BlTCONS00000257 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000257
Unique NameBlTCONS00000257
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1636057..1643453+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000257 ID=BlTCONS00000257|Name=BlTCONS00000257|organism=Branchiostoma lanceolatum|type=mRNA|length=7397bp|location=Sequence derived from alignment at Sc0000000:1636057..1643453+ (Branchiostoma lanceolatum)
CACCCAGCGACGTTGCCATGCCGACAGCTTCAGTGGTCCCTCTGGTATGT ACATGAAAACAATTTATTTTGCAAACCAGTCTTGTGCGATATGCTATTGG CTTTAAGGTTACAAAATGTTTTTTCTAACACTAAAAAGATGTATTCAACC TTCGTTTTGCAAGTGACTAGCTCTGTACACTAGACAAGAATCTGATTCTG AAGGTATTGATAGAGAAATGATAAGATGGATTTTTTGTGTATTCTTCATT CTGGACTGTGGAAGATTAGCCTTTGGCTAAAGGGAATCTCAGTAAATACA ATACAAGCAAGTCCTGCCTTTGTTTCACGTGTATTGTATTGTGGTAAACC AAATAATATCAAATGATGATATAAAAATTAAAAATAAAATCAAGGACAAA CCCACCTTTTCTCTTTTTCTCCATGTAAGCAGCAAAGTCAGGTTCAAGGA GATTTGGTGCAGGTATTATGGGGATTGTGTCATCCACTGGAAAATAAAAT AGACTGATATCAATAACAGATATCATAGGAGGAAAATGTAATTTTCTGTC AAACCCTTAAAAGTATTTTAACACCCTTCATCCAAGGGGTTAACACTGTC TGAGAGCATTGAACAAACAAAATAAAACAGACTGTTATCAAAATCAAAGG AGGTAAATGTTATGTTCCGTCAAATCCTTGTAATAGGCTTTAAATCAACA ACATTCCTCCAAGCTCTGCCTAAACAAAGGGTCCTTGTGGTTAGGGTTGT GGTTGTTAACTTGTTGAAATGAATCTGGTTTTGAATCCCTGGCAGGTCTC AATGTTGTACCCTTGGGAAAGGATTTAACACCTATTTCCTCACTTGACTC GGGTGAAAATGAGTACCTAGCTTCAGTTACGGACGTCCTGTCGGATGGGA CATGTTTGAGTCCCACCTCGAGCATGCTATTAAAAGAACCCAGCACACTT TTCGAAAAGAGTAGGGGTCCTTCCCGGTGTCGAGTGAATCAAACCTTTAA TACAGTCTGGTCCGGGTTGACATCTTGAAAAGTTGATAGTCACCTGTTAT GTCAATCCTTCCACAAGTGTGGCAAATCTCAATAGATAGAATCTGACTTC CTTTAAGAGACTCTTGAAGTAACGGAAATGAACAAAACGAACGGACACGG ATCATGAACCAGCTTTCCCCCTACTATATGTTGTATGTTAGGCATGTAAG TAAGCAAACAAACAAACAAATAAAATTAGTCCTTTTGCTGTCCAGTAAAG AAGTTTTGACACTCACCATCTCCGTATGGCCCTTCTGTCAGCGATGAGGT CGACTGACTCCTGTCATCTGATGACCTCATACTCGTGACGTCCTCATAAG TCTCCTCATCTTGGGTCTGCTCATAAACATCTCCTTAAGGGTGAAGAGAG TTAAGGGCAATTGTTATTTTGCTTTAAGACACATTAAATGCTTTATTCTT TTCTTATTCATTAACAAGACAATGAACAAATGCCAAACACACATCACTTT GCAGGATGGCTGCATTTGCTTCAGATATTTGCCTCTTGTGGTACAGGTAT GCCTCCTAGAGGCAATGTTGTGTACTGCATCTTGGTTAAAATTACCTCCG CTCTTGCAAGCCAACTTTGAAAAGATTACAAAAAGGGTGCTATCAAAACA AAATCAGGGATTTGAGCTGTCATTTGAATACAATAAGAATTCAAAGGACA AGTATCAAATAATTGGGTGCTAAGAAATAAAATTTTGCCTCATATGTTCC AACTGCTACCTCAAAACAGTCCTTGGAATTAAGATCGAGATCTTCATGTC TTTTACTAATTCACTACAGGTGATGGCAAAAATAATCAGACAAAATAAAA GAAATTGTGCTAGCTGTACTATAGTGCACAGTAAAAAGCAGGCAACCTCA GACTGAGGACGAAGCATGGTGCTTTTTCATTAAGTTAAGTGCAATGTGGC TGTGCTACGGTTTGCGTATTCAGCCAAGCACACTGGCTCACCCCTACTCT TTTGGACTGGCTTACTCTTCAAACATGTTACATATATTAAAGTTTTATCA GTACATACAACTCAAGTCTTATTACCTGCTTTTTAGGTAGCACTGGGCTT GAAACAACACAACAACTGAAGAAACTGACGCAACAAAAAATTACATCCTA CCTGAGTCGTCATCACTGCCTTTACTCTCCTGGAGATGTTTAAGTTGGCT CAAGATGTCTTCTCTCTTCTTCTTTGCATCCTTGCCCAGTTTCTCCTTGC CCAACTTCTCCAGAAACTGCTCTACCTCTGCAAAGATAGTTTAGAAGAAA AGAAAAGCTGTGTAAAAACTCTACTCTAAAATGTAAAAGTGGCACACTTT TTGGATGCAACAGTCCACGAAAATGTTTCTCCAATCTCCAGTCATTCGTT GTTTTCTTGGGGACAACCCATTTGAGAGTTTCTTTCCTCCTTCCCTTTAG TATCACCTCACAAAAGATAACATGTGAAAACCAGCTTCCTGGTGCAGGTC CGATTTCAAAGTTCTCATTCATTCCTCGCCCTAACAACACAGTTATTTCG ACGTCAATGTCCCAAGTTATATCTATCAAAAGCACAGGGCAGCAAAACCA CACAGAGATTCATCCTTTCTTGCGTGTATACTGCAAAATAATGTCAATTT TCTTCCACAAAAATAAAATCCCAAACCCGGAAGTAAAATCTGAATAAAGT TAGCAATCGAAATCTTGGACAAAGTAAGAAACCAAAGGAAAATACACCGT AATTTTCATACACACACAAACCTGACAACGTTTTCTTCAAATCCTCTGGC GACTCGGCCATTTTCCCCCAAAGAATCACAGACAGAGAGGCAACTTTAGC TCGTGCGAAGCTTTCAGATATTTTTAAAGCTTTTCAACTTCCTGAAAAGT TCAAGCCGGAAGGGGAGGGGACCATGACAGGAAGTAAGTTGACGTCATCT CTAGTTGCAGAAAATCTTACCTGATTGGCTGAAATAGTTTCAGGTGACCA ATCAGCATGCTCCTTACAGAAAGCAGGCTATCTCCACAAGGTGGGAGGGT ACAGTGAGGTAGGTAATAGAATTATACAATTTTACCCGAATTTTCACAAA AAGAGGCACGTAATGGACTTGATTTTACGATGTCTGCTTTTTCGATGACC GTTTTATCTATTCAAAGAGTTTTATGTGAATGCTACGCGAATTTGGCAGC GTTTTGTTGATAAAACTGTACTCTACTCTGTAGGGGGAGGGGGGTGCAAA ATCGTCAATGTTTTTGTTTTGATGCGCAAATGGTATATAATTTGCATCAA TGACATTGCCTTTATATTTTGTATACAGGTGTTTGTGTTGTTGGTGCTGT CTTTAGATTTAAGTATTCCAGTTTGACCTGTAAATTGTCAGGTTACATTT CATTTATAGTACGAGTCACATGTCATGTGTTAATGCATATTTTTTAATGT CAATATTTTCATGTTTTTGCCAAGGCAAATTTGTCGATAAGAGAAATTTA TATCGTAATTTAAGTGAGTATAGGAAAGAGTCATGTATAAAATGACAATT TGGCAAGAGAAAATTTTGATGTTTTTGTTTAGAGTCTAAGACTAGCAAGA AAACTATTTGACCTTTAAATAATGTTATTTAAAGTGTCAATGAAATCGAG ATCAAAACCTCCTCGATCAAATCTACAAATCTATGTTCACTCTGCAAAAA GCAGGGTGTAAAGTAGTGCTGTCTCCAGGACCTGTCCTTCCGTCCCATGA CGGAAATTTGCTTGTTGGGACAGAACAAAATTAAACCCTGTCTGTCCAAA AATATCAATTTCATGACCTAAAACTGATGAAAATGTATTTTTGTAAGCTT AGAATGACATATTCAACATTGAAAATCAAAAACATGGGCTCATTGAGTGG GACGGAAAAAAATGTAAACCTGGAGACAGCCCTGGTGTAAAGTGATGTAA TTTTTTTGTAAAACATACAACAGTCCTTGTGTAGTACACACACTTTGCAC ATAGTTGACGAAGTGGTTTGCATAGGTGACAGAGTCATTTGCGTAGATGG CAAAATCGGGAAACGGGCCACTGTAGTTATTTATAGAATCTCAAAGGCTG TAAGGTATGCTCTGATTGGTTGCATTCCTCAGTTTCTGATTCGTTCCTAA AAATTCCAAAAGTTCAAGAAAAAGTCTTATAGACAGGAACATCCTCAATA TTGAAAACATCATCCTGTCAATAGTGCAGAAAATTCTCATTGACAGGATC TAGGAACATCCTGTCAATAGCCTTGGACATAGACTTACATGATACCTGAG TGACAAGAAAAGACAGAGTTTCTATTCAGCGAACAGGCACCCCCGGACGA ACAACATTTAGTTACTGTACTAAAACAACAGTAGCTAATTGAACTATTAG CATAAACCTTGTCTTGAATTAACCTTCTTTTGAAGACTAGTCGTCAAGAC ATCCTAAATTGTTTTAACCTCATTAACATATCTATTCAGAGTTTTGGTAT AAATCTGGTTTTCCAGTCCTTATCGTGAAATGTCTGACTGTTTCAAAATT TTATCCAGTTGCTTGAATAACTATTTTTGGCGTTCTACTTAGCGAATTTT ACGTTTCTGATTGATGTACAATTCCAACCTAGGTTTTAACCCAGGTTGTC CAACCTGGTTCAAAAAAGTATTTTGCACACTTCTAGAGGTGGCAAGGTGG CCTACGTCTAGAAGTGGTCATTGACTTAGAATTGAAAGTTTCTGGGTGGG AATCCCTAGCAGGCCCCAATGTTGTTGGCCCCAACCTTCCTGACCACATA GATTTCATAATTAAGGGAACTTTATTTTCACACTCGCATCAGTTTTTGGG TTTTCAGAGGATGTCATCCATATATTCTTTTATACATTTGTACATGGCCT TACCTGCAAAGCTAGCGAGAACTCAGTACTGCAGTGCAACCATGCCCCCT TGAGACAATGTGTAGCATTGCATCTCAATACTGAACTTACTGAAGCATTG CTTTGAAACTGATATAACAACTTTTTACAGCGTCTATTTTCCCGGCTGAC CTATGATCACAACTGTAGTAGGATTTTATGTTCGCAAGGAAGATATGTGT TATGTTAGATATTCGAAATGTGGCCTTGTAGACATCAAACAACATTACTC AAAGGTGTAAAATATCTCAAATGTAAAGAGCTGAGAAAGTTTTCTTCTTC TTTTTTTCCAGATCAAAGAAATTTCGGTGTCCCCGCTGGTGTTTTAAAGA TGTCAGAGCAAGATGGCTTCCCCTCGAAGCGACCGCGACTTGACAGAGAT CAGGCTCTGATTACAAACAACAACAGCGAACCAGAAAACCGATTAACCAG TGAGGTAGTCATGGCCGGTTGTTCCAACTCTCTGGAAGTGTGTCAACAAA GCCGTTCTGTACCAAGAAACTGTGCTGTAGAGACAGAGGCACCCATTGGT CACCCTGTGCCAACATTATCCAATCAGGGTGATGCTGCCAAATCACCCAC CAATCAGAGACCGAGAACAGAGTTGGGTATGGCAGAAGGGGATGCAATAC CACATGTTGATCACCAAAAAAGTACTGTCAAAAACACCAACTCTACTTCC CCTTCCTTAAGTAGAGATGATACTGAAGGGACCAATGAACACACTCCGAC CCAGTCTTCAACAGCCAATGAAATGACAGACTCAAACAAAGCAGCCAATC AGAAGTCAGAACAGTCAGCCAATGAAACTGCAGCATCACCTGTTGCAGAA GTTGTCCCAGTGGACAGGTCCGTCGCAATGAAGTTCCTACAGATTGAGGC AAACTTGTGCGAGACGTTGAGAGACCTTGTGTTTCGGGATCCGGTGACGC ATTTGTACAATCCTCTGGACTACGCACGGGAGACGCACAAGGACTATGTC ATGAAGTACTGCTGTTCTCGCAAAGATGTGCTGTTCTTAGGGATGAACCC TGGGCCTTTTGGAATGGCACAGAACGGGGTAAGTGTGGGTAGGCATGGTA TAAGCTAGCCTGGGTGCCAGACCACCGCGCTCCTGGCGCTAATCTCGCGC CGCCGCCACAGATAGCACACGGCCCACTAATTAGCTCTTGCGTGGTAGAA ATCAGAGTTCGGCTGCCAAGCGCTCCCGGGTGACAACTCTCTCCCTACTA CCAGGTCTTCCCCGCCCAAAAGGGGTTATCATCGCATCGTGCGAAAGGTC TGGTATCCAGGCTAGGTATAATGGTATACGGGTAAGTATACGTAGGCATG TTACAGATACACAGAGTTTGTCATTGGTATCGTTACAGAAAATCCAGGTC TGGTCCAGGTCCAGGCCTATACCTGATAATAGTAATACAGTGTCATATCT TGAGAGCGAGGCATTAGTGTTAGTCACTGTGAGTGTTTCAAAGTATGTTC AAATTGTTTATTGGAATATTATAGTTATTTCCAGTGCACATTAGTACTGG CGGTTTAAAGAGCAACCTCAAAATGATAGCCTGAGTGTCATCCTGTTTCA GTTCCAGGCTCTGCATGAAGGCAATATACTGTAAATGCAGAAATGTTCGC GGTGGTTTTATGATCACGGTTTTCGCGGCAACTGTTTCACTGCAAACTTA AAACTACCGCAAACATTTTTGTCCAATACTGTGGCAGTATGTGACTATAG TGCTGCTGCGAACTTAAAACCACCGCGAACACTCCATTTTCCCCTTAGCG CGAATGTAACAGTAACCTAGTCTGTATAACGCAAACTCCAGCTGTCCGGG GGTTCCTCTCCCCTCCCCGCGGGTGGATAGCCGTTACAGGCGGCGAGCGG ACACGGGGCTTGGTTGAAACCAGGCTAACAGTAACCAGTATGTGATCATT TCCAGGTTCCTTTCGGTGACACCACCTTTGTGAAGGAATTCTTGAAGATC AGCGGAAAAGTGAATCCGCCGGCCCTCCAGCACCCAAAACGTCCAATCAC AGGCCTGGACTGCACACACAGCGAGGTGAGCGGGACACGTTTCTGGGGGC TTTTCAGCACGCTCTGCGAAACACCAGAGAACTTCTTCCGTCGCTGTTTT GTTCACAACTACTGCCCGCTCGTCTTCATGACCAAAACCGGGAAGAACGT GACCCCGCCGAGTTTACACGTGACGCAGCGGGAGCCGTTACTAAGCGCAT GCGACACCGCTCTTGTGGAGGTCATCCGCTTGCTCCAGGTGAAAACGGTC GTTGGCGTGGGGAGGTTCGCCCAGGAGCGAGCCCAGTACGCGCTGAAAAC GGCGGGGTTGGATATTCCAGTTTTGTTCATTATGCATCCGAGCCCCATCA ACCCACAGGCAAATAAAGGCTGGGCTGCACAGATGATGGTAGAGTTTGAG AAGTTAGGCATCATGAGGTACCTGGTACCGCAGCCTACAGGTTAGGC

Coding sequence (CDS) from alignment at Sc0000000:1636057..1643453+

>BlTCONS00000257 ID=BlTCONS00000257|Name=BlTCONS00000257|organism=Branchiostoma lanceolatum|type=CDS|length=1350bp|location=Sequence derived from alignment at Sc0000000:1636057..1643453+ (Branchiostoma lanceolatum)
ACCCAGCGACGTTGCCATGCCGACAGCTTCAGTGGTCCCTCTGATCAAAG
AAATTTCGGTGTCCCCGCTGGTGTTTTAAAGATGTCAGAGCAAGATGGCT
TCCCCTCGAAGCGACCGCGACTTGACAGAGATCAGGCTCTGATTACAAAC
AACAACAGCGAACCAGAAAACCGATTAACCAGTGAGGTAGTCATGGCCGG
TTGTTCCAACTCTCTGGAAGTGTGTCAACAAAGCCGTTCTGTACCAAGAA
ACTGTGCTGTAGAGACAGAGGCACCCATTGGTCACCCTGTGCCAACATTA
TCCAATCAGGGTGATGCTGCCAAATCACCCACCAATCAGAGACCGAGAAC
AGAGTTGGGTATGGCAGAAGGGGATGCAATACCACATGTTGATCACCAAA
AAAGTACTGTCAAAAACACCAACTCTACTTCCCCTTCCTTAAGTAGAGAT
GATACTGAAGGGACCAATGAACACACTCCGACCCAGTCTTCAACAGCCAA
TGAAATGACAGACTCAAACAAAGCAGCCAATCAGAAGTCAGAACAGTCAG
CCAATGAAACTGCAGCATCACCTGTTGCAGAAGTTGTCCCAGTGGACAGG
TCCGTCGCAATGAAGTTCCTACAGATTGAGGCAAACTTGTGCGAGACGTT
GAGAGACCTTGTGTTTCGGGATCCGGTGACGCATTTGTACAATCCTCTGG
ACTACGCACGGGAGACGCACAAGGACTATGTCATGAAGTACTGCTGTTCT
CGCAAAGATGTGCTGTTCTTAGGGATGAACCCTGGGCCTTTTGGAATGGC
ACAGAACGGGGTTCCTTTCGGTGACACCACCTTTGTGAAGGAATTCTTGA
AGATCAGCGGAAAAGTGAATCCGCCGGCCCTCCAGCACCCAAAACGTCCA
ATCACAGGCCTGGACTGCACACACAGCGAGGTGAGCGGGACACGTTTCTG
GGGGCTTTTCAGCACGCTCTGCGAAACACCAGAGAACTTCTTCCGTCGCT
GTTTTGTTCACAACTACTGCCCGCTCGTCTTCATGACCAAAACCGGGAAG
AACGTGACCCCGCCGAGTTTACACGTGACGCAGCGGGAGCCGTTACTAAG
CGCATGCGACACCGCTCTTGTGGAGGTCATCCGCTTGCTCCAGGTGAAAA
CGGTCGTTGGCGTGGGGAGGTTCGCCCAGGAGCGAGCCCAGTACGCGCTG
AAAACGGCGGGGTTGGATATTCCAGTTTTGTTCATTATGCATCCGAGCCC
CATCAACCCACAGGCAAATAAAGGCTGGGCTGCACAGATGATGGTAGAGT
TTGAGAAGTTAGGCATCATGAGGTACCTGGTACCGCAGCCTACAGGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000257BlTCONS00000257-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000257-exon-Sc0000000-1564993656:1636057..1636100BlTCONS00000257-exon-Sc0000000-1564993656:1636057..1636100Branchiostoma lanceolatumexon
BlTCONS00000257-exon-Sc0000000-1564993656:1641268..1642034BlTCONS00000257-exon-Sc0000000-1564993656:1641268..1642034Branchiostoma lanceolatumexon
BlTCONS00000257-exon-Sc0000000-1564993656:1642912..1643453BlTCONS00000257-exon-Sc0000000-1564993656:1642912..1643453Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1636057..1643453 +
Properties
Property NameValue
GeneIDBlCUFF000134