BlTCONS00000240 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000240
Unique NameBlTCONS00000240
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1485488..1486494+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000240 ID=BlTCONS00000240|Name=BlTCONS00000240|organism=Branchiostoma lanceolatum|type=mRNA|length=1007bp|location=Sequence derived from alignment at Sc0000000:1485488..1486494+ (Branchiostoma lanceolatum)
GTCGTGAAAATGTCTTCGGGGAAACTTGTCATGGACCAAGGTGAGTTATC
ACAGGAAACAATTTTTTTTACCAAATTTACCAAAATCTTTACCAAATCTT
CTAACCCGTTCCGTTACAATTCTTTGATGTAAGATAGCAAATTGTTTTTT
AAAACTCTTTTACTTCCCTTTCTGTTACTGATTGCACTTTTCCGAAAAAG
AGGAACTTCAAGGCGCTTTCTTTTAACTTTCGTCTCTTTCTATACATCGA
GGTTTCGGCCCTTCCCTGGCTGGCCTGGGCCTGACCCGGCCGTACAAGAG
GCAGGGCGGGCGGCGGACGGGACTGGTGCTCCTGGCGGGAGGCTGTCTGG
GCGGGGTGCTGGTGTGCGCCGTCCTCATGCCGCTGGTCTACGTCACCATG
TCAGAGATGCAGCAGGAGGTGACTGAGCTCAGGAACCTCGTGGTAAGGTT
CTGACTCAATAATTTCAATCTAAAGAGAGAAAAAAAACACTGTAGCTTCA
ATGTTTTCAAAGAATCGAACTTGTACTTTACTCACAACTGCGCAACAGCC
TGCCAGGTATTTCCGTAAGGAGACACCGGCCCTTCCCCAGGTTTTTGTCA
AACACAGAATCAAACAGAACCAACCAAACGTGACGTTAACGTATGGTTAT
GTCACCTGCAGGTCGCTTGCTTTGTCCGTCTGTTACGTTTGCAAACGAAC
TTGGTAAAACTATCCTCTATGAGAGCCCTCTTGTAACACGATGCGTGCAG
TAGGCCATTGCATTTGATTGTCCTAGTGACGAGAATGAGAACAATGAAAT
GAACGAGTCACGTACCGTTACGGATAATTAGTCTAAGGAGACGGACTACG
TGTTTCTATTTACTCCTCTTGCTTATATTTACTTCTGTACATGACACAAC
AGACCTCCCGCCCTGCCCCGACGGCCTCGCCTGGTACAGAGGCCCGACGG
AACGACACTGCTGCGGGCGGGGCGCACAGGGAGCGGAGACAGGCCGACCT
GACGCCG

Coding sequence (CDS) from alignment at Sc0000000:1485488..1486494+

>BlTCONS00000240 ID=BlTCONS00000240|Name=BlTCONS00000240|organism=Branchiostoma lanceolatum|type=CDS|length=336bp|location=Sequence derived from alignment at Sc0000000:1485488..1486494+ (Branchiostoma lanceolatum)
GTCGTGAAAATGTCTTCGGGGAAACTTGTCATGGACCAAGGTTTCGGCCC
TTCCCTGGCTGGCCTGGGCCTGACCCGGCCGTACAAGAGGCAGGGCGGGC
GGCGGACGGGACTGGTGCTCCTGGCGGGAGGCTGTCTGGGCGGGGTGCTG
GTGTGCGCCGTCCTCATGCCGCTGGTCTACGTCACCATGTCAGAGATGCA
GCAGGAGGTGACTGAGCTCAGGAACCTCGTGACCTCCCGCCCTGCCCCGA
CGGCCTCGCCTGGTACAGAGGCCCGACGGAACGACACTGCTGCGGGCGGG
GCGCACAGGGAGCGGAGACAGGCCGACCTGACGCCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000240BlTCONS00000240-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000240-exon-Sc0000000-1564993656:1485488..1485527BlTCONS00000240-exon-Sc0000000-1564993656:1485488..1485527Branchiostoma lanceolatumexon
BlTCONS00000240-exon-Sc0000000-1564993656:1485739..1485929BlTCONS00000240-exon-Sc0000000-1564993656:1485739..1485929Branchiostoma lanceolatumexon
BlTCONS00000240-exon-Sc0000000-1564993656:1486390..1486494BlTCONS00000240-exon-Sc0000000-1564993656:1486390..1486494Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1485488..1486494 +
Properties
Property NameValue
GeneIDBlCUFF000126