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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1639073..1645635+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000258 ID=BlTCONS00000258|Name=BlTCONS00000258|organism=Branchiostoma lanceolatum|type=mRNA|length=6563bp|location=Sequence derived from alignment at Sc0000000:1639073..1645635+ (Branchiostoma lanceolatum)
CAGAAAGCAGGCTATCTCCACAAGGTGGGAGGGTACAGTGAGGTAGGTAA
TAGAATTATACAATTTTACCCGAATTTTCACAAAAAGAGGCACGTAATGG
ACTTGATTTTACGATGTCTGCTTTTTCGATGACCGTTTTATCTATTCAAA
GAGTTTTATGTGAATGCTACGCGAATTTGGCAGCGTTTTGTTGATAAAAC
TGTACTCTACTCTGTAGGGGGAGGGGGGTGCAAAATCGTCAATGTTTTTG
TTTTGATGCGCAAATGGTATATAATTTGCATCAATGACATTGCCTTTATA
TTTTGTATACAGGTGTTTGTGTTGTTGGTGCTGTCTTTAGATTTAAGTAT
TCCAGTTTGACCTGTAAATTGTCAGGTTACATTTCATTTATAGTACGAGT
CACATGTCATGTGTTAATGCATATTTTTTAATGTCAATATTTTCATGTTT
TTGCCAAGGCAAATTTGTCGATAAGAGAAATTTATATCGTAATTTAAGTG
AGTATAGGAAAGAGTCATGTATAAAATGACAATTTGGCAAGAGAAAATTT
TGATGTTTTTGTTTAGAGTCTAAGACTAGCAAGAAAACTATTTGACCTTT
AAATAATGTTATTTAAAGTGTCAATGAAATCGAGATCAAAACCTCCTCGA
TCAAATCTACAAATCTATGTTCACTCTGCAAAAAGCAGGGTGTAAAGTAG
TGCTGTCTCCAGGACCTGTCCTTCCGTCCCATGACGGAAATTTGCTTGTT
GGGACAGAACAAAATTAAACCCTGTCTGTCCAAAAATATCAATTTCATGA
CCTAAAACTGATGAAAATGTATTTTTGTAAGCTTAGAATGACATATTCAA
CATTGAAAATCAAAAACATGGGCTCATTGAGTGGGACGGAAAAAAATGTA
AACCTGGAGACAGCCCTGGTGTAAAGTGATGTAATTTTTTTGTAAAACAT
ACAACAGTCCTTGTGTAGTACACACACTTTGCACATAGTTGACGAAGTGG
TTTGCATAGGTGACAGAGTCATTTGCGTAGATGGCAAAATCGGGAAACGG
GCCACTGTAGTTATTTATAGAATCTCAAAGGCTGTAAGGTATGCTCTGAT
TGGTTGCATTCCTCAGTTTCTGATTCGTTCCTAAAAATTCCAAAAGTTCA
AGAAAAAGTCTTATAGACAGGAACATCCTCAATATTGAAAACATCATCCT
GTCAATAGTGCAGAAAATTCTCATTGACAGGATCTAGGAACATCCTGTCA
ATAGCCTTGGACATAGACTTACATGATACCTGAGTGACAAGAAAAGACAG
AGTTTCTATTCAGCGAACAGGCACCCCCGGACGAACAACATTTAGTTACT
GTACTAAAACAACAGTAGCTAATTGAACTATTAGCATAAACCTTGTCTTG
AATTAACCTTCTTTTGAAGACTAGTCGTCAAGACATCCTAAATTGTTTTA
ACCTCATTAACATATCTATTCAGAGTTTTGGTATAAATCTGGTTTTCCAG
TCCTTATCGTGAAATGTCTGACTGTTTCAAAATTTTATCCAGTTGCTTGA
ATAACTATTTTTGGCGTTCTACTTAGCGAATTTTACGTTTCTGATTGATG
TACAATTCCAACCTAGGTTTTAACCCAGGTTGTCCAACCTGGTTCAAAAA
AGTATTTTGCACACTTCTAGAGGTGGCAAGGTGGCCTACGTCTAGAAGTG
GTCATTGACTTAGAATTGAAAGTTTCTGGGTGGGAATCCCTAGCAGGCCC
CAATGTTGTTGGCCCCAACCTTCCTGACCACATAGATTTCATAATTAAGG
GAACTTTATTTTCACACTCGCATCAGTTTTTGGGTTTTCAGAGGATGTCA
TCCATATATTCTTTTATACATTTGTACATGGCCTTACCTGCAAAGCTAGC
GAGAACTCAGTACTGCAGTGCAACCATGCCCCCTTGAGACAATGTGTAGC
ATTGCATCTCAATACTGAACTTACTGAAGCATTGCTTTGAAACTGATATA
ACAACTTTTTACAGCGTCTATTTTCCCGGCTGACCTATGATCACAACTGT
AGTAGGATTTTATGTTCGCAAGGAAGATATGTGTTATGTTAGATATTCGA
AATGTGGCCTTGTAGACATCAAACAACATTACTCAAAGGTGTAAAATATC
TCAAATGTAAAGAGCTGAGAAAGTTTTCTTCTTCTTTTTTTCCAGATCAA
AGAAATTTCGGTGTCCCCGCTGGTGTTTTAAAGATGTCAGAGCAAGATGG
CTTCCCCTCGAAGCGACCGCGACTTGACAGAGATCAGGCTCTGATTACAA
ACAACAACAGCGAACCAGAAAACCGATTAACCAGTGAGGTAGTCATGGCC
GGTTGTTCCAACTCTCTGGAAGTGTGTCAACAAAGCCGTTCTGTACCAAG
AAACTGTGCTGTAGAGACAGAGGCACCCATTGGTCACCCTGTGCCAACAT
TATCCAATCAGGGTGATGCTGCCAAATCACCCACCAATCAGAGACCGAGA
ACAGAGTTGGGTATGGCAGAAGGGGATGCAATACCACATGTTGATCACCA
AAAAAGTACTGTCAAAAACACCAACTCTACTTCCCCTTCCTTAAGTAGAG
ATGATACTGAAGGGACCAATGAACACACTCCGACCCAGTCTTCAACAGCC
AATGAAATGACAGACTCAAACAAAGCAGCCAATCAGAAGTCAGAACAGTC
AGCCAATGAAACTGCAGCATCACCTGTTGCAGAAGTTGTCCCAGTGGACA
GGTCCGTCGCAATGAAGTTCCTACAGATTGAGGCAAACTTGTGCGAGACG
TTGAGAGACCTTGTGTTTCGGGATCCGGTGACGCATTTGTACAATCCTCT
GGACTACGCACGGGAGACGCACAAGGACTATGTCATGAAGTACTGCTGTT
CTCGCAAAGATGTGCTGTTCTTAGGGATGAACCCTGGGCCTTTTGGAATG
GCACAGAACGGGGTAAGTGTGGGTAGGCATGGTATAAGCTAGCCTGGGTG
CCAGACCACCGCGCTCCTGGCGCTAATCTCGCGCCGCCGCCACAGATAGC
ACACGGCCCACTAATTAGCTCTTGCGTGGTAGAAATCAGAGTTCGGCTGC
CAAGCGCTCCCGGGTGACAACTCTCTCCCTACTACCAGGTCTTCCCCGCC
CAAAAGGGGTTATCATCGCATCGTGCGAAAGGTCTGGTATCCAGGCTAGG
TATAATGGTATACGGGTAAGTATACGTAGGCATGTTACAGATACACAGAG
TTTGTCATTGGTATCGTTACAGAAAATCCAGGTCTGGTCCAGGTCCAGGC
CTATACCTGATAATAGTAATACAGTGTCATATCTTGAGAGCGAGGCATTA
GTGTTAGTCACTGTGAGTGTTTCAAAGTATGTTCAAATTGTTTATTGGAA
TATTATAGTTATTTCCAGTGCACATTAGTACTGGCGGTTTAAAGAGCAAC
CTCAAAATGATAGCCTGAGTGTCATCCTGTTTCAGTTCCAGGCTCTGCAT
GAAGGCAATATACTGTAAATGCAGAAATGTTCGCGGTGGTTTTATGATCA
CGGTTTTCGCGGCAACTGTTTCACTGCAAACTTAAAACTACCGCAAACAT
TTTTGTCCAATACTGTGGCAGTATGTGACTATAGTGCTGCTGCGAACTTA
AAACCACCGCGAACACTCCATTTTCCCCTTAGCGCGAATGTAACAGTAAC
CTAGTCTGTATAACGCAAACTCCAGCTGTCCGGGGGTTCCTCTCCCCTCC
CCGCGGGTGGATAGCCGTTACAGGCGGCGAGCGGACACGGGGCTTGGTTG
AAACCAGGCTAACAGTAACCAGTATGTGATCATTTCCAGGTTCCTTTCGG
TGACACCACCTTTGTGAAGGAATTCTTGAAGATCAGCGGAAAAGTGAATC
CGCCGGCCCTCCAGCACCCAAAACGTCCAATCACAGGCCTGGACTGCACA
CACAGCGAGGTGAGCGGGACACGTTTCTGGGGGCTTTTCAGCACGCTCTG
CGAAACACCAGAGAACTTCTTCCGTCGCTGTTTTGTTCACAACTACTGCC
CGCTCGTCTTCATGACCAAAACCGGGAAGAACGTGACCCCGCCGAGTTTA
CACGTGACGCAGCGGGAGCCGTTACTAAGCGCATGCGACACCGCTCTTGT
GGAGGTCATCCGCTTGCTCCAGGTGAAAACGGTCGTTGGCGTGGGGAGGT
TCGCCCAGGAGCGAGCCCAGTACGCGCTGAAAACGGCGGGGTTGGATATT
CCAGTTTTGTTCATTATGCATCCGAGCCCCATCAACCCACAGGCAAATAA
AGGCTGGGCTGCACAGATGATGGTAGAGTTTGAGAAGTTAGGCATCATGA
GGTACCTGGTACCGCAGCCTACAGGTTAGGCAGATAGGCAGCCACTACAT
GAGGTTCATACTTCATACTTCGCACAGATGATGGTAGAGTTTGAGAAGTT
AGGCATTATGAGGTACCTAGTACCAAAGGCTACAGGTTAGGCAGATAGCC
AGCCACTACACAAGCTTCATACTTCAGGTCTCATTCATTTTTTGGCCCAT
AGGCTTACATGTTATGATACGTGTTTTACATGGGCACGTTCGTAATGAAG
GTATAGGAAATATGCCAATGTTATTCATTTCATGTTGAAAACATTTACCG
TTGATCATGTAAAAAAAATGGCCAACAGTTTTTCTACATACAATCTCTTT
TTATACCAGTTCCAAACTGCACCTAGCTACACCCCCAAAAAAGGCACTTT
ACAGCTGTAAGCGCATGACCGCATCACCTACAATGCCGGGCTGTGCACGG
CTGCCGAACTTTACCTGCTAATTTCTTCAGGTACAAACAAGCTTTCATCA
GTTTGACGGTTGAGATCAGTTGGGCTGGCTAAAAGGGTATTTCCCACCGA
TATAAACACACGTTCATGCAGCCGTTAATTTTTTGGGGTACGGACTCTTT
GAGACTGCACCCTCGGAGTAACACATGAATGAGACCTTCATACTTGGCAC
AAATGATGGTAGAGTTTGACTTTGAGGAGTTAGGCATTATAAGGTACCTA
GTACTGCAGTCTACAGGTTAGGCAGATAGGCAACCACTACACGAGCTTCA
TACTTGTTAGGCAGGAAGGTGATGATAATGTTGGGAATTCTTTCAGGATG
AAAAAAAGAAATTGAAGGTATCAAATTTATAGAGATTAAGCCAAGTTTGG
CTTGTACTTATGATATGCTAGCAATGATTATTTTACATACATACATGATT
ATCTTAGTTTTTGTAATAAGGTTTTGTTATATGTTCATTTTTTTACTCTA
TATATCTTTTTATAGTAGAGACATACTGTATGATTATAAGTCCTGCTGAT
GTCGTTATTGCATATTTTGACATTTAGATTATCATTGACAAAATGCGTTG
TTTTTTCATGTATAGCTTCTTGAAAATTCCTAGTGTAAGACTTCTGAACT
TCATTTAGTCATTGTGACTTGAGTTACAAAAAGGTTAAATTACCTACAAA
TAGAGAGAGAGATCTCTTTTTTTAAAAACCTGTTTGACTCAAATGTTTGT
ATTCTTGCACTAGAAATAGTAGAATTATAAAAGAGCAAAGTTTTCTCTTG
AATGAAGCTTGAAAAATAGGTCCCAACCCTCATCATAATCATCATCATCG
GTATGACAAGGTTAACTCTGTATTATTTTAGTTCCAGACTGTCCTTACAA
ACATGGCCATGACCTTGACCCCTGTGGTGACCTCTGACCTCCCCATGTCA
GAGAGAATCTAGGAGGGGATATGTCTCAGCTGTATGGACTGTCTTGTCTT
TTAGTTAGGCAAGGACAACACTTCACCGTCCAAGGCTAGACTAGTTAGTC
GCTTTCCTTCCATACCAATGATTCAACATGCTAGACCAGGACTCCAAAAC
AGAACTGTTCAAAAAGGCAAGGAGCTCGTAAAATTGTGTTTCAGATGTTA
ACTTTGTCATTAATGACTTAATTGGTTGGTTGGTTGGTTGGTTGGTTGGT
TGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTG
GGAAAATCTTTGTTTGCGTTCCCACTGTGGAAATTAGTTGAATTTCGGTT
ACAAAATGTCAGATGATTCCTGTATTGCATCACTAAGATCTATCTGAAAA
ATATGCGTAATGTCATAGTATGTTGAAAACTCTACCGCACTGTTGATGAG
ACTACTTAAGAAAACTGTTCATTAACTGCAAAGGTATAAAGAGTTAGTAT
TTTATTATTTCATTTGAAGGTTTAGCTGAAGTATATTTTGATTATTTTTT
GTCATAAAGGGTACTTATTAGAAAATCCAGTAGTCAATTTGAGTACCTTA
AAAACTCAAAATTAACTGTTTTGCTATCTATTTTTGCCATGAAAAGAACC
AAACTTAGCTTCATACTTAATTGAAATATATTCAATATTTTCGCTTAAAC
TACATAACTCAATATGTATGAAAAAATTGACCTAAAAGTGTTGTTATCAA
ATTGTTACTGTTGTAAATGTTGCGTAATAAAGCATTGTATGATTCCATCT
TGTTTTTGCTTTT Coding sequence (CDS) from alignment at Sc0000000:1639073..1645635+ >BlTCONS00000258 ID=BlTCONS00000258|Name=BlTCONS00000258|organism=Branchiostoma lanceolatum|type=CDS|length=1269bp|location=Sequence derived from alignment at Sc0000000:1639073..1645635+ (Branchiostoma lanceolatum)
ATGTCAGAGCAAGATGGCTTCCCCTCGAAGCGACCGCGACTTGACAGAGA
TCAGGCTCTGATTACAAACAACAACAGCGAACCAGAAAACCGATTAACCA
GTGAGGTAGTCATGGCCGGTTGTTCCAACTCTCTGGAAGTGTGTCAACAA
AGCCGTTCTGTACCAAGAAACTGTGCTGTAGAGACAGAGGCACCCATTGG
TCACCCTGTGCCAACATTATCCAATCAGGGTGATGCTGCCAAATCACCCA
CCAATCAGAGACCGAGAACAGAGTTGGGTATGGCAGAAGGGGATGCAATA
CCACATGTTGATCACCAAAAAAGTACTGTCAAAAACACCAACTCTACTTC
CCCTTCCTTAAGTAGAGATGATACTGAAGGGACCAATGAACACACTCCGA
CCCAGTCTTCAACAGCCAATGAAATGACAGACTCAAACAAAGCAGCCAAT
CAGAAGTCAGAACAGTCAGCCAATGAAACTGCAGCATCACCTGTTGCAGA
AGTTGTCCCAGTGGACAGGTCCGTCGCAATGAAGTTCCTACAGATTGAGG
CAAACTTGTGCGAGACGTTGAGAGACCTTGTGTTTCGGGATCCGGTGACG
CATTTGTACAATCCTCTGGACTACGCACGGGAGACGCACAAGGACTATGT
CATGAAGTACTGCTGTTCTCGCAAAGATGTGCTGTTCTTAGGGATGAACC
CTGGGCCTTTTGGAATGGCACAGAACGGGGTTCCTTTCGGTGACACCACC
TTTGTGAAGGAATTCTTGAAGATCAGCGGAAAAGTGAATCCGCCGGCCCT
CCAGCACCCAAAACGTCCAATCACAGGCCTGGACTGCACACACAGCGAGG
TGAGCGGGACACGTTTCTGGGGGCTTTTCAGCACGCTCTGCGAAACACCA
GAGAACTTCTTCCGTCGCTGTTTTGTTCACAACTACTGCCCGCTCGTCTT
CATGACCAAAACCGGGAAGAACGTGACCCCGCCGAGTTTACACGTGACGC
AGCGGGAGCCGTTACTAAGCGCATGCGACACCGCTCTTGTGGAGGTCATC
CGCTTGCTCCAGGTGAAAACGGTCGTTGGCGTGGGGAGGTTCGCCCAGGA
GCGAGCCCAGTACGCGCTGAAAACGGCGGGGTTGGATATTCCAGTTTTGT
TCATTATGCATCCGAGCCCCATCAACCCACAGGCAAATAAAGGCTGGGCT
GCACAGATGATGGTAGAGTTTGAGAAGTTAGGCATTATGAGGTACCTAGT
ACCAAAGGCTACAGGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000258-exon-Sc0000000-1564993656:1639073..1639114 | BlTCONS00000258-exon-Sc0000000-1564993656:1639073..1639114 | Branchiostoma lanceolatum | exon |
| BlTCONS00000258-exon-Sc0000000-1564993656:1641268..1642034 | BlTCONS00000258-exon-Sc0000000-1564993656:1641268..1642034 | Branchiostoma lanceolatum | exon |
| BlTCONS00000258-exon-Sc0000000-1564993656:1642912..1643413 | BlTCONS00000258-exon-Sc0000000-1564993656:1642912..1643413 | Branchiostoma lanceolatum | exon |
| BlTCONS00000258-exon-Sc0000000-1564993656:1643525..1643557 | BlTCONS00000258-exon-Sc0000000-1564993656:1643525..1643557 | Branchiostoma lanceolatum | exon |
| BlTCONS00000258-exon-Sc0000000-1564993656:1644139..1645635 | BlTCONS00000258-exon-Sc0000000-1564993656:1644139..1645635 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1639073..1645635 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000134 |
|
