|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1444821..1449669+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000235 ID=BlTCONS00000235|Name=BlTCONS00000235|organism=Branchiostoma lanceolatum|type=mRNA|length=4849bp|location=Sequence derived from alignment at Sc0000000:1444821..1449669+ (Branchiostoma lanceolatum)
GCGACGCCGAATGGCGGGTCAGTCGTGGAGGGGGTCGGCCGGGCACACAC
AACCAAGTCGTACCGGAGTCGGGAAGGTGTGAGAGTTGTCGTCTCACGGG
CGCTGACAGATCGCACTGATAACGTCGTCAAGAAGAATGTCTTTGTCAAG
ACGTCTTGTCTGAAGTGAAGAATACGCTATAAGAAGCTGTGACGACCGTG
AAGGATAAGAGACTAACTCTGTAAGAAGCAACTCCTTAGTGGTACTCCTT
AGTGGTACGTCTTGCGGTATATCACTAAAGGAGTAACATCGCTACTCGAG
AAGAGGTCGTCTAAAAGTAGAGAGAGTCCCGTCAGGTGACGCTTGTGGCG
GGAGTCGGACGAAAATCACAGACTTTAAGACATTCGATGAAAGAGACGTC
TCTGCCAGGTGTTGCCAAGAAGGAGGCTTGAAACCAGGATGTGCAGATGG
GGATGCACAACCACGGACACGGTATGTACACGTAACACCTTAACATAGCT
TTACTACAAGACCTTCTTCTGGGGGTAAGGGATCGTAAAATTCGGCAAAA
AAGTTCAATAATGGACCAGGAGAGTCAGTCCTCGGTAAGGTTAACATTTC
CCCCTCGGAGCCGACTGCGTCTGCAACTGAAACCCCATGGTGGCTAAACT
TTTCCGGCAAATATTCTCCCTATACTATAGCTGGTGTTGTTAGTCTAGCT
GAGACTAGGTTTACCTGTTTTGTACGAGAGGTTTAATTCAATGGTCGTCC
AATTAGTACTCCATGTTTAAACTTGAACCCTCTGCCGATTCACGGGCACA
CGTATCACAACTCACGGCTGTTTGGTGCCACAGCAAAAGGTCTCGTTGTT
TTGTTTGTTGATCTAAACGATTTTTTCTGTGTGACCTGAACAAAACACCT
TTCTGTGAAGTTAACCAGGTGTTATTCCTTACATAACTTGAGAGAACGAA
CACAATTTTTAAGGAAGTCTGTCTTCTCACGAAACGCAGGAAATATCTTA
TTCATTGCTGTATGATGAGTTGCCCGCAATGCTTTCTTTTCAGACTACTT
CAAGAGAAAGGTACACATGAAGATGTGTGGGTAGCGACACTGAACAAATG
TTTCTATGATCATTAGCTATTTACCCATGCAAATAATAGCTTGAAAGACA
GCACAGAAGAAAAATATTTTCCTTTCACGTTGGATCGTACATGTTTTAAA
GATACGAGGTTACCGACGAAAGTAAAGCGTATCCTGAACGATATTTGTTG
TGTATAACGGTATAAAGGTCATGTACTTTGGCAAGAACGTTATCATTAAA
TTTGTCTAAATATGCCAGCGGATCTAGCCCCGTATTTAGTTAAGACCAAA
CCCTTGTAAGCCTCGATGTTTGTTTAATCCTAATGCAAACAGAGTAGCGA
CGATAGCAACCTTATAAAAGTCATAACACACAAAACTCTCCGTCAAAAAC
ACGCCATGAACTTTGTCCCTGCTCACGTCTTACTTGTACGTGTTGGCATT
TGTGGCGGTGATTCTTCTATTGAGAAATGGGATAAATTGCTTAAAAACGA
CCCGGAATTCGCCTGAGAAAACCGTCGACTGTTGTACAATGGAACACAAC
ACCTGGGTTAAGAATACACGGCCGCGGTTGTTATGACATAATTGAGTAGA
CCTAAAAACTAGATACAGAACACGGCCTAGGCTTGTCGCAAGTGGGTCAG
GACATCGTTTACTAAACAAGTTTCTGTACACAAGTAGAAATTCTCAATTA
TAGCCAAGAAATCAGTTAACAAACACCAGGTAGCTAACAGATTCTAAAAA
CAGTTATTGGCCCGATTTACATACAGGTTTTTGGAGACAAGTCGGGGCTG
TGTGTGGGGAGCTTTGGGCTGCTTAAATTGAGTTTCCCTACTAGAAAACA
CTATTTGAATGGCCTATGGTTCTCCTTGCACAGTCCTGAGTCGACTCCAA
AAACTTGTGTGTACGCGTAAATCGGGCCAAGATATAACTATTTTTAAGAG
CTGTTAGCTACCTGTTGTTAGTTTGCTGACTTCTGGACTGTAATTGAGGA
TTTCTACTTTTCAAAAACGCGTGTGTAAGTCGGCCTATTGTTGTCAATTT
TCCCTGCAGTAAAAGAACAACACTACAGTACTTTGATAACGTACTTTGAT
CCGGACGTATCGTTTTCCCCATGTGTTTGCCGGGTATTGCATTCAGCTAA
AAGCCACTTCACAACTGTGTAGTGCTTGTTAATGCTTTACGCCCGGCTGC
TAAGTAAAATCTGAAAAGTGTACGTGTGAAAGGAAGGTTGCTATGTTAGG
CCTGTCAGTGTATGTACGGATATAAATCAACTTCGGGTATGACTAAAAAA
GTTTCAATGGTAATTAGACGTAAGTTGTATCACATGCTCTAATGTCAAAG
AGGAGTGCATTCTGACATTGTGTTTTCAAGATATTAAACCCAAGTTAAAG
GTTTTTGAAAAGTTTTCAAGTTTTATTTCTTTATCATTCCTCGAAGTATT
GGTATGGTGTTTTGAGTTTAATTCGAACTTGTGTTTCTTTTGAGTTGCCT
TGTGGTAAAGTCTTCTTAAACAGTTGGTTTTCTTAGGAAATTGTAAAGAA
AATTGTACAATTTTTGGTTCGTTTCTGCGATCTACCATACCACTGTGAAA
CATATACGTAAGCCTACACGTCTCATATTTACTTAGACGTGTACAAGGTC
GCATGGGTTGTGTATTACCAATTCTTTGGTTAGGGTAAAGTTTGCAAGGA
AGAATGTATTTTCTACTTTGACCCACCGTTGTGCAGTCGAACCGAAAAAA
TCACTTTTTCGTCCGCAAAGTTGACCTAAACAAAGCACAAATGTGAACGG
GCCCAAAGATATGTACAAGGTCGCAACAGGCCATATGTAGAGTACAGAGG
TGGGGTGGACATACAAATAGGGCCGTACCACGGGTATATGGACGGGTACA
CCTGATATGTAACCTGACTCGACGCGCGGTCACTCAGGCGTTTAGAACAC
AGCTGGAGGTGCAGCAACACGACCCGCCGACAGGTGTCGCGTTTCCACAA
CCAGTGTCGTTTGCAATTGTGGAGAGTGACATTGAGGTTTAAGAGTGTCT
GAATCTCCAAAGACCAAGGCACAAAGAACTCCAAGACGAGATCTAATTTT
ATTACCGGGTTGACGAAGAGACAGAGAATTCGTATCGAAAGCTCCCCAGA
GCAATCTTTTTTATGTTGTGTGTAATGCTTAAATGTTTGTCAAAAGAACT
TCATTGGTCACAAGTCTCTGACCAAACGAGGCAGGCAGATCACAAAACAC
GTTTTGAAACGAATGACGCTTCAGAGCGTACTATCTAGCTCCGAGTAGTC
AAAAACGGAAGACCCGTTTTCAAGTGTGCTTTAGAACCGTAATCTCCAAG
CAGATCTATCGATGGCAAGGCAGTATCCCAAGATTGGCCCTTTTGATACT
GCCTTGCCACCGACAGATCTGCTTGGAGATTATTTCAGAGCGTACTTATC
AGGTACTATCAAGCCGCGAGAGGTAGAAAAACAGGCGACCATTTTCAAGG
GTTTTCTTTTTGTATGTTCTTCCAGAGCTTCATGTGCCGCTACTGTGGGA
CCCGGTACTGCAAGGAGTGTCTCCATGGAGAGTTCCCGGGCGAGATGAAG
GCACCGGACATATGCCGCATGTGCAATCAGGTAACAAATCGCAAGAGGGC
GTCTTTGAGCGTGAACAAGTGCATGAACGTAGCAGTCACGGGGAGTCTCT
CGGAGGCCGCAAAATAGAACATTGATAATATTTCAATATATAACACTGAT
CATACAAAATATTAGACAGGTGGCAGACACAGCCAAATCATTAATATTGT
TCTGTTATGATGAAGTATTTTTTATATGTTTATGAAGGTTAGACATCCAG
GTAAACAATATATAAAGACATTTCAAACTCTACAACTGGATAAAATTCGG
AGATTTACTTCCGGACGTTTCGAGTGACATCCATCACTCTTCTAGTGACG
CTGAAGAAGGATGTCACTCGATATGTCAAGCAGTAAATCGCCGAACTTTA
TCTAGTTGTAGAGTTTGAATTGTCTATATATAAATTATTTCTTATGTTTC
GTTTTTTATTTGTTCCAGCCGAACTGTCAGGGCCAACGGGTAGAATACGT
CCCTGGGCACGAGTACCCTCGAGAAGGGGACAAAAAGCGCGGCAAATCCG
GCAAGAAATCGGGCAAAAAGGGCAAGAAGTCGGGGAAGAAGAAGGGCAAA
AAATCCGGGAAGAAAGGAAAGAAATCTGGGAAGAAGAAGAAAAAGAAGTA
GAAAGAATTTTCTTGTGTCTGGTCTAAGCTGAAGACTCTCTCATTATCGT
CATCATTCGTCTCGTTCCCAGAGTACTTGGTACGGCTAAGTATTGGAAAC
CATATTTATCGTCATCATCATCATCATCATCATCATCATCATCGTCACAA
TATCTATAACATTATGAATGATAATAAGTTTGTAAATGACTCTATGTACA
TTCTAAGTGAGAAAACGTATATATAATCTACATTAACATCAATCCGCCGG
TTTACATAAATCTGCCACATTGAAAAACAGTGAGTTTGAGTGATCTCTAG
TGCAGCATCCCCCACAGTTTATATATACAGGAGTGCATTATACTGGGGGA
CGTTGGGTTGGGGATCTGTTTGGACGTATCTTTTCAGGGTGGCGGAATTA
TGTACCCTGGTGGAACTACGTTAGTATATGTTAAATGACTCTATGTACAT
TTTAAACTTGTGTTTGTAACCAGTAGTGGCCGTTGTCTATTTATAGTATC
AGCAAAGTGATGTGGCAAAAAACAGGGTCAGAGGTCAATGGCAATGTGT Coding sequence (CDS) from alignment at Sc0000000:1444821..1449669+ >BlTCONS00000235 ID=BlTCONS00000235|Name=BlTCONS00000235|organism=Branchiostoma lanceolatum|type=CDS|length=321bp|location=Sequence derived from alignment at Sc0000000:1444821..1449669+ (Branchiostoma lanceolatum)
ATGTGCAGATGGGGATGCACAACCACGGACACGAGCTTCATGTGCCGCTA
CTGTGGGACCCGGTACTGCAAGGAGTGTCTCCATGGAGAGTTCCCGGGCG
AGATGAAGGCACCGGACATATGCCGCATGTGCAATCAGCCGAACTGTCAG
GGCCAACGGGTAGAATACGTCCCTGGGCACGAGTACCCTCGAGAAGGGGA
CAAAAAGCGCGGCAAATCCGGCAAGAAATCGGGCAAAAAGGGCAAGAAGT
CGGGGAAGAAGAAGGGCAAAAAATCCGGGAAGAAAGGAAAGAAATCTGGG
AAGAAGAAGAAAAAGAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000235-exon-Sc0000000-1564993656:1444821..1445291 | BlTCONS00000235-exon-Sc0000000-1564993656:1444821..1445291 | Branchiostoma lanceolatum | exon |
| BlTCONS00000235-exon-Sc0000000-1564993656:1448396..1448500 | BlTCONS00000235-exon-Sc0000000-1564993656:1448396..1448500 | Branchiostoma lanceolatum | exon |
| BlTCONS00000235-exon-Sc0000000-1564993656:1448939..1449669 | BlTCONS00000235-exon-Sc0000000-1564993656:1448939..1449669 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1444821..1449669 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000123 |
|
