTTAGAGCAGTTCAAA
CGTCACAATGAGGAGTTGCAGAGACGTTACGTGGGCGGGCTGCTGATCTA
CTCCATCGTGTTGTACATCGCTGCTGCCGTCATGTTCTACTTCCTGTTCT
TCCCCGAGGGCTGGCAGGAACGCGTCGTCCGATCACTACCTCTGCTCACC
TTCCCACTGCTGTGAGCACTTGTTTGGTTGCTTGTTTGTTTTTTTTGTTT
TTTTTGTTGGTTCGCCTAATGCTTTGGTCCCATTTCCAAAGCGGGGCCCG
GCCCGCAGCTTGTGGGAATGAAAAATGTGATACATTGTATGACAACAAAA
GACACAAAACGTAAGAAAAATTACTTGAAATGCATTTTTTATTTTTCGTA
TTCGTAAAACAGCCCGGCCGGGCCCCGGATTGGAAATGGGACCAAAGCAT
AACCAGTAAGTCACCAGAACACACCAGTTTTGTACTGTATATACAAGCTG
CAAAAGATCCGACCATTTGATCCAGGAAGAATGCCTACTGTTATCGATAG
GTGTGGTGGGTACTTGAGCTGTGGCTTCCTTCAAACAAGTCAACAATCAT
AACCACAGGGCCATCATACCACCAAAGTTCTTTAAATGGGATACATTTTG
TTGATATAATGATGTGTCCATATTGGCCAAAGTGGTCAGTTTGTAAAGTT
TTCTTCTTCATTGATTTTTTTCAGAATATGGGCCGTCAAGAAGCTACTTC
ATTGGTACTTTGTAAGAAGAATCACAAAGAAAGGTACTTAAAAGAGATTG
AAGATCAAGATATGTTGATATATGTGTTGTGTTTGCTTTATTTGTAGTTG
TAACTGTAAGATGGCAAAAAACATGTAAAAATATAACATCATGTTTGATC
TTCGAATTTTAATTTACAGTGCTTTTCAATAATCCATCAGATGATAGGCA
CACTACGTCTTTATGTGAAATGTTTGTTTTTACTGTTGTCTTTTTCTAGA
AAGTCAGCTTGGAGACCTGAGAGAAAAGAAGAAAGGCATTGTAAGTTCCT
ATTGGTTAAATCTGTTACATTCATGAAACTAGAGCAAATCTAGAAAATAC
TCTTGTATACATTGACCCCAAGTCTATGAAACAAATGTACATATTTCAGA
TTCTATTTCCTTGTCCTCAACTTTTCCTTGTTATGGTGTGCAGGTTTAGC
ATTTGTAAGCACATGTTTATTTTATGTTGTTTTGTATACCCAGTAAACCA
CCTTTTGGCATAACACATCTGTTTTGTACTGTACTAGCTAGTAGGTACAA
GCTACGTGGAACCTCTCATTGGGATGGATCCCTTCTCTTTTTGCAAGTGT
GGTGGGATCTATCTGTATAGCCGGTATAACCGCCCTTCGGCATGACACAC
CAACTTCGCAGGCATGCAGCGCGGCAGCAGCTGGTTATATCACACCGAAC
GACCTGTCAAGTCTTTAACATGCTCAAGGTGTTGGTCTCCTCAAAAACGG
GAATCCTAGATTTACGTCCCATCCGAGAGGAAGATCCTAACCAAAGCTAC
TTTCACCTGAGTCAAGTGAGGAAATAGGTGTCTTTCTCAAGGGCACAGCA
TTGGGACCTGCCTAGGATTTGGCCAAGACCTTTAGATTTATTAGACAACA
TCCCTTTTGTTTTCACAAGACCATCTTGCCACCTGCTATGTGAACTTAAG
AACTTCAGAACAACATAATTTATCTTTCTGCAGCTAGAAGATGTGATGGA
ACATGAGACGTACAAGGCAGCCAAGGAAATTCTGGAGAGATTTGGACCAA
GTAAAGAGGAGGTAAAACGCTTTCTCTCAAATAGCCTGCCATGATACACA
AAAATGTGCTTATGAATATGTAAAACCCTTAAAGTAAGATGCTACACATA
GGAATGAATGAACAAACGAATGGATGAACGAACGAATGAATGAATAAATA
AATGGATGAATGGATAAATGAAGAGGTATCTGGGGTGTGGTCTTCCTACC
CATAGTCAAACATTAGATCACCTGGTTCCAGACTGTATTGATAGAGATGT
GCCTTGAGGTGATTTTTTTCTAGTGCCTGTATTATTTTCCCCAGGCGACT
CCTGAGACTCCACCAGGCAGCCCCAGAAGACAACCCGGGCCCCCCGTCCC
CACCCCAGTACCTCCTGGGCAAGGTAGGGCAACGCTTTGTCCACATGTAT
TGTGATCCTTGTGTATTATGTCTTGGCATTGTATTTGTATCCAGGGAGCC
TGAAAAACAGGTCAAGAGACCTGAGTGTGTCCGCTGGTTAAATAGATAAA
TGAAATGAATGAATGAATTGTAGATATTGTAACAGTGTAGTTCAAGCGCC
ACTTACTGACCAGTCTAACTGGTCCTGACCTTTTAGCCTAGTGGTAAGTG
CGTTGGGCGGTGCGCTGGCTGGCCCGGGTCTGATCCCCGGGAGTCAGGAG
ACTGTGCTACTCGATTCGTCCGTTTCAATATGCATGGTTTCATAATACAG
AGCTAAAACTTCCAACACAATAAGTAAGACCATCACATTTTGCATGGTCC
TATGCAGTCTTCTTCAGAATCCAATGGATCTATCAAAGGACTTTACTTAC
AAAATTGTCTCTAATTGTTTCTTGCATATACCAAGAGAATGCTAATTCTG
TAAAGGAAAAACACAGGTTTGGCATGTTAGGATTTTAAACCCTTGATTGA
CGTCGACAAAAATAAATGAATATTTTCACAGCTATCTTAATATTGACCCC
AAAAATGGCAATTTTTATACTATAGCCTGACATTGATCAAAACAGGTGAA
ACTTTATAGTATTTCTATACACCCTAGCTGAAAGAAGTGACAAAGCAGAC
AAACCAGTGCCCAAATCCCTCAGAAACCACCTACACAGACATAGAGGTAT
GACATTAGATCACAGGTACTACTGGTGACTAACCTGGGAGGTGGTTTCCC
TTCTTTTACTAAAGATACATTTGTCTAATAAGCTGGACACACTGGTGGCA
GTTGTTAGGCCAGACAAATATGATTTTATGGATGACATCCTCTGGAAACC
TAAATCTGAAAGAACAGCTTTTTTTTGCACTTAAGAGGGTATTCTGTGGC
ATGTTTTTATCTTGATGACTTTTTCATGTGAATTCAGTTTTAGAAAGGAT
TCACATGGAGTCAAAAAAGGGCCATATTTTTTGCTAAAAAAAAAAGGCCC
AAGTCAACTCATATGGATGTTATCCATAGAATGGTGCGGCCTATTGCCTC
TGCACTTTCACTATACCGTAACAACATTTCAGTAAGGGACGGTTTCGCAC
CAGACTCACACATACTTACAACATGTTGGTTCAGCCACACATCACTATTA
CCACAAGGTTCTCTTGGTGGGTAAACCTAAGGAACACCTTTTGCACTGGT
GTGGTTGAATGTGGTGGTGAATAGATTTAGCTTGGGTGCTGTCTTCCGTA
GTAACTGCTGGCTAAATCTTTTCGCTTGCTAACCGCGGAGTCTGAATTGT
GGTTAACAAACAAAAACATTGACCCAGTGGTTACTACTGTAACAGAGGAT
GGCACCCAGGCTATGGGTTTAGCACTCTTACTCATACACTTGCAGTTACG
TGTTCCGAAACGGCATCCAGTGATACCGTATTTGTCTTTCTTGCAGAGTT
GCGCCAGCGGCGAACGCCGGCGCCGCCACCTGCCCAGCCCAACATCCCCC
GCTTGGCGGTGGCCCCTACGAGAGTGGAGACTCCACCCCAGGGTACCCCT
GCACTCCCCCGACCCCCTGGGCACCT Coding sequence (CDS) from alignment at Sc0000000:2481169..2487894+ >BlTCONS00000328 ID=BlTCONS00000328|Name=BlTCONS00000328|organism=Branchiostoma lanceolatum|type=CDS|length=711bp|location=Sequence derived from alignment at Sc0000000:2481169..2487894+ (Branchiostoma lanceolatum)
ATGGGAGCGGTTATAACACGCTTCAAAAAAAAGCAAACTACAGTAGAAGT
GCTTGAAGGGCTAGATAAGGAAATCCAGAGCTTAGAGCAGTTCAAACGTC
ACAATGAGGAGTTGCAGAGACGTTACGTGGGCGGGCTGCTGATCTACTCC
ATCGTGTTGTACATCGCTGCTGCCGTCATGTTCTACTTCCTGTTCTTCCC
CGAGGGCTGGCAGGAACGCGTCGTCCGATCACTACCTCTGCTCACCTTCC
CACTGCTAATATGGGCCGTCAAGAAGCTACTTCATTGGTACTTTGTAAGA
AGAATCACAAAGAAAGAAAGTCAGCTTGGAGACCTGAGAGAAAAGAAGAA
AGGCATTCTAGAAGATGTGATGGAACATGAGACGTACAAGGCAGCCAAGG
AAATTCTGGAGAGATTTGGACCAAGTAAAGAGGAGGCGACTCCTGAGACT
CCACCAGGCAGCCCCAGAAGACAACCCGGGCCCCCCGTCCCCACCCCAGT
ACCTCCTGGGCAAGCTGAAAGAAGTGACAAAGCAGACAAACCAGTGCCCA
AATCCCTCAGAAACCACCTACACAGACATAGAGAGTTGCGCCAGCGGCGA
ACGCCGGCGCCGCCACCTGCCCAGCCCAACATCCCCCGCTTGGCGGTGGC
CCCTACGAGAGTGGAGACTCCACCCCAGGGTACCCCTGCACTCCCCCGAC
CCCCTGGGCAC
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000328-exon-Sc0000000-1564993656:2481169..2481222 | BlTCONS00000328-exon-Sc0000000-1564993656:2481169..2481222 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2481348..2481442 | BlTCONS00000328-exon-Sc0000000-1564993656:2481348..2481442 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2481838..2481879 | BlTCONS00000328-exon-Sc0000000-1564993656:2481838..2481879 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2484142..2484329 | BlTCONS00000328-exon-Sc0000000-1564993656:2484142..2484329 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2484843..2484901 | BlTCONS00000328-exon-Sc0000000-1564993656:2484843..2484901 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2485118..2485158 | BlTCONS00000328-exon-Sc0000000-1564993656:2485118..2485158 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2485852..2485929 | BlTCONS00000328-exon-Sc0000000-1564993656:2485852..2485929 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2486213..2486291 | BlTCONS00000328-exon-Sc0000000-1564993656:2486213..2486291 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2486946..2487014 | BlTCONS00000328-exon-Sc0000000-1564993656:2486946..2487014 | Branchiostoma lanceolatum | exon |
| BlTCONS00000328-exon-Sc0000000-1564993656:2487765..2487894 | BlTCONS00000328-exon-Sc0000000-1564993656:2487765..2487894 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:2481169..2487894 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000185 |
|
