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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1639110..1645635+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000260 ID=BlTCONS00000260|Name=BlTCONS00000260|organism=Branchiostoma lanceolatum|type=mRNA|length=6526bp|location=Sequence derived from alignment at Sc0000000:1639110..1645635+ (Branchiostoma lanceolatum)
GTGAGGTAGGTAATAGAATTATACAATTTTACCCGAATTTTCACAAAAAG
AGGCACGTAATGGACTTGATTTTACGATGTCTGCTTTTTCGATGACCGTT
TTATCTATTCAAAGAGTTTTATGTGAATGCTACGCGAATTTGGCAGCGTT
TTGTTGATAAAACTGTACTCTACTCTGTAGGGGGAGGGGGGTGCAAAATC
GTCAATGTTTTTGTTTTGATGCGCAAATGGTATATAATTTGCATCAATGA
CATTGCCTTTATATTTTGTATACAGGTGTTTGTGTTGTTGGTGCTGTCTT
TAGATTTAAGTATTCCAGTTTGACCTGTAAATTGTCAGGTTACATTTCAT
TTATAGTACGAGTCACATGTCATGTGTTAATGCATATTTTTTAATGTCAA
TATTTTCATGTTTTTGCCAAGGCAAATTTGTCGATAAGAGAAATTTATAT
CGTAATTTAAGTGAGTATAGGAAAGAGTCATGTATAAAATGACAATTTGG
CAAGAGAAAATTTTGATGTTTTTGTTTAGAGTCTAAGACTAGCAAGAAAA
CTATTTGACCTTTAAATAATGTTATTTAAAGTGTCAATGAAATCGAGATC
AAAACCTCCTCGATCAAATCTACAAATCTATGTTCACTCTGCAAAAAGCA
GGGTGTAAAGTAGTGCTGTCTCCAGGACCTGTCCTTCCGTCCCATGACGG
AAATTTGCTTGTTGGGACAGAACAAAATTAAACCCTGTCTGTCCAAAAAT
ATCAATTTCATGACCTAAAACTGATGAAAATGTATTTTTGTAAGCTTAGA
ATGACATATTCAACATTGAAAATCAAAAACATGGGCTCATTGAGTGGGAC
GGAAAAAAATGTAAACCTGGAGACAGCCCTGGTGTAAAGTGATGTAATTT
TTTTGTAAAACATACAACAGTCCTTGTGTAGTACACACACTTTGCACATA
GTTGACGAAGTGGTTTGCATAGGTGACAGAGTCATTTGCGTAGATGGCAA
AATCGGGAAACGGGCCACTGTAGTTATTTATAGAATCTCAAAGGCTGTAA
GGTATGCTCTGATTGGTTGCATTCCTCAGTTTCTGATTCGTTCCTAAAAA
TTCCAAAAGTTCAAGAAAAAGTCTTATAGACAGGAACATCCTCAATATTG
AAAACATCATCCTGTCAATAGTGCAGAAAATTCTCATTGACAGGATCTAG
GAACATCCTGTCAATAGCCTTGGACATAGACTTACATGATACCTGAGTGA
CAAGAAAAGACAGAGTTTCTATTCAGCGAACAGGCACCCCCGGACGAACA
ACATTTAGTTACTGTACTAAAACAACAGTAGCTAATTGAACTATTAGCAT
AAACCTTGTCTTGAATTAACCTTCTTTTGAAGACTAGTCGTCAAGACATC
CTAAATTGTTTTAACCTCATTAACATATCTATTCAGAGTTTTGGTATAAA
TCTGGTTTTCCAGTCCTTATCGTGAAATGTCTGACTGTTTCAAAATTTTA
TCCAGTTGCTTGAATAACTATTTTTGGCGTTCTACTTAGCGAATTTTACG
TTTCTGATTGATGTACAATTCCAACCTAGGTTTTAACCCAGGTTGTCCAA
CCTGGTTCAAAAAAGTATTTTGCACACTTCTAGAGGTGGCAAGGTGGCCT
ACGTCTAGAAGTGGTCATTGACTTAGAATTGAAAGTTTCTGGGTGGGAAT
CCCTAGCAGGCCCCAATGTTGTTGGCCCCAACCTTCCTGACCACATAGAT
TTCATAATTAAGGGAACTTTATTTTCACACTCGCATCAGTTTTTGGGTTT
TCAGAGGATGTCATCCATATATTCTTTTATACATTTGTACATGGCCTTAC
CTGCAAAGCTAGCGAGAACTCAGTACTGCAGTGCAACCATGCCCCCTTGA
GACAATGTGTAGCATTGCATCTCAATACTGAACTTACTGAAGCATTGCTT
TGAAACTGATATAACAACTTTTTACAGCGTCTATTTTCCCGGCTGACCTA
TGATCACAACTGTAGTAGGATTTTATGTTCGCAAGGAAGATATGTGTTAT
GTTAGATATTCGAAATGTGGCCTTGTAGACATCAAACAACATTACTCAAA
GGTGTAAAATATCTCAAATGTAAAGAGCTGAGAAAGTTTTCTTCTTCTTT
TTTTCCAGATCAAAGAAATTTCGGTGTCCCCGCTGGTGTTTTAAAGATGT
CAGAGCAAGATGGCTTCCCCTCGAAGCGACCGCGACTTGACAGAGATCAG
GCTCTGATTACAAACAACAACAGCGAACCAGAAAACCGATTAACCAGTGA
GGTAGTCATGGCCGGTTGTTCCAACTCTCTGGAAGTGTGTCAACAAAGCC
GTTCTGTACCAAGAAACTGTGCTGTAGAGACAGAGGCACCCATTGGTCAC
CCTGTGCCAACATTATCCAATCAGGGTGATGCTGCCAAATCACCCACCAA
TCAGAGACCGAGAACAGAGTTGGGTATGGCAGAAGGGGATGCAATACCAC
ATGTTGATCACCAAAAAAGTACTGTCAAAAACACCAACTCTACTTCCCCT
TCCTTAAGTAGAGATGATACTGAAGGGACCAATGAACACACTCCGACCCA
GTCTTCAACAGCCAATGAAATGACAGACTCAAACAAAGCAGCCAATCAGA
AGTCAGAACAGTCAGCCAATGAAACTGCAGCATCACCTGTTGCAGAAGTT
GTCCCAGTGGACAGGTCCGTCGCAATGAAGTTCCTACAGATTGAGGCAAA
CTTGTGCGAGACGTTGAGAGACCTTGTGTTTCGGGATCCGGTGACGCATT
TGTACAATCCTCTGGACTACGCACGGGAGACGCACAAGGACTATGTCATG
AAGTACTGCTGTTCTCGCAAAGATGTGCTGTTCTTAGGGATGAACCCTGG
GCCTTTTGGAATGGCACAGAACGGGGTAAGTGTGGGTAGGCATGGTATAA
GCTAGCCTGGGTGCCAGACCACCGCGCTCCTGGCGCTAATCTCGCGCCGC
CGCCACAGATAGCACACGGCCCACTAATTAGCTCTTGCGTGGTAGAAATC
AGAGTTCGGCTGCCAAGCGCTCCCGGGTGACAACTCTCTCCCTACTACCA
GGTCTTCCCCGCCCAAAAGGGGTTATCATCGCATCGTGCGAAAGGTCTGG
TATCCAGGCTAGGTATAATGGTATACGGGTAAGTATACGTAGGCATGTTA
CAGATACACAGAGTTTGTCATTGGTATCGTTACAGAAAATCCAGGTCTGG
TCCAGGTCCAGGCCTATACCTGATAATAGTAATACAGTGTCATATCTTGA
GAGCGAGGCATTAGTGTTAGTCACTGTGAGTGTTTCAAAGTATGTTCAAA
TTGTTTATTGGAATATTATAGTTATTTCCAGTGCACATTAGTACTGGCGG
TTTAAAGAGCAACCTCAAAATGATAGCCTGAGTGTCATCCTGTTTCAGTT
CCAGGCTCTGCATGAAGGCAATATACTGTAAATGCAGAAATGTTCGCGGT
GGTTTTATGATCACGGTTTTCGCGGCAACTGTTTCACTGCAAACTTAAAA
CTACCGCAAACATTTTTGTCCAATACTGTGGCAGTATGTGACTATAGTGC
TGCTGCGAACTTAAAACCACCGCGAACACTCCATTTTCCCCTTAGCGCGA
ATGTAACAGTAACCTAGTCTGTATAACGCAAACTCCAGCTGTCCGGGGGT
TCCTCTCCCCTCCCCGCGGGTGGATAGCCGTTACAGGCGGCGAGCGGACA
CGGGGCTTGGTTGAAACCAGGCTAACAGTAACCAGTATGTGATCATTTCC
AGGTTCCTTTCGGTGACACCACCTTTGTGAAGGAATTCTTGAAGATCAGC
GGAAAAGTGAATCCGCCGGCCCTCCAGCACCCAAAACGTCCAATCACAGG
CCTGGACTGCACACACAGCGAGGTGAGCGGGACACGTTTCTGGGGGCTTT
TCAGCACGCTCTGCGAAACACCAGAGAACTTCTTCCGTCGCTGTTTTGTT
CACAACTACTGCCCGCTCGTCTTCATGACCAAAACCGGGAAGAACGTGAC
CCCGCCGAGTTTACACGTGACGCAGCGGGAGCCGTTACTAAGCGCATGCG
ACACCGCTCTTGTGGAGGTCATCCGCTTGCTCCAGGTGAAAACGGTCGTT
GGCGTGGGGAGGTTCGCCCAGGAGCGAGCCCAGTACGCGCTGAAAACGGC
GGGGTTGGATATTCCAGTTTTGTTCATTATGCATCCGAGCCCCATCAACC
CACAGGCAAATAAAGGCTGGGCTGCACAGATGATGGTAGAGTTTGAGAAG
TTAGGCATCATGAGGTACCTGGTACCGCAGCCTACAGGTTAGGCAGATAG
GCAGCCACTACATGAGGTTCATACTTCATACTTCGCACAGATGATGGTAG
AGTTTGAGAAGTTAGGCATTATGAGGTACCTAGTACCAAAGGCTACAGGT
TAGGCAGATAGCCAGCCACTACACAAGCTTCATACTTCAGGTCTCATTCA
TTTTTTGGCCCATAGGCTTACATGTTATGATACGTGTTTTACATGGGCAC
GTTCGTAATGAAGGTATAGGAAATATGCCAATGTTATTCATTTCATGTTG
AAAACATTTACCGTTGATCATGTAAAAAAAATGGCCAACAGTTTTTCTAC
ATACAATCTCTTTTTATACCAGTTCCAAACTGCACCTAGCTACACCCCCA
AAAAAGGCACTTTACAGCTGTAAGCGCATGACCGCATCACCTACAATGCC
GGGCTGTGCACGGCTGCCGAACTTTACCTGCTAATTTCTTCAGGTACAAA
CAAGCTTTCATCAGTTTGACGGTTGAGATCAGTTGGGCTGGCTAAAAGGG
TATTTCCCACCGATATAAACACACGTTCATGCAGCCGTTAATTTTTTGGG
GTACGGACTCTTTGAGACTGCACCCTCGGAGTAACACATGAATGAGACCT
TCATACTTGGCACAAATGATGGTAGAGTTTGACTTTGAGGAGTTAGGCAT
TATAAGGTACCTAGTACTGCAGTCTACAGGTTAGGCAGATAGGCAACCAC
TACACGAGCTTCATACTTGTTAGGCAGGAAGGTGATGATAATGTTGGGAA
TTCTTTCAGGATGAAAAAAAGAAATTGAAGGTATCAAATTTATAGAGATT
AAGCCAAGTTTGGCTTGTACTTATGATATGCTAGCAATGATTATTTTACA
TACATACATGATTATCTTAGTTTTTGTAATAAGGTTTTGTTATATGTTCA
TTTTTTTACTCTATATATCTTTTTATAGTAGAGACATACTGTATGATTAT
AAGTCCTGCTGATGTCGTTATTGCATATTTTGACATTTAGATTATCATTG
ACAAAATGCGTTGTTTTTTCATGTATAGCTTCTTGAAAATTCCTAGTGTA
AGACTTCTGAACTTCATTTAGTCATTGTGACTTGAGTTACAAAAAGGTTA
AATTACCTACAAATAGAGAGAGAGATCTCTTTTTTTAAAAACCTGTTTGA
CTCAAATGTTTGTATTCTTGCACTAGAAATAGTAGAATTATAAAAGAGCA
AAGTTTTCTCTTGAATGAAGCTTGAAAAATAGGTCCCAACCCTCATCATA
ATCATCATCATCGGTATGACAAGGTTAACTCTGTATTATTTTAGTTCCAG
ACTGTCCTTACAAACATGGCCATGACCTTGACCCCTGTGGTGACCTCTGA
CCTCCCCATGTCAGAGAGAATCTAGGAGGGGATATGTCTCAGCTGTATGG
ACTGTCTTGTCTTTTAGTTAGGCAAGGACAACACTTCACCGTCCAAGGCT
AGACTAGTTAGTCGCTTTCCTTCCATACCAATGATTCAACATGCTAGACC
AGGACTCCAAAACAGAACTGTTCAAAAAGGCAAGGAGCTCGTAAAATTGT
GTTTCAGATGTTAACTTTGTCATTAATGACTTAATTGGTTGGTTGGTTGG
TTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTT
GGTTGGTTGGTTGGGAAAATCTTTGTTTGCGTTCCCACTGTGGAAATTAG
TTGAATTTCGGTTACAAAATGTCAGATGATTCCTGTATTGCATCACTAAG
ATCTATCTGAAAAATATGCGTAATGTCATAGTATGTTGAAAACTCTACCG
CACTGTTGATGAGACTACTTAAGAAAACTGTTCATTAACTGCAAAGGTAT
AAAGAGTTAGTATTTTATTATTTCATTTGAAGGTTTAGCTGAAGTATATT
TTGATTATTTTTTGTCATAAAGGGTACTTATTAGAAAATCCAGTAGTCAA
TTTGAGTACCTTAAAAACTCAAAATTAACTGTTTTGCTATCTATTTTTGC
CATGAAAAGAACCAAACTTAGCTTCATACTTAATTGAAATATATTCAATA
TTTTCGCTTAAACTACATAACTCAATATGTATGAAAAAATTGACCTAAAA
GTGTTGTTATCAAATTGTTACTGTTGTAAATGTTGCGTAATAAAGCATTG
TATGATTCCATCTTGTTTTTGCTTTT Coding sequence (CDS) from alignment at Sc0000000:1639110..1645635+ >BlTCONS00000260 ID=BlTCONS00000260|Name=BlTCONS00000260|organism=Branchiostoma lanceolatum|type=CDS|length=1269bp|location=Sequence derived from alignment at Sc0000000:1639110..1645635+ (Branchiostoma lanceolatum)
ATGTCAGAGCAAGATGGCTTCCCCTCGAAGCGACCGCGACTTGACAGAGA
TCAGGCTCTGATTACAAACAACAACAGCGAACCAGAAAACCGATTAACCA
GTGAGGTAGTCATGGCCGGTTGTTCCAACTCTCTGGAAGTGTGTCAACAA
AGCCGTTCTGTACCAAGAAACTGTGCTGTAGAGACAGAGGCACCCATTGG
TCACCCTGTGCCAACATTATCCAATCAGGGTGATGCTGCCAAATCACCCA
CCAATCAGAGACCGAGAACAGAGTTGGGTATGGCAGAAGGGGATGCAATA
CCACATGTTGATCACCAAAAAAGTACTGTCAAAAACACCAACTCTACTTC
CCCTTCCTTAAGTAGAGATGATACTGAAGGGACCAATGAACACACTCCGA
CCCAGTCTTCAACAGCCAATGAAATGACAGACTCAAACAAAGCAGCCAAT
CAGAAGTCAGAACAGTCAGCCAATGAAACTGCAGCATCACCTGTTGCAGA
AGTTGTCCCAGTGGACAGGTCCGTCGCAATGAAGTTCCTACAGATTGAGG
CAAACTTGTGCGAGACGTTGAGAGACCTTGTGTTTCGGGATCCGGTGACG
CATTTGTACAATCCTCTGGACTACGCACGGGAGACGCACAAGGACTATGT
CATGAAGTACTGCTGTTCTCGCAAAGATGTGCTGTTCTTAGGGATGAACC
CTGGGCCTTTTGGAATGGCACAGAACGGGGTTCCTTTCGGTGACACCACC
TTTGTGAAGGAATTCTTGAAGATCAGCGGAAAAGTGAATCCGCCGGCCCT
CCAGCACCCAAAACGTCCAATCACAGGCCTGGACTGCACACACAGCGAGG
TGAGCGGGACACGTTTCTGGGGGCTTTTCAGCACGCTCTGCGAAACACCA
GAGAACTTCTTCCGTCGCTGTTTTGTTCACAACTACTGCCCGCTCGTCTT
CATGACCAAAACCGGGAAGAACGTGACCCCGCCGAGTTTACACGTGACGC
AGCGGGAGCCGTTACTAAGCGCATGCGACACCGCTCTTGTGGAGGTCATC
CGCTTGCTCCAGGTGAAAACGGTCGTTGGCGTGGGGAGGTTCGCCCAGGA
GCGAGCCCAGTACGCGCTGAAAACGGCGGGGTTGGATATTCCAGTTTTGT
TCATTATGCATCCGAGCCCCATCAACCCACAGGCAAATAAAGGCTGGGCT
GCACAGATGATGGTAGAGTTTGAGAAGTTAGGCATTATGAGGTACCTAGT
ACCAAAGGCTACAGGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000260-exon-Sc0000000-1564993656:1639110..1639114 | BlTCONS00000260-exon-Sc0000000-1564993656:1639110..1639114 | Branchiostoma lanceolatum | exon |
| BlTCONS00000260-exon-Sc0000000-1564993656:1641268..1642034 | BlTCONS00000260-exon-Sc0000000-1564993656:1641268..1642034 | Branchiostoma lanceolatum | exon |
| BlTCONS00000260-exon-Sc0000000-1564993656:1642912..1643413 | BlTCONS00000260-exon-Sc0000000-1564993656:1642912..1643413 | Branchiostoma lanceolatum | exon |
| BlTCONS00000260-exon-Sc0000000-1564993656:1643525..1645635 | BlTCONS00000260-exon-Sc0000000-1564993656:1643525..1645635 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1639110..1645635 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000134 |
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