BlTCONS00000256 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000256
Unique NameBlTCONS00000256
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1623659..1632514+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000256 ID=BlTCONS00000256|Name=BlTCONS00000256|organism=Branchiostoma lanceolatum|type=mRNA|length=8856bp|location=Sequence derived from alignment at Sc0000000:1623659..1632514+ (Branchiostoma lanceolatum)
GGGGTAGACTTGATTTTTTTGGCGGGCAACCAGAGGGGGATCATTGCTAC ACACTGAAAGGTAAGCACGATGTCACCGCTTGTTTTGAACAACTTTTCTC GCCAATTTAACTCTTATCAGCCCGTTTCCTTGTCAGACTAGTTCGCGTAG ACCTCTCCGAATCTCCCGGTCATTGATTTATGGAAAGTTTTGGTCAGATA GTTGCCTTCTAAGGTGGTGTCGGAGAGAAAAAGATCTTCGAAAATTTCCA TTTTCTTTTTTCAACATGGCCGCCTTGCGGTCACGATGAAGACTCCGCAC AAAGTAGCTCCTTCAGTACCTAACTCCGTGCCGTAGTTTGGGGGTGCTAT GGAGTGTTAAGACGACTGTGATGCCCTGTTAATAGTTTTGGTGTGAGAAT TGTGTAGATTTTCCCTCAGGTTAGCTCGTGGTGTTTGTAGTTATGTATCG GAGCGCGAGCAAGTTTTCCCCTCAAAAGGCCCCACGCCGTCAAACTATGC GGCTCTCACCTGGCCTGTGTCTCATCTAGGGCGACGAACGGCATATTTTT ACTAAACACGTCACATTTCTAACGCCAAACAGAGACATTTCGAGGTACCA AATTAAGGACGACTTTATTTAAAGCTGGATAGATGCAGGCACGATTTGGG AAGTTCTTTGTTACTTCTTTTCAGGACAGAAGTCATGTGCAGATGCATAC CTGTTGTAAACAATGTGGCATTGAATGTGGAATAGCAGAAAGACAAAGGG TTCTTTTGTCTTTGGAAATCTACATCTCTTTATTACAGGACATCTCTCCA GAAATCACACCTTAGCAACTATTTTTTTTCCCTTGACTCTGGGTGTAATG ACTAGTTTGAGGAAAGTTGTATGTTCATAAGATTAGCATACAATATTAGG AATGGTTTTATTGTGAAATAATGGAATGGGGTCAACACAACCCAAATTCA CAAGGATAATTTGGGAGGGGGGGCGCAAATTCCTATCATACAGGTACAGT ATATTCATAAGTGCCCTTGACTCTTGGTATAATGACTGGTTTGAGGAAAG TTGTATGTTCATAAGATTAGCATACGATTAGGAATGGTTTTATTGTGAAT TAATGGGATGGGGGTCAAAACAACACAAATTCACAAGGATAATTTGGGAG GGGGCGCAAATTCCTATGATACAGGTACAGTATGTACATAAGTGCCCTTG ACTCTAGGTGTAATGGATGGTTTGAGGAAAGTTGTATGTTCATAAGATTA GCATACAATATTAGGAATGGTTTTATTGGAAAATAATGGAATGGGGGTCA AAACAACACAAATTCACAAGGAAAATTTGGGAGGGGGGTGAATTCCTATG ATACAGGTACAGTATATACAAAAGTGCCCTTGACTCTTGGTATAATGACT GGTTTGAGGAAAGTTCATAAGATAAGCATAGGATTAGGAATGGTTTTATT GTAAAATAATGGGATGGGCTCAATAGATCACAAATTCAGAAGGATAATTT TGGAGGGGGTGCGAATTCCTATGATACAGGTACAGTATGTACATAAGTGC CCTTGAGTCTGGGTGTAATGACTGGTTTGAGGAAAGTTGTATGTTCATAA GATTAGCATACAATTAGGAATGGTTTTATTGTGAAATGATGGGATGGGGG TCAAAACAACACAAATTCACAAGGATAATTTTGGAGGGGGTGCGAATTCC TATGATACAGGTATAGTATGTACACAAGTGCCCTTGACTCTGGGTGTAAT GACTGGTTTGAGGAAAGTTAATGTTCATAAGATTAGCACATGATTAGGAA TGGTTTAATTGTAAAATAATGGGATGGGGGTCAAAACAACACAAATTCAC AAGGATAATCTTGGAGGGGTGTGTGAATTCCTATGATACAGGTACAGTAG GTACATAAGCGCCTTTAACAACCTCAACATTACTATTGAATTTTGACTTA TTTATGATTGTGCTGATATAATTTATGTAAATTTTATTTTGTACTCTTAA TACGTGACTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTAAATTTTTTTTTGTACTCTTAATCCGTGACCCCCCCCCC CCCCCCACCCCCCCTCCACTTCGACCTTGTTGAAATGTGGCCTTTGTGGC CGAACAAGCTATCAAAAGGAAATAAAGGCTTTGTTTGATTGAATAGAGGG GTAACCTAAATTTACATTTCAGCACAATGTCAAAAAGAAATTTCACTTTC TCTACAAAGACCATCTGATCACAAATGTAACAAAGAGTGCTACCTCAGCA GAAAACTTGGAAAGCCACCCCACCATAATGTAATTCAATCCCTCCTATTG AAATATATACTTCTACAAAGTTCTATGAAGGTCACTCTTCACAAATTGCT GACAGCCCTTTGTGACATAGGCTTACCTGTCCTTGACGTTTGTCACCTGT GTTTTCTGCCCTCGGGCTTCGCATTCTCTCAGACACAGACAGCTGCTAGT TTAACAACTGAAATTTTACACTAGATATTTGAAACTATCCACTAGAAATG CTCCTCCCATATTTTATATATGATGATTTCCACACTACAATGTCCTATAG ATTCTGGCGAATTTTGCCCCTAAAGAGATCTGCTTGTCTGTCTGTCCTTT TCATGTTACTTGCAATTAGCCTCCGGACAAGAATTTGCAAAAAAAATAAA AATATCCGTCTTTTTTTCAGCGGTGCTGTTGGATTCTACTTCTGATCGTC CTACAAAGGATGGGAAAGAAGAAGATGAAGAAATCCGGAGCTGAGATGGA GGAAGAAGAAGAGCCTGAAGAGTATGTTGTGGAGGAGGTGCGGGACCGAC GTGTGCGCGGCGGCAAGGTGGAGTTCCTTCTGAAGTGGAAGGGATACTCC GAGTAAGTTCTGCAAATATTTTATTCTGACTGTAGTGTTGCATGGCTGTC TTCAGGAACTGTCCCGTCATCCCAGGACGAAAATTCCCTTGTCGAATTCA CCCCATAACATTCGTACCAAAGATACTTCATGACATGACATTGATAAAAA CGTTTTTTCGTAAGCTGAGAGTCACAGATTTATCAACAAATAAAAACAAC ACTGGCTCCCAGACAATGAATGGGATGGAATAAATTGAAAGCAGGAGACA GCCCTGGACTTTTTTCTGCCAACACGTATAGTGCCATAGCATAGCATTTA TCATTACAGATTCTGCAACATATTATAACTATGATTAGGGTTTTTTCTAG AAAAATTAAACAAGAGGGAGCACACACAGGCGAGGTAGCGAATTCTATGT ATTTATGGAAGAAATATATCGCTGAGGGAAGTCTGTATGATGGGGATTAT GCTAAAATCTGAATTCGACAAGAAGGGGGCTGGGCTGAAACAAGAGGGCG CAGCGCCCCTCTTTCCCAATGTGAATGAATCCCTGATGATATTTCTTGCT CGTGTATCTTGGCAAGTTTTTCTTGTTGCCTTTATACTGAAATTAACTGG GTTACTTCGTACTTCAGTGCCCAAAATTTGCTTTCTGCATTATTCGATCC ATGATACAAAGTCTCTTAGCATGTAAAGTGTATTTGTTAAGCTGTTGACA TATTTCTGAAGATTTCCGGAGAGTATTTCAAGCCCCTTTTTGCCAATGTG TTTTCCATGCCCTTGGATTTAGTATTTGTTAAAAGCACTCCAAGTACAAA TAGTTGCATAAAAGCCTGAAAGGGGGTCTTCTTACAGGTTTATATATATA TGGCCTCTGTCGGTCTGTATTTGCCATGGTAAAATCCTAATTCACAACAG CCCTACAGCATCGACTGGCTAAACAGCCCTTTATGAGAATGGCAGTCTCT GCCACAAAAATTACATCTGTGAGCTGACTCAGTTCTGTTACAAAGCTCTT TTCTGCGGATCTGCTTTTCTTCTGCGCTGTGCATCAGTCTGGCTTCTCCT GATTTGAGCTTACAGGTGGTGCTTCACTAACAGTAACAACTGGGTAATTA ATTTGCTTGCAGGATCGAAAATACTTGGGAGCCAGAGGAAAACCTGGACT GCCCCGATCTGATTGCGGAGTTCATGAGGAAGTGGAACCAGAACAAAGCA GCCAAAACAGACGAAAAGAAGAGAAAATCCACATCCACCGTGAACGGCAC AGAAGAGTCCAAAAGGAAACGGAAGGCAGAAGAGGTGGGTACGGTTTGTG CGACAGGCAGACATTTTAATGGAGTGGCATCATGAATAAATTATAGGGGC ATGTTTTTATTAGTCTTCGTGATGAATTTTTCAGATGAAGAGTGAATGTT TGACGAAAAGTGTTGCCCTTGGCTGGCCGTGTTGGTTTCCACGGATCTTT CTTAAACCTCCCGTGCCAGTTTGTATTTTTTTAGTTTTTTTTCTGCAGAA CTCATATTGTGATTTTGCACTGGTGTGAAGAACTGTTAGTGAGTTCTGAA ATTTCTTGTGGAAAATCATCTCTGAAATCTACATGTCTCAGGTGGAAACA TCTTTGACATAGTCTTAGTATTGCATGTAAACCCCAAATGTTGTGACTCT AGAAACGTAGCAGCCCCAGGAAGGCCGGGACACACATGGTGATGTACGAG GTTGGTGATTGGGTGCAATGGAATCTCTCCTCTTCGATTCAAACCAAACC TTCCTCTGGATTGAGCCTTTTGCTATTTGTTTGTTTCTTTACAACTGTGT GGACTGAAATGTGGAAACATTCTTCATAACATACTTTTTTTCAGCTTTGT CTTTGAAACTGACTTTCATTGATTTGCATACACCGCCTTTGACTTGCTTT AGGTAAAGAATTTAGATAAAAAATGGATGCAATGGAAAGAAGCAGTCATG AGTTCAAAAGTAAGCTGTAAATTAGATAAAGGTACAGTTTTCTTTTTAAA ATACTGGCACCGCAAACATTTCTGCTTTTACAGTACTTGAAATTGACCTT TTTTGTGCCCAACTTAGGATGATGAGGACAAACCCCGCGGCTTCGACAGA GGTCTTGAGCCGGAGAGAATTATCGGAGCTACAGATTCCAGTGGAGAGCT CATGTTCCTTATGAAGTGGTGAGTGAATTATCATCTATCACTAAGGCCAC ACCAATTTACTTTCTTGGTTAATGGAATTTGAAAAGAATGCTACATTGGA AAATCAACATGAAAACAGAATCTCAGAGGAAAGTCTGTACTTTGGTGCAC ACAGTTTCATGGAGTGAACAGGGTCGGGTGCAAGTTTTCACCCCAGCCTT CTATTTTAATGATGTCCTCATGCTAAAATTAAAAAAAGAAATCTGTTAAC CAAGAAATTAAATTGGTGTGGCCTAAGTATCAGGCTTTACTTTTTGGTTA AATAAGGCCATGATGATTCAATTGTATGGATGACATCCATGCAGGCATCA ATTTTTCCCCAAGAAAAAAGCTGTCAATCATAGCACAAAGCAGCTTCAAG ATATGGCCAAAAAATATTTTGGAGAACAATACTAATGTCGTAGAATGCCA AAGAAGAAGATGTGAAACTGAAAGAACAAAAACCTATTATTCGGTATACC ATTCTTTGTTTGCTTGAGCATTTGTTCATCCTTCCTGGCCCATGTAGATT TCATAATAAAGGAAAGTTTTTTTTGCCGAGCTTTTTTTATTTGCACGCTT GCATTAATTTCGGGGTTCCCAGAGGATGTCATCCGTACAATATCTCACAC GTGCAGTAGAGCATAATGTTGGTAGAATATCTCGCCATGACTCACGAATG ATTGTGTTGTATCTAAAGTCATGCAAGAATTGAATTTTTTCATGTTGAGT TAACGTATTGTAACGTTCGCCCTCTTAGATGCTACTATCTCACATGACAG TTGAGCATGATTTCGGTAGAATGTCTCCAAAATGACCAAAACGAAAGAAC ACGAACCATGTGCCAGCTCTCAGTCTTATGTATGTTGTACCATGTATGTG GAATAACATGTGTATAGATTTATGAGGACATTAAATGATGTAAACTGTAC TTTTGTTATAACTTTTGCTTGACCCTTACCTCATGGCATCAATGAAAAGC AGCCTGATTTGAGCTTCTCATGAATAAACAAAGGTTCAAACAAAAATGTC TGTGTACGCCAAAAATAGTTACTCAAGCAACTGGATAAAATTTTGAAACA GTCAGATGTTTCAGACAGCATCCGCTATCTTTCGTCAGTGACTTTTTATC CAGTTTCTTGAGTAACTATTTGGGGCGTATCTAATTTCCTGGATGTCTAA TCTTCATCAACGTAAAATGTCTGTGTGTCTGCAGGAAGGGGAGCGAGGAG GCTGACCTGGTTCCCGCGCGGATAGCCAACGTAAAATGCCCACAGATCGT CATCCAGTTCTATGAGGAGAGGCTAACCTGGCATTCGTACCCCAGCGAAG AGAACCAGAACGACTCTGGCAGCACTTCAGAAACCGTGAACGAAGTCTGA TGACTGCCCATTTTCCAGAGTTATTTTTTTTTCTTTCATATCAAAAGTAC TTTCCTGATGAGCTAGGAAAAGGGAGCAACCATATTCTCCTGTAGTGACA CTCTTAAAAAGGTTGATCACTGAAACTTTCACCGATATGTGTACGGGGGT CTTTTCCAAAGCACACTTGTTATCAGTCAAACTTCTTAACTATGTATGTC TCTAATAGTTAGGTCTATTCAGCAAAAGGATCGTATTTGTATGAGTAAAA CCATTCCCCACCTACGAGTATATTTGTTACTTGGAGGTTTTGGCCTTAAG GATGTAAAAAAAAATGAGGTTGGCGAGAGAGTGGTATTATGAGGCCTAGA AACAGATAAGAAAGACTTGTGGACTTCTTGGGCTGCAAAAGTTGTGTTGT AGGTATTAAGGTTGCTTGGAAAATGTCTTGTATTGCACATGTATTGCCAC ATTGAAAGTGGGGCTTGACTAGGACTTAAACACAACCATGCAAATATTGA AAGGAACCCTACAGAGTGGACTACAATAAGGTTGTTCCAAGGGAATTATC TAAAATGGTGAAAATCTGGGGTTGCTTGTTTTGGGAAATGGTTTACAACA TTCACAGACAATGATTTATTTTTTGGATAAAAGTGTATCTCATACTAGTA ATGCTAAACCTATATCTTATCAATGTGGCCTACAGGGCAGCAAGGAAAGG AGTATGTCCTTGTTTTTGTAAATAGGCTCCAGCCAAGCCAAACTGAAAAT GCCATGCTGAAGAGAGGCTAATCTTTGGAGGAATTTTAGTTATAGCTTTT TTTATATGATGTAGGAGGATGAGCTGTTTAGCATTTTATGTAGATGTCTT GTAGTGAGCACCCTGCGTAGATAGTGGCTATCGCTTGCGTTTGGCAGTCT GTGCCCTAAGTCAGGAATAGACTTGTATTGACCCTTTCATTAATTTGTAG TACTAAGAACCTGATATTTCTGGAACATCTAACATTTCACATTAACCTCA TCCTCGTTAAACCAGGACCCATATCGCTCCACGTTACATCGGTCGCGGAA TGGGCCCTGGTAAAAAGCTTCGCCACATATGGTTATGGCAGGTCGATGAG ACTTGCTCATAAATTATTAATGAGCTGACCTTATTTGACACAAACGGCAG TTGTAGCTCATGAATAATTAATGAGCTAGCCGTAACACGTAACCTGATTG GTCGATAGCTTCCCAGCGTTCTTTGCGCGTTGGCTTCCCACCTGATTGGT CGATAGCTTCCCAGCGTTCTTTGCGGGTTGGCTTCCCATGAGAGGAAGCA AACCCTCTGATTGGCTGAAGCTGTTTTGGTGCCGACGTCGTCATAACCAT ATGTGGCGAAGCTTTTTACCAGGGCCCATCCCGCGACCGATGTAACGTGG AGCGATATGGGTCCTGGTTTAACGAGGATGATTAACCTGAGAGATTACGT GTAACAGAGGTATTTCAAATTCCCATTTTATTGCAGTTCAGCTGAGGATA CAGGGCGATTTTTTTCCTCTCAGTACAGGCACCCTCGGGTATGAAATCAC TGTAACAAACTGTTAGTATGTATGTGTACTATATTATGTGCGGAGTCCTT GGTCACATTACACATAGGCTTTGCTCAGTGTTGCTTAATTTCCACTTTCT TATAAATAATAATAACAGCAAAGTACATGTACAACATTTCTACTTACCTA ACAACTTTCAAAAACATTCAATCAGTGGTCCAACTTACAAATTTCATGAA CATTTTTCTAATGTATGTGTTCCTATTAATGTCCCATTATTACCTGGTAA CAGTGAAACTGTATGACTAGCAGAACAGTTTATGGTGTATTCTGGAATAC TTGCAGGCTAGGAGAGTCAGTTTTTGTCAGCTTGTACATTTTGAACACTG GGTACTGACGTGTTGTACTGTTGCTTTGGCTCTTTAATGACATACCTTTC TCTGGAGTATTAGTTGTGTATTTATGTTCAATAAAAGTTCTTGTGTACAG AGTTCAATGTCTGTTACTTCCACATGACTCGAGTCAATATGTTCACTTTT CTCAAAGATCTTATATAGTGCTCTCAAAAGAATGCTGAAATAATGTGACA ATACATATGTGTCTCTTTGTACAGAAGACAAGAAAATAACCTAGTCGCAA CACATG

Coding sequence (CDS) from alignment at Sc0000000:1623659..1632514+

>BlTCONS00000256 ID=BlTCONS00000256|Name=BlTCONS00000256|organism=Branchiostoma lanceolatum|type=CDS|length=414bp|location=Sequence derived from alignment at Sc0000000:1623659..1632514+ (Branchiostoma lanceolatum)
ATGGGAAAGAAGAAGATGAAGAAATCCGGAGCTGAGATGGAGGAAGAAGA
AGAGCCTGAAGAGTATGTTGTGGAGGAGGTGCGGGACCGACGTGTGCGCG
GCGGCAAGGTGGAGTTCCTTCTGAAGTGGAAGGGATACTCCGAGATCGAA
AATACTTGGGAGCCAGAGGAAAACCTGGACTGCCCCGATCTGATTGCGGA
GTTCATGAGGAAGTGGAACCAGAACAAAGCAGCCAAAACAGACGAAAAGA
AGAGAAAATCCACATCCACCGTGAACGGCACAGAAGAGTCCAAAAGGAAA
CGGAAGGCAGAAGAGAGGATGATGAGGACAAACCCCGCGGCTTCGACAGA
GGTCTTGAGCCGGAGAGAATTATCGGAGCTACAGATTCCAGTGGAGAGCT
CATGTTCCTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000256BlTCONS00000256-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000256-exon-Sc0000000-1564993656:1623659..1623718BlTCONS00000256-exon-Sc0000000-1564993656:1623659..1623718Branchiostoma lanceolatumexon
BlTCONS00000256-exon-Sc0000000-1564993656:1626629..1626810BlTCONS00000256-exon-Sc0000000-1564993656:1626629..1626810Branchiostoma lanceolatumexon
BlTCONS00000256-exon-Sc0000000-1564993656:1627921..1628092BlTCONS00000256-exon-Sc0000000-1564993656:1627921..1628092Branchiostoma lanceolatumexon
BlTCONS00000256-exon-Sc0000000-1564993656:1628874..1628976BlTCONS00000256-exon-Sc0000000-1564993656:1628874..1628976Branchiostoma lanceolatumexon
BlTCONS00000256-exon-Sc0000000-1564993656:1630193..1631341BlTCONS00000256-exon-Sc0000000-1564993656:1630193..1631341Branchiostoma lanceolatumexon
BlTCONS00000256-exon-Sc0000000-1564993656:1631782..1632514BlTCONS00000256-exon-Sc0000000-1564993656:1631782..1632514Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1623659..1632514 +
Properties
Property NameValue
GeneIDBlCUFF000133