BlTCONS00000243 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000243
Unique NameBlTCONS00000243
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1498329..1506905+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000243 ID=BlTCONS00000243|Name=BlTCONS00000243|organism=Branchiostoma lanceolatum|type=mRNA|length=8577bp|location=Sequence derived from alignment at Sc0000000:1498329..1506905+ (Branchiostoma lanceolatum)
CCTGGTAGTACACTCCGTGCACGCGCAGCACGCATAACCGGGCGTATTCC GACGAAGTCAGCACAAATCTCAGCGACCAACGGTCACCCTGCTTCCTGTT TACCATTAACTTACTGCTGAGCTGGGTAAAACACACGGGGAAAAGTTCCG CCCGAACATTTGTGCCAAGAAACTTGGAGGCGAAGCAGGCGCCTAGAACT TGGCCCGGTCCGTTTTGCCGAAAGTATATCCAGCAGAAGCTACAATGCTC CGTAGTTTGGTGTGTCTGTGTCTTCTATCTTCAGCTGTGCTCGGACAACA GGGGTAAGTACGAGCAAATCTCTTTGCGTTGTAATAACTTCCCAGTGGTA TCAGGAGTCGAAGTCCATATTTTTATGTTTGTATTAAAGAAAAGCGATTA ATCATAGAATGCTGTGGACTATGAAGACTATACACAACCAAAGCCGTTGC CTTCTTGGCGCCTTGAGCTAAAACTGGCAGTATGGCGCGGTAACATTCGT CGTAAGTAGTCGTACGCTTTTGATGTCGTAGAATTTTCAAGCTGGCTGTG ACAGAACCAACCGCCAACAAGGATTCTATATAAGACTTCCTCTTCGGTAA GAGGACAGTTGGATTTTGTACTTCACGTGCACGAGTCACGACTATTAGTC GAAGGGCCAAGCATCGAATATTCGATTCTACTTCCGGGTTTTTCTAAAAC GGCACAAGATCGAACATCGTTGACACGAGTAGCGCGGGGTGAGAGGCCAG GTTAGCTTCTGACGTTTGACCGTTTACCCGCAAAATAAACACCGAGGGCC GGTGATAACGATGAGATCAAGAAGATAAGGACCAATTTGAGCCCTTTTTG TAGCTAAACTCTCAATAATACATGTTTTTCTCCTGATAATTTGGCGAACA TTTGGGTCAGTATGCTAGAAACCATACTCTAGACGCTCATGTTTATTAAC GGCAACTGTTGTACAGAAGCTAGTATCTAATGTTTTGTGTCCGTCCAAAA ATAGGGGGTACCAGGTTAGTATTGTGTGGGAAAAAAAACTTCAAGTCGGG TCAGCTATAACCCCGGACTTTTAGCCTCACAACCACACACCATCCACCCT CCCCACCCTAGGCCTTCTCCCGTTATATTGATTTGTACATACCCAGCGGG AGAGGTAGACAGGAGAGTTTGACAAAGCATAGGTACATGTATATGGGACA GTGCATTGTTGCCGTACATGACTTTTATACACAACTTTCTAGTGACTACA CTCTGTGGCCGTGGGATGCCCGCAATTGGACACGGCACAAAAGGACTGGG TACGACACAAACTTCCGGGTACGGCAGGAAATTTGAGTGGGTACGGCAAA AATCACCGGGCACAGCACGAATTTGTAGCGGGTACGGCACGAATTACTAG GTACAGCATAAATGAGTTTTGTGGGGGTGTTATAGAGGCCCGCGCCCAAC ATCGGTCAGGGAGGAGCCAGTCACTTTCTCGGACAGTGGAGTTACGTTGG CATTACACAAACTAAATAAAGTCTGTGGTTAACAGATAAACATGTATGCA CTTTGTGACAGCTCAGTGTCATCACAATCAGCAGATTATTTCCACAGTCA GCAAAACCAAAGTCGATCTATATCTGTACGCGTAAATCCCATTACAAGCT GAGTATGATGTTGATCACAAAGCAAACAAGACTGTTCTTCACATATATAA ACAAAATGCTCAAGTTGACCTGCACCTGTTTACGTCTTTGAGTGTGAACA ACTCTAACAAGAGGAGAAGGGGGCTGTTTTATTGTATGAAATCACCGGGA GGACAAACTTACATAATGTTATAGTACAGAACAGCCTTATAGAAATTACC TGAGCGACCGCGTTCCAATGTACAACGCACAAGCAGCCGCGTCTTTAACA GAGCGAACATTACTACGCCATCAACCATTTACATCTACAATAAGCTAAAT GATCTAATTGAAGATAATGACTAATGTTCCTGGAAATCATGACACACGTT TGCGAAAGGTTTCAGGAACTCTACGTGCTTATCATATCGATTAAAGCAAG ACGGCCAGGTTCATTGGCTTCATGCTCACGGGGTAGAACGCGCGAGGAGC CGCGTCTTCATAACGGAGTGAACATTTTCTATATGAGTGCTGCGCTCCCC TATATTCAAGTCGACAATAAGCTATATATGAAACAAAAGCCATGGTTTCT AAAAATCAGGTCACGAATTGTCACGATGATTCATGAACTTAACATGCTTA TAACGCCGTTTAACTTTTGACCGCGAAGTTCCATGATTGCACGGAGAGCG ACCGCGCGCGCAGGTAGAACGCGCTAGGTGCGGCGTCTTCATAACGGAGT GAACATTTTCAGTATTCTACGTCGTGTACTCAAGTATCTAAATCAACATC AAACTACTTACCAATGGAAAGCTAAAGTTTGAGAGAATCAACATACAAAT CATAGGAGGGTTAGTGAATTCTTGGTGTTTACGACGCCGTGACAAAGATT AACATCAAGTCCCGTGGTTTCTGCTCCGCCGACGCGTTCGAATTGTGTTC GGAACGCGCAAGGCGCCGAGTCTTGTTTTTCAACAAAGTGAACATTTTCT ATACGAGTGCTGCGCTCCCCTGTTTTCAAATAAAGAATAAATTATATATC AAATGAAAGGTAAGATTTCTGGAAATCAGCACAAAGAGTTTCAAGAATAT TCATGAACGCTACATACCTGCTGCAAGCCATCCAAAATGGCGTAAAATAC GCAATGTTCAGTGGATAATTTCTTATAGTGTGACTCCTTAAACACCAATA AGTTTGCCACCGCTGAGCGCACCAATGCTTGTTCTTTAAGCATGCCAAAT TTCATGGAACTGCAGTCAACCAACTTTCTGCTAGGAGTGTTTAAGTAGAG CCTACTTGAGGGTATTTTCACGGGAGAGGCGCGTTGCGTCGTTTTAGCGT TTTAACAAAATAAGCGTGTTCTAGAGCGTTGGCCCTTCGACTATATCCCA AGATGACTTTGTGATCGTACGACGTTCGTGCGACGGATGTTCTCGCGCCC TGAAGATGTTGCGCGTTTCTCAATGCACTGTCAACCCTAGTCTCCGTTGC AGGCTTTCCAACGGCGATTTTTCATCTTTAATATCGGGGCCAGTTTTTTG GGGGGGCTGGGGGCCGTATCTGCTTGAGGACCCGTATCTGCTTGGGATCC TGTAACCGCTGTGATCCTGTATTAATAAACAGCTAACGAATAGTTGAAAA CTCGCCGTGGGAAAGTCTGCGACGGAGGCTATCGTCTGTCGTTGTTTCCA AAGTTCAGTCTCGAGTGGTCTCAGGGCTATTTACCGTGTCTGTATATGCA TGTGTGTTATTGATGTCCTTATATGGCAAATACAAACAAGAACAGCAAAC TCCAATTAAGCTAGCGGCTACTGACTATGTACCGTTGGATTTATAAGCAA GACTTTGTAGGGGCAATGCGTCGATAAAAGAAAGGCATCGGATCCTTACA TCTGTTTGGAGATTCAACTAAATGTATCTATCATAAGTTCATAACATTAG GGCCTTATAAAACTAACATCTTGTCTCCTGTTTGATTTTTCTCGAAACAT CCATAATCTTATCTCTGGGTTGTCCTCCGTTTTTTCGTCCACTTTACATG TGACGTTGATATATGTCAATTCACAGCGTTAGTTCAACATCAAGAGAGTA CGTAACGTTATGTAAATATATTGTGATTTTCATGATAAAGCATTGAACAT TAGATTCTCAGATCATCTCCCACTGAATTCCGAGATTTCTAGACAAATCC AAGTCTCGGAAATTTCTAGAGAAATATTAGTGTTCCTATGGGCGTCTTTT GAAGCGACCCCTCCCCCTACCCCCCACAATAGAATGGAACCGTCCCACCA TAACTTGGCCGCTTCTGAGAAACAGCATGGCTCGCGTCCCAGGCACACAC ACGTCTTCAAGTCACGTTCTAAGACTTGATCACGTGCAGGTAAGCGGGTT CTAGGTAACACTTACTTCCTGTCGTCTTCTGGGCGACGGTGATTGCGAAA ACTCGACCTCAGAGCCGAGTCAGAGGTCCTGGTTCAAACTCGACTTGAGG ATCCGAAGACTTTCCCAGTAATGTCATGGCCTCCGTCGGTCAGTATTGAC CAATATTGGTAACGTTAAAACCCTAATTCACATCAGCCCTACAGCATCGA CCTATGGCTAAACAGCCCTATACGAGAATGCACGGCAGTCTCTGCCACAT AAATCACATCTGTAAAGCTGACTCCGAGTTCTGTTGCAAACGTTCCCAGT AAAACTCCAGAATTTGAATCCACATGGAGATATTTGAAGAGTCACTAAGA TTTGCACAAACTTCCCGATATGCTATTATTTCATCGTAAGTACAGCCAGT AGGTACCCATCTGAGTAATGACTCTATGAGGCCGCTGTAGTGCCCTTTAG CGTGCTCCAGGCACCTCCTCGATCACGGGACCCCCATTTTACGTCCCTTC CGAAAGAAGAATGCAGCTCCAACCAATTAAGATGCCCCTGCCCTCCCCGG ATTCTATGAACAGTCAAATGTTGTCCAAGTCAGAAATTTACAAGAATTAA AAGCTGTGTGATTAAGACCTTGCCGTTTGTGCTCTGTTAGTTTTTCACTT TACTGATATCCGCATGTGAACTTATCGTAAACATTATCATAGGATAATGT CCTTGCAGGAACTAAAGAGATGGCAAACAATCAAATAGGCTGGAAAAACG TCAAATCAAAACCCATAGATTGACATTTATTAATGCCTTTTTCTGTTTCC CTAACCAAAGACAGGTATGAATCTGTAACAGTTAACTCCAATTTAAACTC ATTACCGTAAAATTTGATACTTTTTCACCAGAGTTGGGGTATTGAGAGGA TATCATCCCCCCAATCAACTTTTTACATCATAAAAATGTCTTATCTTTGT TGTTTATTTTTCAGGCCAGCTTATTTCATCTCTGTGCCGAACCTCCTGAA AGTCGGTACAGAGGAGACGGTCTCAGTCAACATCTTCAATGTCCCCAACC CAGTACGGGTGAAGGTTTACCTTCAGGACTACCCTGACAGAAAAACAACC TTCTCAGAGGCAGAGGTGGACGTCAACCAAGGTAAACTCAACATTCGCAA ACATACTTTTGACAAATATTTGAACAGTACACACAACAAAAGAGTTTGCT ACTCTGGGAGCTTTCGAGACAAACTCTGTCTCTTTATCAACCTGGTAAAG TCAGATCTTGTCTTGGAGTTCTCATGTCATTCACAAACATCTTCTGATTG TTTTTTAGGTAATTTGAGTGCTAGTAATTTGTGGAACAGTAATGCTCAAT AATGAAGTCGAACACAACAGTCCTTTAAGTACAAATGTATAAGTTAGGTA ATTGAATTTATTTTTGATTATAAGAATATAGAATTAGATAACTTCCTTAA CAAATAATTTTTTTATTACCATGTAAATTTATCTAAAAAAAAGGCCTCAG AAAGTATAGTAGCAGATCTATGTTACTATGTAAGGTTGGCATTATCATAG TTTATGTTCAAAATTGATATGCATCATTAATCATTATAATGTCTATTAAG ACAATTTAAACTCTACAGCAGGATAAAATGTGGAGATTTACTTCTGAACT TCCGGATGTTTTGAGTGACATCCATCACTCTTCTTCAGCTTCACTAGAAC AGGGCTCCAGACTAACTTTTAGGCCTAGGAGCACTGTGCTCCTAACTCAA AAAAGTTAGGAGCACCAGCAAAAATCTAGGGGCACCACTACAAAAAGTTG GAAGAACAAGCAAAAGTCTTGGCTATACCAAATAATACTCCTATTAATCA ATGTTATACGTTAACAACCGGGAATAAAGTATTTGAATAGATCATAAAAG ATAAAAACCTACATTGATGGTGCAGAACAATTGGCAATTCAATTCATTCA ATACCTTCCTACATACTGATACTAGTACGATGGATTTTTAGAAAAATTGG GCATAGGTTCCCCGGCTGGCCCCTATCCGGGGGCCACGGTGCCTCAAGTT CAACAAGTTGAAAAATACACAATGGTATTTTTTACTTGGAACAAGGCAGG CAATGATTCACATAACCTTGAATGATAAATAAATAGATGACTCTAGAACT TATCTATTGGGTTCATGACCAAAACAAATAAAGTCATATTCCATAATTTG AAACTTCACTGCTGGCATCAAGTTCAACATTTTTACAGGCATTTCTTTTC TTTTTACCCTCACCCTCTGTCTACAGATAATCCAAAATACTTTAATATCC TTAAAATTCTTGCTCAAAATAGTATCAAAAATGATCTGTTTGTGCCGACC CAGTCAAATCGGGAACTTCGAAACGCGTAGTTCAAATTTCCCGCGTCAGG ACCGCGCGGCGCCGTCATCCAATGACAGGCAGACCGCATGGGGAAAGCTT TGTGATTCGCCGCTGTGCAGTATAGACAGCAGCAGAATGAAAGTACATGC AGCACCATAACAACGGGCAGGTAATGAGCTTTGAAATGATACCGGTGACA AAAGGAAAATTTGATATTTTTTTAAATAAAACTCCACTTGAATTGATTCA TCAATTTTTGATCGTAAAAATCATCGCTTGAACAGGTATAAATATGACCG CAGGAAACAAGCCTTTCATTCTGCTGCGGTCTATTTTTCATAAACATCAT GGCCGCCATTGAAAACAGCGAGCGTCCGGCGAGCGCTCACTTTCATCGAC AAAGTTTTGACGTTTGAAACATTTTACAAATCAAACAAATACACCACAAA GGAGAGAAACTTATATCCTTTATTTCTATAGGTAACTTTGCCACTAGGAA CGGATAGTTTTTGTACCGCGGGTGTGGGAACATGATAGAAAATTCACCGA CGATATTCGCGGTAGCATTGGAATACCTATATTTTCGGCTTACCGCTTAG TTCTGCAGCCATTATCCTGGCGCAGGTCTTAATTTTGGATTGTCGCACCG TGCGACCGTGATTTTAAATCTAGTCGCATTCTCAAGAAACTGGTCGCATA CATATTGTGTGCGAGTCGCACTCACGAGCGCTGCTAGAATGAACTGGCAG AACGAATCAATACTACATGTAGTAGATCTAAGTTCTAACTTGTAAGGAAA CGTCCAGAAGTAAATCTCAAAATTTTATCCAGTTTTAGAGTTTGAATCGT CTTTATTGTTTACCTGGATGTCCAACCTTCATAAACGTATCATTAACGTC TGTTTATGAAGATGAGCCCAGCCTGGTGACAGTTCGGGTGAACCCCGACA ACCTCCCGGAGAGCACGGCCACCAAGCGCTATGTCTACGTGGTGGCCAAG TCAGACGATCCGCAGCTCACCTTCCAGAAGGAGGCACAGGTGCTGCTGAG TTTCCAGCAAGGCTACGTCTTCGTGCAGACTGACAAGCCGATGTACACTC CAAACCAGAAAGGTAGAATTAACCTTCTCCCTGCTGCCTAACTCTGTAAC CAATATGTCTTCGTGCAGACTGACAAGCCGATCTACACTCCAAACCAGAA AGGTAGAATTAACCCTCTCCCTGCTGCCTAACTCTGTAACCAATACGTCT TCGTGCAGACTGACAAGCCGATATACACTCCAAACCAGAAAGGTAGAATT AACCTTCTCCCTGCTGCCTAACTCTGTAACCAATACGTCTTCGTGCAGAC TGACAAGCCGATATACACTCCAAACCAGAAAGGTAGAATTAACCTTCTCC CTGCTGCCTAACTCTGTAACCAATATGTCTTCGTGCAGACTGACAAGCCG ATATACACTCCAAACCAGAAAGGTAGAATTAACCTTGTCTCTGCTGCCTA ACTCTGTAACCAATAGAGAATCAGGTGCCAAATGGCTATTTCAGTGTGCT ACTTATAATTAGGTTTTATGATATTTGCTCCTAGATTGTCAAGGCAAGCA AGCTCTTTGCATTTTTTGCTCCTTGAATTTTTTTTAGAAATCATTGTGGC AATGAACCTGAAGACCGTTTTCTTAAACTTCGAAGAATACTGTACTTGTG TATGCGTGGTATATTGTGTGTTACAACAGGTGAAAGGTGTTTGATATTTA CTGTGAAAAAGAATAAAAGGGCAATGACATAATTTTAAAACTGTCAAATG ATGACAATTTTTTGATACTGATGATAATTCCTCATTACACTTGTGCTAAC AATAGTTACATTTACTAAAGAAGAGCTATCATTGGCTATTTACCAATAAA AAATCACGCCTGTAGCCTGTTCAGAACACGAGCTATCAAAACCGGAAGTT CTACTGCAGTGCCTTAGAAAGCCAGAAGGGGGCCCAAAGTCTGATCGTAT CTTCATTATGCCAAGTCCTACCAGCAGACCAAATATCGTGGAAGATCCGT CCACGATTTCTAGAGTTATGCTCTTCACACGGTAAAAACATAACCTTCAT GACAATGAAAAGGTAAAAAGTGATACCGTAGTTTGTTTGTTTGTTTATTT TCCTCCCTCTCTCTTGCAGTGAAGATGAGGATCATGCCTCTGGACCAGGA CATGACTCCAGCCAGCCAGCCAGTGAG

Coding sequence (CDS) from alignment at Sc0000000:1498329..1506905+

>BlTCONS00000243 ID=BlTCONS00000243|Name=BlTCONS00000243|organism=Branchiostoma lanceolatum|type=CDS|length=483bp|location=Sequence derived from alignment at Sc0000000:1498329..1506905+ (Branchiostoma lanceolatum)
ATGCTCCGTAGTTTGGTGTGTCTGTGTCTTCTATCTTCAGCTGTGCTCGG
ACAACAGGGGCCAGCTTATTTCATCTCTGTGCCGAACCTCCTGAAAGTCG
GTACAGAGGAGACGGTCTCAGTCAACATCTTCAATGTCCCCAACCCAGTA
CGGGTGAAGGTTTACCTTCAGGACTACCCTGACAGAAAAACAACCTTCTC
AGAGGCAGAGGTGGACGTCAACCAAGATGAGCCCAGCCTGGTGACAGTTC
GGGTGAACCCCGACAACCTCCCGGAGAGCACGGCCACCAAGCGCTATGTC
TACGTGGTGGCCAAGTCAGACGATCCGCAGCTCACCTTCCAGAAGGAGGC
ACAGGTGCTGCTGAGTTTCCAGCAAGGCTACGTCTTCGTGCAGACTGACA
AGCCGATGTACACTCCAAACCAGAAAGTGAAGATGAGGATCATGCCTCTG
GACCAGGACATGACTCCAGCCAGCCAGCCAGTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000243BlTCONS00000243-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000243-exon-Sc0000000-1564993656:1498329..1498631BlTCONS00000243-exon-Sc0000000-1564993656:1498329..1498631Branchiostoma lanceolatumexon
BlTCONS00000243-exon-Sc0000000-1564993656:1503293..1503459BlTCONS00000243-exon-Sc0000000-1564993656:1503293..1503459Branchiostoma lanceolatumexon
BlTCONS00000243-exon-Sc0000000-1564993656:1505590..1505790BlTCONS00000243-exon-Sc0000000-1564993656:1505590..1505790Branchiostoma lanceolatumexon
BlTCONS00000243-exon-Sc0000000-1564993656:1506848..1506905BlTCONS00000243-exon-Sc0000000-1564993656:1506848..1506905Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1498329..1506905 +
Properties
Property NameValue
GeneIDBlCUFF000129