BlTCONS00000233 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000233
Unique NameBlTCONS00000233
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1439227..1440715+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000233 ID=BlTCONS00000233|Name=BlTCONS00000233|organism=Branchiostoma lanceolatum|type=mRNA|length=1489bp|location=Sequence derived from alignment at Sc0000000:1439227..1440715+ (Branchiostoma lanceolatum)
CGGAAAGGAGTCTGACGCCTGGAACGACACGCTTCGCCGCAAGAAGTCCA GCGGTGACTCTAGTCTGAACGGGTTCAGCGATGTGGGAGATACGAACGAA TACGATGGGAGTCGGAAGAGATACAGTATGACAAGCAGTGGATCCAGCGC TACAGTCACGTCTACGGGAAGCGAGGGCGAGGGGACCATCACTGGAGTAG ATGTCAGCGGGGACGGAGCTTCGTCCTCCGCGTCTGAGAATCGGAAGAAA CGCGATCCAAAAAAATGGATGAGTAAGAGACGAGCTGACATCAAACATTT CAGTCGACGAATCAGCGTTGACTTGACAAACTCTATCAAGGCGTGGAAAG CGCAAGAAGAAGAAGAAGAGGAGAACGAACAACGTGTCCATCCCTGGGAC GAAGTTGCCACCAAAAGGTACGACTTTGATTTGGATAAAGTCTCAGAGAT AAACACCGAAGACTCGGATGACCAATATGAAACAACACCAAACGGCGGTA GCCAAAATGGCGACAGCGGCAGCCAAAATGGCGTCAATGGCCGCGTAAGA AACCGACGGGTGACATTTGACAACGTCAGCGACAATCTGAGGGGAATGAA CATCCAGTCAGAAAGCGAGGACAGCGAAGCCGAGACGAAGCAGTCAGGTG TTACCGAAGCGTCTCTTCCGAACGGAGACGAATCCGACGGAGACCCGAAA CTTTCCGACGACGACGATCGAACCGACGAAGATGACGTCATTGATGGCAA CGCCGTGAACGGATTGCCGCCTTATATTCAAGGATCGACGAGAGCCACGA AATACGTGCCTCGGAAATGGTCCCGCTTCAAGGCGAACTTTAGCCCGCAG AAAAACGAGAGGAAAACAATGGAATCGGAAAACGCGGAACGCTCGAACTA TTACCGCGGCCGGCGATTTAGCATGTTTTAGAAACACAGAGAAAATGTTG TTTACGGATACATCTTTTATCAAACGTATTGTATCCACAGATAGAATTAT GAATACAGTTAAGGTGAAATAAGTCGCGATGGACCTTATCCATCTTCTAC GATTTTGAAGCATAAGTTATTGTATGGGCATAGTGTTGTATGCCGTGTCT CGTTTGTTGGATAATGTTTTTTGTTTTAGAGATATTCAGAATTATTTTGC ATATCAGCAGTATATTACGCTGAATGTAATATGAAGCATTCTGTATATGG AGCTGAATTTTGATTTCTGCTGATCATATCTTATTTATGGACGGATACTG AGCAAGACATCAAGCTATATGCACATGTGTTGAAATCAAAATATCATATG AATAGCTTTAGGTCAAAAGCGTTGACACAATATCAAATCAGAAGCAGATT ATATCCTTGTTACTTCATGTGTGCTTATTTTATACTCATGCAGCAACAAC AATAAGTTACATTTGCATTCAGTACAAAATTCAAGAACGATTGTTATATT GAGTTCGGGCTATTCCATTTTATACGATGGTGAGGGGAC

Coding sequence (CDS) from alignment at Sc0000000:1439227..1440715+

>BlTCONS00000233 ID=BlTCONS00000233|Name=BlTCONS00000233|organism=Branchiostoma lanceolatum|type=CDS|length=930bp|location=Sequence derived from alignment at Sc0000000:1439227..1440715+ (Branchiostoma lanceolatum)
GGAAAGGAGTCTGACGCCTGGAACGACACGCTTCGCCGCAAGAAGTCCAG
CGGTGACTCTAGTCTGAACGGGTTCAGCGATGTGGGAGATACGAACGAAT
ACGATGGGAGTCGGAAGAGATACAGTATGACAAGCAGTGGATCCAGCGCT
ACAGTCACGTCTACGGGAAGCGAGGGCGAGGGGACCATCACTGGAGTAGA
TGTCAGCGGGGACGGAGCTTCGTCCTCCGCGTCTGAGAATCGGAAGAAAC
GCGATCCAAAAAAATGGATGAGTAAGAGACGAGCTGACATCAAACATTTC
AGTCGACGAATCAGCGTTGACTTGACAAACTCTATCAAGGCGTGGAAAGC
GCAAGAAGAAGAAGAAGAGGAGAACGAACAACGTGTCCATCCCTGGGACG
AAGTTGCCACCAAAAGGTACGACTTTGATTTGGATAAAGTCTCAGAGATA
AACACCGAAGACTCGGATGACCAATATGAAACAACACCAAACGGCGGTAG
CCAAAATGGCGACAGCGGCAGCCAAAATGGCGTCAATGGCCGCGTAAGAA
ACCGACGGGTGACATTTGACAACGTCAGCGACAATCTGAGGGGAATGAAC
ATCCAGTCAGAAAGCGAGGACAGCGAAGCCGAGACGAAGCAGTCAGGTGT
TACCGAAGCGTCTCTTCCGAACGGAGACGAATCCGACGGAGACCCGAAAC
TTTCCGACGACGACGATCGAACCGACGAAGATGACGTCATTGATGGCAAC
GCCGTGAACGGATTGCCGCCTTATATTCAAGGATCGACGAGAGCCACGAA
ATACGTGCCTCGGAAATGGTCCCGCTTCAAGGCGAACTTTAGCCCGCAGA
AAAACGAGAGGAAAACAATGGAATCGGAAAACGCGGAACGCTCGAACTAT
TACCGCGGCCGGCGATTTAGCATGTTTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000233-exon-Sc0000000-1564993656:1439227..1440715BlTCONS00000233-exon-Sc0000000-1564993656:1439227..1440715Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000233BlTCONS00000233-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1439227..1440715 +
Properties
Property NameValue
GeneIDBlCUFF000121