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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1466301..1473692+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000237 ID=BlTCONS00000237|Name=BlTCONS00000237|organism=Branchiostoma lanceolatum|type=mRNA|length=7392bp|location=Sequence derived from alignment at Sc0000000:1466301..1473692+ (Branchiostoma lanceolatum)
TGTTGATCACATGACCATAACTATTTGGACGCCTTCCGCCAGCTTACTAC
GAGGCTGGGGCGACCGAGTGGGGAAGAGAGTCGAGAAAAGCGGGGAAATT
TTGACCACTTTTCGGTGGACACTGGGTTCTGTGTGCTGAAGTGTTACTGT
GTGTGGCGTCTGTAAGCCTTGCACTGTCTTGAGACTTCTTTAGGAGGCGA
TCAACAGTGTGTTTGTACCGATTTTAAGGACTTTCGTCTGAGGAACCTAG
CGGGGGGACAACACAGCAACAACACTACCATGATGGAAGTCGAGTATCCT
CAAAACATGCCTGTCCCCACCAAGGTACGTGATTCTAACGTTGTCATTTA
CCAGGAGAAGACGAATTGTTGTTGTTGAGTCAGAAGATATGTTTCTTAAG
GTGTCGACGTAGTGTCATCACAAACCTGTGTTGTTATCTAGCGTACGTAG
TGTAGAAAGTGGGAAAACCAAGGGGGCGGAACCACTACCTTTACTACTGT
ACTGCTGGCGGTGATCTGAGGCCCGGGACTTGCCCCTTCCATAGCGGGAC
AGGGATAACAATTTCACTGCACAGTTTGTGTGAAAATGTTGGTTTATATG
ATGAAGAATCTAAGTACATTGTTGAGAATCGTGATCGGTGATTGTCTAGT
GAGGATTTCCTCAGTTCCCGTCAGGAACTTGTGGTTGTAGTTTTGTCGTC
AGCTGCTTTGGGTGATGTCTCCGGGTGGTACGATAAAAATAGCTCGTTTT
TCGCAGTTCCGGACTGTTATTTGGGTCCAGAAATCTCAGTAAGGTACCTG
AAGATGCCCTGATCGATATAATCGATGTTTTGAGGTTGACACACGCACGG
TTATGCCTGTGTTGTGATGATTTGATTGACAGCTGTCGGTTGGACTTTTG
TCCGCTCGGTCATTGCACAACCGGATTTACGTCACGACCCTCTCAAATTA
CCATGTGCGCACGCGCAGTGGGCAGTTCTGTCAGCGCGATTTTGCCGACT
CATGGTGGGCCTATTGAGGTGCCGAAAGGGGGCGATTTTTCACCAAAACC
GCCGCTAAAATCAGCCGTTGCGCTCTTCTAGAGGGTCACAGAAACTCCAG
GATTCGTGTGGGACGAGGACAGACCGAGAGGAGTCGTTCCAGCGGGCGTA
TGTCAGTTGTCGTGTGGGCTGCGTTCGGTGCCATGCCTGTCGCGCGGTTT
CCGTAACGTGCCCACTGCCCCCCTCCCCACACCTAGCCGGGCCCCAGCCA
GCCCAACCCGCCTGTCTCCGGCATTACGTCAGTTTCTACAAACAGACCGG
CCTCGACACAACCGTCATCACTTCAAGAACTGGAACCTTCCACCACGAAA
ACAAAAACAGCCCTCTTATTTTACCAGGAAAAGCCGCTGCGCAGTTCTTC
TAATGCCGGTCGAAGAGGCGAAAATGGAGTAGCACGTTGACCGAATTCGA
TAAGAGCCCTTTGTTCTGTGTCACTGCGTTTGTCTTTGTACTCAACGAGG
GGGGCTGAGAGAGAGAGAAGAAGAAAGGAAAGAGGAAGTAACGAGCTTTC
ATCCGGGTGACGTCCAGCAACCCTCCCGAGATAAAAATGGTCAAGAAACA
TTTCTACGACGGACTTGTTCAGCTTGCTATCTTGTTCAGTTTGCTGGGGA
CCGACATAAACTCGTACCTGAACAACCAAGACCTGAACCACCATGGGGCC
AGTCTGCACGAAATCATCCAAGGACAGAACCTTGCTCTGACTCAATCTCC
CAGTGCGTTCAACCCCAATCTTTTGACTGGATACCTGAATTTAAAATCGA
CGCACCATGACCGGTACGAGAGAGAGCGAGAGATTCTTCAGGAACTGCAC
AACCTCAAGCCGAGCTCCAAGGCTTTCCCGTTGGACATCACAGCCCTTTT
GTTAGAAGGAGGAGTGCAGACCGAAGGAACACATGTAACAGCTGAGGAAC
CGTCTTCAGAACAAGCAGAGCCGAACCTAGGAAACCCTGCAAATGTCGAA
GTCGAGGGCGCCACCGGTCCATCCCCTGTTGGGGATCTTACAAAAGAGGT
AGATTTGTCACCAAATTATAAAAAAATATCGTTAGAAGATAGATATTCTG
AAGGAAAATCCTGCAGGAATATTTAGCTGGTGAAATATGTGCTGTCCTTT
GTTTAGATTGGAGGGTGTCCTTTGTGTTGCTGGGGCCCATAATTTTGTTT
GCTTTCCTTCAAGTCACATGGCAGAGGGTTCCCACATGTAAGGGCTCTCT
TATAAAATGGTGTACAGGATTCTTTAAGAAATATCAAATTTAGTGTCTTG
CGATGCTAGCTATAGGACTTAATACATACTGTTGTGCATTTTATGTAAAC
AAAGGACTCCTTGTTTTGAATGTAACTCCAATGTAACTTATATCTCGTTT
ATGGCATGTTCTGGACCATGGCATGGCAAGATTTTGGCTGTTGATCCCGT
TTAAAGGTCACAGTGGTTAAAATTAGATAGACCTTGAAATAGTGTGAACA
TGTTGTCCTTGGTTAGAATTGGGACAGTTCCAGATGATGGATTTCTTGTC
TGTTGTTTACCTCGTTTTCTGGACTACAGTTATCATGTAAGGTGTAATAA
TTGGTCCTTGAAATATGATGAACACGTTTTCCTGGCTTAGAACTGGGACA
CTTCCAAATGATAAAGTTCTTCTCTGGTGTGGGCCCGCCATTTTCTGGAC
TACAGTTATTGTAAGGTGTGATGATTGGTCCAAAATTGCACTGGTGTTGT
GAAGGTGTGTCATAAAAAATGTAATAGCTCATTAACTGATACTTGTCAGC
TTTGATTTTACGTCTGTTCTTTGTGGTTCAAAGAAGCGAATCCATAAAAA
TATGTAGGATTTCCTTTTGTCTATCTTAAGTTTGCAAAACTGAAAGCAGT
AGTGGGTTCTAATGTAGAAGTGTGTAGGAAAAAGAACAAAGGAGAAGTAT
TGTTATTACTTCCTCCTGTGTTCTGTGTTCGTACAGGGCAGCTGTTCTGA
AACCAAAGCCTCATGGGAACTGATTCAATGTCATGTGATGGTTGCCTAGC
AACCAACAGGTGTGGCAGCCCCCCTAGGGCTTATGTATGTCTTATTGACA
GTTCACAAGTGCAACTTCTTTCCTCTCAACTTATGGGACAAAACAAAGAA
AAGGGACTTGTTGTAGACAAGCCTGTCTACCGTGCCTCGTGTGTGTAAAT
AGCCCAGGCAAACAACAGAATGGCTTTTATGTTGTTGCGTGACCGAGAGG
CAACGCCCATGGAACTAGGCCAAGTTGTCGCTGATCCCCATATGGCGATA
GACAGCAGCTGTTGATAGGAGAAGGGGTGTGGGTTTATGCAATCGGACAA
TTATGCGAGGAACGAATCTATTATTCTGTCATGCAGAAAACCAAGCCTCC
ACACCTTGCTCGCATAATATTATACTTTAGCACTAGTCTAGTGTTAACTT
TTAATGAAATCAACTTATATCTGGATTTGCTGAAGAGTCCACCTATGTTG
TTATACTGTAAAAGAGGTTTTATGTTTGCGTTTTTCACAGTGACCTCTTC
AGCGTGAATTTAAAACCACGACAAACATTTTCCCTTTTTGTGATAAACCG
CAGGCAGTTTCAACCACTAACTTAAAACCGCAGCAAAATACTACATTTTC
TCCCTATCGCAAAGTGAAATCCCCGTGAATATTTTCCCATTTCCAGTATT
TAAGACATCAAGATTTCAGTGTTATTCCAAAAGCCCTCTGCATGACCTAA
CTGAACAATCAGGCTTTTGTTACAAATGTACTATCTTCTTCCAATCCAAA
TTTGGCTGTTTTTCATCATTTAGTGTATGATATTGAACTTGAATCTTTCC
TATTCTCCCAGGACATGGACCTCATCAAGGTGTTGTGGCAGCAGGACATC
GACCTGGGAGCCGGTCTGGAGGTGTTCGACGCCGGGCTGCGACAGCAGGA
GCTGGAGAAACAGCGAGCCTTGGAAAAGGTAATGATAATGTTCAGGATGA
TTTCTGATTGTTATAATACTTCTATACTACCAGGCTTAGCTTGAAAGTTC
ATCTGTGTTGGTAGAACTAGAAGTCATTTCGGAAAAATTTTGAACCATAA
TTTTATACGCAAAAATTGGACTTACCCAAATTTTACCCAAATACTACCAG
GCTTTGAAAGTATATGTGCATGTTACGGTAGTATATCTTAGATGTTTTGT
GGAAGCAAGGCTAGAGTGAGTGAGTGTTACCTATGTAGAGTCAAATGTCT
AAGTGTTTGTTAGACTTTTGATTTATGTAATAAACATTGATAGGGGTCAT
TTGTATTTTCAATAAACCATTCATCATCATCACCCTCCAGGAAAAGGAGG
AATGCAGCAAGGCTCAGGAGTGGCAGGAAGGTGTGGACTACTTCGTGGAC
TCAGAGACAGGAGAACACATCCCCCTTCCTCCCAGACAGCCTGAGACGGC
TCCTCAGCAGGTGAGACAACATATTTGTCCTCCTTACTAGGACTGTCTTG
TCAGTGTGGAGCCTGCGGCCTGGGTTCGCACCCAGCCCTGGACATGACTG
GATAAGAGCCTCATTGTCCCATCTGCTCTTTGTATGAGAGAGCTTAAGGG
CATCAAACCTCTCCATGTAAAAGAACCCGACACACTAATCGAGAAGTGTA
AGGGCGACGCAGTGTGCTAGGCCAAAAATTTGAGCCGTAGCGAAGTTGCA
TTGCACTAGGTTCTGTTTTAGGTGTGTCTGTTTATGTATGTCTGTAGTCA
TTTGAAATGTCTGTAGTAATTTGAATGTAGTACATTGGTTGCTTTCTACA
TGTTAGGCATGTCAAGAACACTGACAGGAAGTGACAAGTTTAAAAGTTCC
CAGAATAGGTTATCTCATTTCCCGGGTAGGCCGCACACCTTAATGTACTT
CTTGACGCACTCCATCCAAGATTTTTTTTAAATCAATTTGTAAGGGCCTG
ATGTTGCCATCGATTTATGAAGAAAGGCGGCTCAATTGTAAGGCGGCTCA
ATTGGTACTGTAGCAGCATTTCTTCACCCTAGGTCAGAAATATCAATGCT
CGAGACAAGTATTGACTTCACTGACCCATTAGGAGAAGCAGGAGTTACGA
AGGCTGCTCGGGAAATTCCCTACTCATTTTTTTGGTTTTATACATGCTGG
ATACAACTACAACATGTTTACCAATGGTTTTGTTTTTCCAGCCTTCCACT
GAGCCTATCATGACGATGGATCAGTGTATGCAGTACCTACAGAACATGCT
TCCTGTACCAGTACCAGTACCAGAGTCAGAACAACAACCACAGGTTCCAA
GTCCTCCAGCTACGGTAAGTGTTTTCTCTGAAAGTTGCTTCCTCCAAATT
TAATTCTGCTTAATTTGTTGAAGGCTTTTAGCTAGTACTTGAAGACAAAA
TTGAAGGGAGTCCAAAAATTGAGGGGGACCGGGCATCCCCAAGGGAGTAG
GAGGGCAAAAAGATTCGCAGTAATTTTATGATCGCTGCGAAGAGCTAACC
GCAAAAACCTTGAACATAAAACCACCACAAACATTTTTACATTTACAGTA
GCTTCGTAGAATGATTACTGTTTTATTGTGGAATCTACAAATCTGTATAT
GTTTAGAATTTGTTGTTTGATTATCACTGAGCGCCTTGTGTCCTGTGTTT
ACAGGTTCCAGATTTGGACCAAACGCTGCAGGACTTAGCCAGTATTGAGG
AACTGGGGTTGGGCCTGCCACAACAATACAGCTACAGCCACAACACACAA
GGTATGGGGACTTATATCTATTCTCCCCTTTCGGGGATCTCTCCAGAAAT
ATAGAGCAGTATGGGGGGAGAGTGGTGCATGTTGTGACATGTTGTAAGGG
ATTACATTCATCATTTCGGATGGTGACGTAGAGCAGACAGCCTCATGTAT
GAGGTAACTTCAGGCATAAGCCTCAAGCGTCAAATCTCTGCACGTAAAAG
AACCCAACATTCTTATCAAGAAGAGTAGGGGTGATCCGGTGGGTTCGGCA
AAAAAAGTGAGCCGTAGCAAAGCCGCATTGCACTACCACTAGCTTACTTG
AAAAAGCTTTACCTTTAGAATGAGCACTGAATTCAGACTTTTATGTATTG
TTCTCCAGACACTAGACACAATAGATAACAACCCTACGGCCTCAGATTGA
AAAAGGCTATGGGACTACAATTCCTTTTTGTTTTACCTATAACAAGCGCT
AAATTTAATGCTTCATGTGTCATTCTCCAGACACAGTAAGCCAGCCCAGC
CCAGTGTCCAACATCAACACCAACGTCAGCCTGGTGAACGCCATCAACGC
TTCTCTGGACGAAGGCCTGCTTCCCCCGGCCGACCTGCCCAGCGACGCAC
AGAACCTCACACAGGTAGGAGGAAACAACAGCAGTGTTCTCGCCATGCCT
TTTCAGCATAGGGGCCCCCTATGGTGTGATTTTGATCCCCTACGCTGCGA
TCCCCTATGCTGCGATCTGTACCCCTATGCTGGTTGCAGTGTTTCTTTCT
GGGGAGAACCTTGTGACCCTTCCTAAATCTTATAAAAAGTTCATATTTGG
CTTTAGAATGAGGCTGTGACAGAGGTTTGCGGCAGCATTATAGTCACATA
ATGCTACAATATTGGACAAAAAAACCCAACCGCAAACATTTCTACATTTA
CAGTATTCTAGGTACATGTGCATAAATCTACACAGGTAGGAAAAACAACA
GTGGTAGTGTGTGTGGGACCGGTGCAATGGCCTAAAGGGTAGAGTGTTCG
CCTTGCATATGGCAGGTTGTGAGTTCGATCCCCGCTCAAATCATACCAAA
GACTTTAAAAATAACAATTTCATTGATTTATTGGTTTGGTTGTTCAGGAC
ACACAGCCAGGGCTGCCCAACTAGCCTGTTGCTATTACAAAGGGCTAGCC
CTGCTGACAAAGACAAGGCATCACATTGGAATTAGACATGTGCAGCAAAA
CGAGCTATAACAATATTCTAGTAACATGTACATAAATCTACAATACCCCG
TTTTTAAAATTTGTTGCCATTGTTGATTCCCCAGATGAATTGAATTAAAA
AAAGGACATCACAATGGAATTAGACATGGGGACCATATCAAGATATAACA
ATATTCTAGTTACATATATATAAATCTACAATACCCTGTGTTTTAAATTT
GTTGCCATTGCAGCGCTATAGTCACATAATGCTACAATATTGGACAAAAA
CATAAAACCATCGCGAACATGTCTGCATTTACAGTATTCTAGGTACATGT
GCATAAATGTACGCTGTTTTAATTTTGTTGCCATTGTTGATTCCCCAGAT
GCCCCTCATGGATAACTTCGACCTGAACATGACGCAGCTTCTCCTGAACA
CCGACCCTTCTGAGTTCGACCAGCTGCTGTCCGGAGGGATGT Coding sequence (CDS) from alignment at Sc0000000:1466301..1473692+ >BlTCONS00000237 ID=BlTCONS00000237|Name=BlTCONS00000237|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at Sc0000000:1466301..1473692+ (Branchiostoma lanceolatum)
ATGATGGAAGTCGAGTATCCTCAAAACATGCCTGTCCCCACCAAGGACAT
GGACCTCATCAAGGTGTTGTGGCAGCAGGACATCGACCTGGGAGCCGGTC
TGGAGGTGTTCGACGCCGGCAAGGCTCAGGAGTGGCAGGAAGGTGTGGAC
TACTTCGTGGACTCAGAGACAGGAGAACACATCCCCCTTCCTCCCAGACA
GCCTGAGACGGCTCCTCAGCAGCCTTCCACTGAGCCTATCATGACGATGG
ATCAGTGTATGCAGTACCTACAGAACATGCTTCCTGTACCAGTACCAGTA
CCAGAGTCAGAACAACAACCACAGGTTCCAAGTCCTCCAGCTACGGTTCC
AGATTTGGACCAAACGCTGCAGGACTTAGCCAGTATTGAGGAACTGGGGT
TGGGCCTGCCACAACAATACAGCTACAGCCACAACACACAAGACACAGTA
AGCCAGCCCAGCCCAGTGTCCAACATCAACACCAACGTCAGCCTGGTGAA
CGCCATCAACGCTTCTCTGGACGAAGGCCTGCTTCCCCCGGCCGACCTGC
CCAGCGACGCACAGAACCTCACACAGATGCCCCTCATGGATAACTTCGAC
CTGAACATGACGCAGCTTCTCCTGAACACCGACCCTTCTGAGTTCGACCA
GCTGCTGTCCGGAGGGATG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000237-exon-Sc0000000-1564993656:1466301..1466624 | BlTCONS00000237-exon-Sc0000000-1564993656:1466301..1466624 | Branchiostoma lanceolatum | exon |
| BlTCONS00000237-exon-Sc0000000-1564993656:1470162..1470235 | BlTCONS00000237-exon-Sc0000000-1564993656:1470162..1470235 | Branchiostoma lanceolatum | exon |
| BlTCONS00000237-exon-Sc0000000-1564993656:1470658..1470760 | BlTCONS00000237-exon-Sc0000000-1564993656:1470658..1470760 | Branchiostoma lanceolatum | exon |
| BlTCONS00000237-exon-Sc0000000-1564993656:1471492..1471614 | BlTCONS00000237-exon-Sc0000000-1564993656:1471492..1471614 | Branchiostoma lanceolatum | exon |
| BlTCONS00000237-exon-Sc0000000-1564993656:1471955..1472051 | BlTCONS00000237-exon-Sc0000000-1564993656:1471955..1472051 | Branchiostoma lanceolatum | exon |
| BlTCONS00000237-exon-Sc0000000-1564993656:1472531..1472664 | BlTCONS00000237-exon-Sc0000000-1564993656:1472531..1472664 | Branchiostoma lanceolatum | exon |
| BlTCONS00000237-exon-Sc0000000-1564993656:1473599..1473692 | BlTCONS00000237-exon-Sc0000000-1564993656:1473599..1473692 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1466301..1473692 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000124 |
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